Heatmap: Cluster_196 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Ovary
Microspore
Generative cell
Pollen
Sperm cell
Pollen grain
Pollen tube
Pollen tube (1.5h)
Pollen tube (3h)
Pollen tube (9h)
Pistil
Style (before flowering)
Style (after flowering)
Style (pollinated, after flowering)
Flower (buds)
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Pericarp/Exocarp (4 DPA)
Pericarp
Pericarp (5 DPA)
Pericarp (7 DPA)
Pericarp (10 DPA)
Fruit (mature green)
Fruit (breaker stage)
Septum (7 DPA)
Septum (10 DPA)
Septum/Seed (4 DPA)
Seed (5 DPA)
Seed (7 DPA)
Seed (10 DPA)
Seeds (10 DPA)
Seeds (20 DPA)
Seeds (30 DPA)
Seeds (Pk-stem)
Seeds (Br-stem)
Seeds (Pk-equatorial)
Seeds (Pk-stylar)
Seeds (Br-stylar)
Seeds
Seeds (RR)
Seeds (LR)
Seeds (MG-equatorial)
Hypocotyl
Seedling (leaves)
Seedling (roots)
Callus
Meristem (vegetative)
Meristem
Apical meristem
Leaf
Root
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root hair cells
- - 0.48 3.09 -2.07 - -3.98 -4.41 -4.76 - - - - 1.53 -0.11 -0.48 - - - - - - - - - - - - - - - - - - - - - - - - - -7.16 - - - - - - - - 1.3 - -6.36 - - - - 5.35
- - 3.19 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -0.96 - - - - 5.6
-2.75 -3.18 -3.12 0.84 -2.7 - - - - - - -7.88 -3.4 -4.05 -5.7 -4.14 -3.07 -1.76 - -4.4 -5.27 -3.31 -4.12 -5.59 -5.27 - -3.6 -4.41 -5.4 -4.77 -3.91 -4.55 -3.66 -2.41 -3.36 -4.93 -1.66 -3.39 -3.21 -1.95 -3.21 -1.74 -2.63 -1.59 -4.37 -2.51 -5.41 3.6 1.96 -2.26 -3.05 -6.13 -2.82 3.18 -3.62 -4.62 -1.39 4.7
- -4.78 -6.13 2.45 -4.18 -2.2 -3.64 -1.48 -0.98 -1.16 -1.08 -0.81 -5.8 -3.56 -6.07 -3.79 1.47 -0.25 - - -6.83 - - - -6.98 -4.57 -3.24 - - - -5.27 -5.12 -4.02 -3.92 -1.08 -3.53 -1.47 -3.45 -1.72 -1.27 -3.72 -2.09 -0.33 -0.68 -3.77 -5.47 -3.81 -2.9 -4.13 -2.76 -2.02 - -6.99 0.27 3.57 2.79 -4.75 4.42
-5.32 -2.22 -4.35 -4.92 -5.81 - -6.51 - - - - - -8.63 -7.2 -7.07 -3.52 -4.42 -2.37 - -3.36 -7.98 - -7.63 -6.76 -7.52 -7.64 -4.25 -4.66 -6.99 -6.1 -7.77 -6.05 -5.38 - - - -3.46 -4.35 -4.72 -3.93 -3.72 -3.36 -3.37 -1.87 -5.88 -1.73 -4.62 3.29 -1.91 - - - -3.4 0.36 4.49 -0.58 -6.37 4.42
-1.61 -2.31 -2.96 -0.44 -2.83 - -4.13 - - - - - -3.54 -6.97 -4.81 -6.79 1.15 -1.04 -1.17 -4.13 - -4.95 - - -5.02 -0.17 -1.52 - - - -5.48 - -6.17 - - - - - - - - -6.63 - - - -3.99 -6.62 -0.91 -2.9 -3.37 -4.48 -4.93 -4.84 -3.58 4.46 2.74 -3.37 4.45
- - -5.23 -2.83 -2.58 -4.51 -6.19 -3.65 -4.39 -4.78 -5.27 -4.64 -5.61 -7.85 -6.99 -5.14 -6.75 -2.32 - - -4.86 - -5.21 -6.43 -5.9 - -6.07 -5.32 -6.76 - - -6.77 -6.57 - - - -1.99 -5.87 -3.53 -2.74 - -3.5 -4.53 -3.49 - -2.8 -6.17 3.44 -0.85 - -0.61 - -4.58 3.01 -4.23 -6.1 - 5.16
