Heatmap: Cluster_156 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg cell
Ovule
Uninucleate microspore (Col-0)
Uninucleate microspore (Ler-0)
Pollen (bicellular, Col-0)
Pollen (late bicellular, Col-0)
Pollen (bicellular, Ler-0)
Pollen (tricellular, Col-0)
Pollen (tricellular, Ler-0)
Pollen (mature, Col-0)
Pollen (mature, Ler-0)
Sperm
Pollen tube (Col-0)
Flower (receptacles)
Flower (floral buds)
Flower (sepals)
Flower (petals)
Flower (stamen filaments)
Flower (anthers)
Flower (carpels)
Flower (stigmatic tissue)
Pedicel
Axis of the inflorescence
Silique
Silique (senescent)
Pods of siliques
Pods of siliques (senescent)
Embryo
Endosperm
Seed
Seed (young)
Seed (germinating)
Seedling
Seedling (etiolated)
Meristem
Stem (internode)
Stem (internode, senescent)
Stems
Leaf (rosette)
Epidermis cells
Mature guard cells
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root (apex)
Root (stele)
Root (QC cells)
Root (tip)
-6.19 -0.46 -5.41 - -4.3 - -3.59 - - - - - - -1.61 1.61 1.21 -5.41 - -5.57 -2.8 -3.02 0.69 -1.88 1.7 -5.62 1.96 -0.77 -0.29 4.37 - -0.47 -1.08 1.59 -4.34 -2.63 0.7 -2.65 -0.09 0.37 0.49 - - - -4.54 -3.54 - -4.79 -
-4.3 -2.63 - - -7.08 - -6.39 - - - - - -3.18 -0.81 1.99 4.2 -0.95 2.12 -4.44 -3.27 -5.83 -1.41 -2.13 1.66 -3.5 2.56 -3.47 -0.27 2.68 -5.12 0.97 -5.48 -5.81 -6.44 -7.05 -5.47 - -1.1 -8.22 - - -3.48 -4.82 - - - - -
- - - - - - -3.27 - - - - - - -4.26 - - - -3.84 - - - - - -1.09 4.04 -1.48 -4.37 -0.69 2.79 4.11 -5.29 0.19 -5.14 -5.6 -5.56 -2.47 - 1.39 -6.09 - - - 0.53 -3.8 - - - -5.5
- -3.25 - - - - - - - - - - - - - - - - - - - - - 2.0 - -2.05 - - 5.45 - - - - - - - - - - - - - - - - - - -
- - - - - - 3.38 - - - - - - - - - - - - - - - - 4.45 - 0.21 - - 3.69 - 0.81 - - - - - - - - - - - - - - - - -
- - - - - - - - - 2.5 3.27 - - - - - - - - - - - - 4.41 - 3.08 - - 1.59 - - - - - - - - - - - - - - - - - - -
- -1.27 - -1.25 - - -1.13 - - - - - - 2.71 0.85 - - -2.54 - -0.51 - - - 1.03 -2.63 0.27 3.23 3.94 1.89 - 0.23 -1.47 -3.06 0.52 - -1.22 - 1.04 -6.0 - - - - - - - - -
AT1G71120 (GLIP6)
-10.77 -8.2 -5.02 -4.11 -4.32 - - - -7.02 - - - -7.39 -5.26 -4.03 -5.17 - -7.14 -3.73 -7.37 - -3.58 - 2.17 -4.09 2.38 -4.98 2.29 5.02 -6.46 -6.15 -8.33 -5.43 -7.79 -7.93 -2.77 -3.36 -6.25 -4.28 -3.84 - -4.69 - - - - - -
AT2G02100 (LCR69)
0.28 2.34 -9.17 -8.34 -5.83 -9.85 -6.76 - -10.28 -10.77 - - - 0.05 -0.59 -0.3 -2.19 -3.48 -2.07 2.1 -2.64 1.61 1.66 1.57 -3.36 0.36 -4.22 -0.7 2.51 -4.1 2.14 1.06 0.6 0.73 2.17 -1.85 -3.72 0.51 -2.79 -4.21 -3.37 -0.53 -5.45 -8.28 -2.1 - -9.9 -8.23
-1.73 -0.55 - -2.06 - - -1.11 - - - - - -0.36 - - - - - - -2.69 - - - 1.98 -2.41 1.05 - 0.29 3.12 - -2.59 1.44 -0.9 0.86 -0.8 -2.14 -2.32 -2.83 -4.0 - - 0.85 0.51 3.48 1.11 - -0.73 2.51
- -6.32 - - - - - - 2.73 - 3.77 - - - - - - - -4.17 - - - - 1.21 -1.96 0.03 -2.75 -0.92 4.34 0.53 - 0.23 -4.46 -2.63 - - - -6.37 -6.4 - - - -1.54 - - - - -
AT2G10535 (LCR29)
- - - - - - - -1.08 -0.65 -1.88 1.28 - - - - - - - - -3.11 2.97 - - 3.65 - 3.41 - 1.9 2.84 - - -2.23 - -2.61 -0.53 - - -6.37 - - - - -0.45 - - - - -1.63
-2.7 1.29 -8.69 - -6.18 -7.11 -8.58 - -8.58 -8.56 -7.2 -4.38 - -0.13 1.75 1.31 1.35 1.24 1.42 -0.28 0.26 -0.42 -1.36 1.38 -3.06 1.63 0.45 -0.39 2.84 -5.58 -0.59 -1.69 -0.79 -0.46 -2.49 1.53 1.67 -0.67 -0.36 -4.11 - 0.65 -1.4 -3.08 -1.03 - -4.08 -4.07
- - - - - - - - - - - - - - - - - - 2.0 - - - - 3.47 - 3.43 - - 4.47 - - - - - - - - - - - - - - - - - - -
-0.89 - - - - - - - - - - - - - - - - - - - - - - 3.06 - - - - 4.72 - 3.67 - - - - - - - - - - - - - - - - -
AT2G23410 (CPT)
-6.18 -5.0 - -5.37 - - -3.8 - -6.74 - - - - - -5.3 -7.38 - - - -9.95 -6.49 - -6.3 0.55 - -0.62 - -0.51 3.73 -8.22 -8.82 0.51 -2.07 -0.25 -6.82 -6.25 -3.85 -5.31 -8.08 - - -5.37 -0.06 1.16 3.13 - - 4.1
AT2G33233 (LCR49)
- 1.35 - - - - - - -4.04 - -3.71 - - -2.2 - -2.55 - - - -4.3 - - - 4.1 -4.07 3.6 - 1.51 3.25 - 1.29 - - -4.6 -6.46 - -3.84 - - -1.27 - - - - -2.58 - - -
0.26 -0.88 2.2 0.32 2.62 3.08 1.2 -0.31 -1.54 -0.61 - 3.61 0.42 -0.59 1.22 - - - -1.98 -2.05 - - -2.87 -0.82 -2.12 -1.93 -0.92 - -1.61 -4.71 -3.73 -2.95 -4.12 -1.72 -6.69 -2.85 -3.03 -3.16 - -2.66 -2.68 - -2.77 - - - -3.53 0.05
AT3G04945 (LCR18)
- -3.58 -0.47 - - - - - - - - - - - - - - - - - - - - 3.49 - 3.25 - 0.84 4.57 - - - - -2.04 - - -0.44 - - - - - - - - - - -