- - 2.09 - - - - - - - -0.78 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 5.73
-4.35 - -2.79 -2.15 - - - - - - - - -1.85 -1.22 0.61 0.35 - 0.22 - - - -0.6 - - - - -2.68 - - - - - - 0.02 -1.02 -3.11 -1.69 -1.77 -2.78 -2.06 0.38 -1.44 -1.26 -1.75 -1.66 -4.66 - 0.7 3.06 - - -2.97 -2.07 0.18 - - - 5.14
-4.62 - -3.98 0.77 -5.13 -3.74 -4.2 -2.99 -3.13 -3.66 -3.54 -3.54 -7.03 -6.85 - -8.17 -0.68 -5.79 - -4.12 -6.71 - - -7.67 - - - - - - -6.36 -6.66 -7.6 - -2.77 - - - - - - - - - - -4.55 - -0.74 -3.16 - -4.69 - -5.54 -0.66 4.07 3.39 1.38 4.54
- - -6.41 -1.7 2.81 -4.8 0.62 -5.35 -5.29 -7.37 -6.17 -7.56 -3.69 - -6.74 - - -6.87 - - - - - - - - -6.91 -6.39 - - - -8.11 - - - -4.79 - - - - - -8.67 - - - -6.26 -7.28 2.57 -4.44 - - - -7.43 0.99 3.55 1.07 -5.69 4.75
- - 1.78 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 5.77
-2.6 - -3.92 - - - - - - - - - -2.28 -4.59 -2.44 - - - - - - -0.98 - - - - - - - - - -4.82 - - - - - - - - - -3.8 - - - - - 1.8 -0.81 - - - - 1.92 2.14 - -2.57 5.47
1.24 -0.82 -2.69 -0.05 - - - - - - - - -3.28 - - - - -1.27 2.59 - -2.63 - - - - - - - - - - - - - -0.76 - - -0.0 - -0.75 - -1.49 -0.38 1.66 -0.53 1.37 -3.73 0.18 0.64 - - - -1.48 2.32 2.33 -0.78 - 4.57
- - -0.73 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -4.19 - - - - 5.84
- -2.07 - -4.9 - - - - - - - - -5.48 - - - -1.31 -4.28 - - - - -4.82 -5.32 - - -5.81 -5.29 - - -5.05 -3.76 -3.19 - -0.92 -2.64 - - - - - -7.22 - -1.88 - -0.93 -3.33 3.51 2.12 - - -3.89 -2.81 3.05 1.22 -2.68 - 4.84
-2.54 - 0.72 1.06 - - - - - - - - -1.84 -0.75 -1.18 -1.73 -2.52 -0.12 3.1 -3.52 -3.02 -1.78 -4.29 -1.91 -1.14 -1.93 -2.85 -2.86 -3.33 -2.04 -2.44 -1.86 -3.67 - -1.79 -2.46 -0.09 -0.41 -2.21 -0.89 -1.21 -1.58 -1.18 -2.17 -2.37 -0.92 - 2.62 -4.23 -3.86 - - -4.11 1.73 3.06 1.07 0.4 3.77
-4.34 -4.93 -7.24 -1.18 - - -5.56 - - - - - -2.98 -4.71 -3.27 -2.82 -2.09 -0.68 -5.14 -4.39 -3.97 -6.86 -5.19 -5.32 -5.15 -2.45 -3.77 -2.99 -3.27 -4.18 -5.65 -5.18 -7.93 - - -4.68 -4.97 -4.43 -3.92 -2.45 -2.93 -2.36 -2.86 -3.89 -1.57 -4.3 -6.2 3.22 0.02 - -4.64 0.85 -2.81 2.73 2.19 -2.29 - 4.93
- - -4.38 0.75 - - - -4.66 -3.89 - -5.28 - -2.39 -3.7 - -5.02 1.21 -1.7 - - -0.78 - - -5.48 -4.65 -3.49 - -3.01 - -1.33 -2.37 -4.95 - - - -2.34 - -2.56 - - - -3.21 - - - -1.28 - 4.07 -1.67 - - - -2.02 2.75 -1.2 - - 4.72
-0.6 -0.86 -0.65 -1.34 - - -3.94 - - - - - 0.16 -2.26 -4.77 -3.25 -1.28 -1.2 -1.11 -0.75 -2.07 -0.87 -2.43 -2.82 -2.63 -3.03 -4.19 -2.33 -1.21 -1.14 -2.18 -2.2 -2.9 -1.35 - - -3.19 - - - -2.15 -5.01 - - - 1.86 0.77 2.16 -1.5 -2.48 -3.99 -0.16 -0.23 0.86 2.48 -0.66 - 4.82
-1.25 0.5 -1.32 0.43 -2.64 - - - -2.87 - - - -0.98 -1.83 -2.63 -4.44 - -4.8 -3.13 -2.39 - - -4.8 -4.71 - -2.71 -2.93 - - - -4.49 -4.13 -3.8 -1.78 - - - -3.54 - - - -4.1 -2.6 - - -2.66 -4.67 -2.28 -0.97 -1.25 -1.62 -2.74 -2.55 -3.36 - -1.83 -1.42 5.61
- - - -1.23 - - - -5.24 - - -2.71 - -2.15 - - - -2.31 -1.73 - - - - - -3.03 - -0.03 -1.96 - - - - -2.58 - - 0.88 0.88 - -0.21 0.75 -0.76 0.75 0.65 -0.25 - - - - 1.77 -1.0 -1.36 -0.39 - -2.14 1.89 -1.73 - - 5.13
- - - - - - - - - - - - - -8.18 - -4.52 - -2.81 - -6.31 - -4.57 - - - - - - - - - - - - - -3.35 -2.0 -5.53 -2.54 -1.37 -2.54 -2.37 -2.51 -2.5 -4.7 - -4.73 -0.83 -6.3 - - - -4.19 2.23 - - - 5.66
- 0.14 2.9 2.14 0.56 - 3.73 - - - - - 2.16 - - - - -1.04 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 0.62 0.51 - - - - 4.48
- - - -2.61 - - -5.42 -6.69 -5.12 - - - -5.67 -6.48 -5.97 - -2.78 -5.22 - - - - - - - - - - - - - -7.86 - - - - - - - - - - - - - - - -2.6 -4.93 - -5.91 - -10.32 1.23 4.56 0.11 - 4.92
- - 4.49 - - - - - -1.52 0.99 -1.73 1.06 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.95
- - -2.49 1.25 -2.74 - -2.99 - -8.21 - - - -2.12 -5.34 -6.4 -5.39 -1.33 3.23 -2.49 -3.44 -1.73 - -3.29 -3.62 -3.61 - -5.21 -0.7 -1.14 -1.15 -3.37 -3.1 -4.15 - -2.16 -3.54 - - - - - -4.01 -2.67 -2.63 - -2.13 -5.33 2.37 -3.25 - - -4.61 -3.9 0.52 2.61 -2.72 - 4.83
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 5.86
-1.35 -1.29 - -2.73 - - - - - - - - - 0.34 -1.17 -0.25 - -1.08 - - -2.84 - -1.53 -4.28 -2.56 - - -0.01 -2.19 -2.11 1.55 0.67 -0.2 0.06 - - - - - - - -4.33 - - - -1.49 - 0.63 -1.5 - - - -3.24 -0.24 2.89 - -2.36 5.11
- - -1.6 -0.12 - - - -4.04 - - -6.46 - -0.57 -2.03 -0.17 -1.9 - -0.52 - -2.01 - - -1.51 -1.87 -2.14 - - - -2.93 - -2.0 -3.59 - - - -2.1 - -1.06 - -1.62 - -3.51 - - - 3.54 -1.71 -0.91 0.14 -2.6 - -3.03 0.1 3.02 -0.05 -0.98 0.52 4.66
-4.96 -4.83 -2.7 2.19 -1.43 - -0.58 -5.88 -7.86 -6.21 - -6.65 -1.81 -2.22 -2.39 -2.66 -2.26 -2.24 -2.52 -2.13 0.33 -1.75 -2.72 -1.76 -3.26 -5.18 -3.07 -1.07 - -4.55 -2.47 -3.36 -2.2 -1.36 - - -3.25 - -2.16 -1.29 - -2.87 -3.17 -2.12 -2.32 -2.73 -6.36 2.86 -0.06 -2.76 -3.0 -4.1 -2.73 0.58 -3.49 -1.98 -2.28 5.11
- -5.93 - -0.78 0.19 - -4.43 -9.26 - - - - -6.84 -7.59 - - -4.37 -2.05 - - -5.36 -2.29 -4.31 -3.88 -5.53 - - -5.71 - - - - -6.66 - - -5.06 -4.31 -3.16 -2.27 -4.78 - -2.91 -2.2 -3.23 - -2.85 -5.85 3.04 0.99 - - - -3.67 1.76 -5.76 - - 5.35