- -2.33 3.23 - - - - - -0.2 - - - - 1.98 - - - - -2.32 -1.13 - - - - - - - - 4.7 - -1.48 - 2.26 - -1.83 - - -1.22 0.15 - - - - - - - - -
-1.43 0.25 -0.63 -1.03 -0.95 -2.03 -1.25 -6.12 -6.99 -7.8 -6.01 -5.2 -4.71 0.26 -0.43 1.67 0.2 -0.12 0.82 0.34 0.58 1.53 0.62 0.95 -1.14 1.42 1.13 1.35 0.76 -1.42 -0.18 1.59 0.55 0.71 -0.81 -0.09 0.05 0.61 0.18 -0.74 -2.09 0.14 -0.97 -1.41 -2.07 -0.74 -13.09 -2.39
AT3G26744 (ICE1)
-2.32 0.41 -4.41 -2.7 -4.06 -3.52 -2.52 -2.48 -3.68 -5.66 -5.75 -12.31 -4.23 -0.68 -0.75 -0.92 -1.04 -1.33 -1.46 0.31 -1.04 -0.56 -0.23 0.4 -0.68 -0.25 -3.12 2.26 2.1 -0.87 0.09 -0.21 -1.05 -1.1 0.2 -2.47 -1.67 -0.19 -1.4 -0.75 4.2 -2.62 -2.52 -1.97 -2.99 -1.64 -0.08 -2.58
-2.32 -1.81 -0.68 -2.09 -1.15 - - - - - - - -1.91 -1.54 - - - - -4.0 -5.09 -2.19 - - 3.4 - 2.27 - -0.95 4.68 - 1.36 - -4.47 -3.83 -4.29 -1.05 -2.23 -2.03 -3.97 - - - - - - - - -
-6.99 -8.11 - - - - - - - - - - - - - -4.27 - - - - -4.62 - -4.28 4.66 - 3.54 - 0.11 3.25 -6.0 -2.03 - - - - -3.25 - - - - - - - - -4.16 - - -
- - - - - - - - - - - - - - - - - - - - - - - 0.38 - - - - 5.55 - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - 2.81 - - - - - - - - 4.71 - - - - 3.89 - - - - - - - - - - - - - -
0.55 1.7 -2.41 - -0.28 - - -0.81 -2.73 - - -6.06 0.54 0.63 0.3 -1.79 - - - -0.74 - - -0.0 3.39 -1.13 2.54 - -0.24 2.17 - 3.14 - - - -2.4 -1.36 -0.03 -2.55 - - 0.87 - -1.28 - -1.27 - - -2.45
AT3G45130 (LAS1)
-2.06 -0.05 -5.55 - - -5.73 -6.31 -1.86 -4.28 -4.47 -5.63 - -5.05 -3.72 -0.82 -2.29 -3.9 1.49 -3.16 -5.62 - -3.71 -4.78 2.16 -3.09 2.64 2.05 1.17 3.39 - -5.95 -1.95 -1.9 -1.48 -4.13 -2.64 -0.92 0.47 0.79 - - -0.77 1.3 0.59 1.02 - - 1.72
-0.28 1.39 -5.62 -5.17 -5.68 - -5.83 - - -9.53 -8.05 - - 0.89 0.78 0.07 -0.26 -0.74 -2.47 0.83 -0.53 0.09 0.23 1.51 -2.48 0.9 -0.9 0.59 2.96 -3.16 2.0 0.25 -0.2 -0.01 -0.39 -0.52 0.25 0.14 -0.42 -3.52 -1.02 0.7 0.69 0.56 -0.14 -4.06 -6.46 -0.13
- - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-7.27 0.01 -2.25 -4.94 -3.34 -6.26 -4.94 - - - -5.03 - - 2.43 0.76 - -6.18 - 0.93 -0.22 -2.02 - - -0.06 0.55 -0.36 4.25 -0.03 0.88 - 0.98 -0.49 -1.05 0.63 -8.26 -5.99 - -5.62 0.18 - - - -5.92 1.6 -0.14 - -3.55 0.61
AT4G00220 (JLO)