- - - - - - - - - - - - - -6.35 -5.33 -7.37 -3.78 -3.21 - -6.93 -5.77 - - -5.82 -7.61 - -5.27 -5.66 - - - - - - - - -4.23 -4.79 -2.58 -2.35 -4.17 -3.33 -2.32 -1.54 - - -5.32 3.43 -3.72 - - - -4.28 2.0 - - - 5.38
- - - -2.32 - - - -3.21 -3.48 - -5.23 - -2.09 -4.02 - -4.14 -2.08 -0.27 - - - - - -5.31 - - - - - - - - -5.56 - - - - -3.23 - -2.54 - -3.06 - - - 0.27 - 3.54 1.05 - - - -3.63 1.02 -0.22 -3.47 - 5.24
- - - - - - - - - - - - - 2.02 - 1.81 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 2.58 - - - - - - - - 5.47
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 5.86
- - - -3.43 - - - - - - - - -4.67 - - - - -7.06 - - - - - -7.83 - - - - - - - -6.42 - - - - -4.28 - - - - -6.43 - - - -2.26 -6.22 2.79 -4.36 - -3.59 - -8.13 0.98 - - -3.93 5.6
-2.92 - -2.01 -1.63 -2.5 - - - -6.78 - - - -2.51 -5.38 - -2.26 -4.41 -2.22 - - -5.01 - - -3.55 -4.24 -2.15 -3.01 -3.34 - -4.18 -2.99 -2.41 -3.06 -1.62 -2.81 -3.15 - - - -1.94 -1.43 -5.02 - - - - -3.27 2.61 -3.07 -3.46 -4.02 - -3.86 1.45 4.22 -0.12 - 4.66
-2.41 - 0.13 0.94 2.25 - -0.73 -5.39 -4.97 - -4.96 -5.79 -1.14 -1.21 -1.52 -1.32 -3.08 0.54 -2.27 - - - -4.52 -5.45 -3.66 -1.82 -2.76 - - - -4.19 -3.61 -3.29 - - - - -3.16 - -1.49 -1.05 -1.64 - - 0.74 -0.09 -2.35 2.96 -2.43 -1.57 -0.76 -0.33 -0.34 2.26 2.44 -3.63 -3.73 4.33
- - - - - - - - - 1.12 1.48 1.37 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 5.66
- - - 1.44 - - - -3.9 - - - - -0.62 - - - - - - - - - - - - - - - - - - - -2.31 - - - - - - - - -3.19 - - - - - - -0.66 1.01 2.12 - -5.8 0.29 2.46 - - 5.34
-3.13 -0.99 -4.33 -0.71 - - - - - - - - -2.05 - - -7.4 -2.02 -5.25 - - -4.38 - -5.38 -3.86 -5.46 -5.12 - -4.88 -4.18 -3.91 -2.18 -2.28 -2.64 -3.07 - -3.11 -1.32 -2.33 -2.87 -1.79 - -1.97 -0.87 0.34 -4.03 -3.3 -7.07 2.83 -0.16 - - - -6.41 1.75 - - - 5.34
-2.77 -3.16 -1.09 2.98 -1.75 - -3.14 -7.02 -7.55 - -7.86 -8.13 0.35 0.42 0.53 0.63 - 0.21 -2.8 -4.04 -3.85 0.8 -5.31 -5.6 -3.96 -6.52 -3.07 -5.47 -4.52 - -7.13 -4.54 -5.43 0.66 -0.35 -1.13 -0.43 -1.79 -2.6 -0.28 -1.28 -0.83 -1.97 -1.56 -0.66 -5.47 -2.83 -5.4 0.65 -3.68 0.85 0.53 1.09 -2.05 -5.85 -4.48 -4.74 4.66
- - - -3.27 -3.35 - - - - - - - -4.08 -4.76 -4.78 - -3.13 -1.76 - - -5.85 - - - - - - -4.7 - - - - - - - - -3.36 - - - - -6.58 -3.27 -2.23 - -3.58 -2.9 2.53 -4.44 - -2.34 0.4 1.37 2.67 -3.6 - - 5.33
- -8.74 -9.06 -8.5 -2.2 - -2.53 - -10.58 - - - -9.28 -6.63 -6.05 -5.97 -8.58 -8.67 -7.01 -8.23 - -7.36 -6.29 -7.17 -8.53 - - -7.14 - -8.84 -10.83 -8.75 -9.15 -4.95 - -8.8 - - - - - -11.8 - - - -4.38 -6.77 0.03 0.29 - - -9.0 -8.47 2.63 1.5 -0.0 -0.03 5.47
- - - 1.86 -2.22 - -2.81 -6.14 - - - - -3.71 -4.45 -4.23 -3.0 -3.08 - - - - - - - - - - - -3.1 - - - - - - - - - - - - - - - - - -4.35 1.12 -0.71 - -3.29 - -6.45 2.23 4.4 2.41 -2.76 4.27
-3.22 - -0.3 -2.11 - - - - -8.63 - - - -0.7 -0.33 -0.33 -0.35 -0.2 -0.55 0.27 -1.34 -3.05 -2.19 -5.57 -4.63 -3.61 -2.23 -2.19 -3.33 -1.86 -3.14 - -4.59 -4.32 - - - - -5.39 - -4.65 - -7.13 - - - 1.87 -0.94 2.88 -2.98 -1.03 -1.35 -0.53 -1.03 1.75 2.51 -3.95 -5.01 4.72
-2.57 -1.53 -4.31 0.08 0.77 -5.1 -1.92 -2.95 -2.64 -2.55 -2.34 -2.69 -3.57 -2.86 -4.67 -4.38 -1.55 -5.15 -3.01 -2.42 -3.53 -7.05 -2.65 -2.77 -3.95 -4.55 -7.15 -2.2 -4.83 -3.25 -2.16 -2.52 -3.06 - -1.79 -6.22 -3.93 -5.06 -3.44 -3.94 -2.85 -6.01 - - -5.6 0.13 - 1.47 -0.97 -0.93 -1.03 -3.33 -2.96 2.11 2.37 -0.94 -0.61 5.09
-5.62 -6.48 -4.81 -3.24 -4.9 - -5.61 -9.81 - - - - -2.72 -4.82 - -8.68 -5.19 -6.86 -5.33 -0.71 -5.17 - - -5.47 -4.63 -4.81 - -4.03 -6.77 -2.87 -4.54 -2.11 -3.87 - - - - - - - - - - - - -7.41 -4.32 1.11 -3.61 -6.43 -6.41 - -5.67 1.86 0.55 2.15 3.13 5.15
- - 2.44 - - - - - - - - -0.76 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 5.7
- - - - - - - - - 0.99 0.8 1.41 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 5.69
- - -10.86 -4.26 -8.45 - - - - - - - -6.67 - - - -10.44 -8.45 - - - -7.74 -10.87 -10.16 -10.9 -5.42 -10.99 - - -9.84 -8.71 -8.02 -9.07 - -8.4 -4.87 -8.55 - - - - -7.1 - - -5.71 - - - -3.88 -11.06 -10.04 - -10.0 1.54 4.31 0.84 -3.51 5.05
- - -11.44 -5.62 -9.04 - - - -12.36 - - - -7.26 - - - -11.02 -9.04 - - - -8.32 -11.45 -10.74 -11.49 -6.0 -11.58 - - -10.42 -9.29 -8.6 -9.66 - -8.98 -5.45 -9.13 - - - - -7.68 - - -6.3 -3.08 - 1.35 -4.47 -11.64 -10.63 - -12.28 2.65 4.54 1.71 -2.19 4.47
-4.46 -2.09 -3.58 -3.51 -6.76 -5.9 - -8.06 -8.0 -7.66 -7.43 -7.52 -2.64 -4.54 -3.78 -5.03 -1.64 -1.39 - -5.25 -1.3 -7.68 -2.83 -1.06 -0.84 -0.91 -1.67 -1.02 -0.63 -0.46 -0.37 0.27 0.64 3.15 1.16 1.83 -2.0 -1.85 -3.17 -1.91 -1.43 -0.49 -2.08 -1.39 0.8 -2.86 -3.58 1.64 -0.54 -4.46 -4.92 -3.23 -2.73 1.41 3.42 -1.4 -2.57 3.5
- -0.41 - 3.15 2.76 - -0.41 - - -2.35 -2.3 -2.42 - - - - - - 2.03 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.45 - - 5.06
- - 3.71 - - - - - - 2.23 1.44 1.52 - - - - - - - 0.61 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -0.53 - - - - 5.02
- - - 1.52 - - - - - - - - -6.14 - -7.54 -4.93 -4.32 -4.1 - - - - - -6.11 -7.36 - - -4.56 - - - -6.6 -7.31 -4.26 -5.0 -5.78 -5.1 -6.04 -1.73 -1.74 -3.06 -3.01 -1.83 -1.7 -4.11 -4.18 -6.11 1.79 -4.42 - - - -5.97 0.14 4.35 -2.41 -5.76 4.81
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Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.