3.42 -1.14 - - -4.36 - - - - - - -2.64 -5.12 -1.46 -1.83 -1.15 -0.24 -1.43 -5.84 -2.5 0.14 -1.26 -1.87 2.08 0.51 1.27 -1.74 0.46 3.64 1.35 -2.62 -0.72 -1.02 -0.28 -1.76 -0.17 -2.55 0.39 -2.89 - - 0.35 -0.91 -4.23 -0.42 - - -4.14
1.08 4.52 0.86 - - - - - - - - - - 1.94 1.98 - - - 0.17 1.45 - - 0.89 -0.28 - 0.42 - - - - 1.3 - - 0.71 -2.28 - - 0.19 - - - - - - - - - -
- -5.11 - - - - -0.81 - - -3.48 - - - - -0.78 - - - - -3.19 - -2.28 - 2.11 1.31 1.35 - 0.27 4.53 2.71 - 2.02 -1.68 0.35 - -1.84 - -2.63 -4.42 - - - - - - - - -
- -7.04 - - - - - - - - - - - - - -3.49 - - - - -3.71 - - 4.69 - 3.46 - 1.91 2.79 - -5.28 - - - -6.65 - -2.57 - - - - - - - -4.39 - - -
1.5 1.33 - - - - - - - - - - - -2.15 - -2.7 - - - -1.06 - - - 3.58 0.29 3.63 - -1.57 3.9 - -0.25 - - - -5.4 - - -6.02 -3.4 - - - - - - - - -
- - 0.84 - - - - - - - - - - - - - - - - - - - - 3.54 - 4.16 - 2.43 3.44 - -1.06 - - - - - - -4.19 - - - - - - - - - -
-2.17 2.06 -0.65 -1.03 -1.21 -1.62 -1.37 -5.63 -5.61 -5.28 - - - 1.29 -0.01 0.23 -0.14 0.04 -2.33 1.68 -0.09 0.85 1.05 0.43 -1.94 0.46 -1.12 0.84 2.64 -1.1 0.59 -1.5 -0.34 -0.7 -0.25 0.97 0.5 0.84 -0.42 - -4.83 -0.45 -0.03 0.99 -2.58 - - -0.62
AT4G32770 (VTE1)
0.82 0.43 -3.43 -2.8 -3.33 -3.8 -2.98 -1.77 -2.69 -3.9 -3.89 0.4 -2.67 -0.27 1.28 1.33 0.17 -0.79 0.32 0.02 -0.13 0.05 0.23 1.06 1.52 1.42 1.68 0.16 2.53 1.75 -0.42 -0.3 0.27 -2.65 -0.71 -0.65 -1.8 0.44 -0.97 -2.39 -3.9 -0.79 -1.36 -1.09 -4.27 -7.98 - -1.92
AT4G34520 (FAE1)
- -8.49 -5.41 - - -7.42 - - - - - - - - -5.87 -6.37 - - - - - - -5.35 0.62 0.52 0.22 -6.82 3.77 4.35 -2.48 -6.85 -8.94 - -4.06 -4.93 - - 3.24 -9.89 - - - - - - - - -
1.37 1.72 1.21 0.81 1.39 1.25 1.08 -4.49 -3.81 -4.75 -4.19 - - 0.9 1.18 -0.33 -0.58 -0.82 -2.88 0.03 -0.01 -0.06 -0.29 -0.37 -2.48 -0.16 -0.5 0.08 -1.42 -2.78 -0.41 -0.72 -0.14 0.02 -1.08 -0.0 0.9 0.86 0.5 -1.81 -5.04 -0.88 0.55 0.6 -1.02 -0.34 -6.43 0.63
- - - - - - - - - - - - - - - - - - - - - - - 2.7 2.41 2.31 - 1.03 4.75 0.99 -4.55 - - - -5.26 - - - - - - - -2.0 - - - - -
-1.6 1.77 -3.61 - - - - - - - -4.4 - - 0.55 -3.29 -5.38 - - -5.3 -0.57 -4.72 - - 4.07 -4.77 3.03 - 0.4 3.08 - 2.78 - - -5.02 - -4.36 - - - - - - - - - - - -
- -1.3 -5.94 - - - - - - - - - -6.16 -2.88 -4.39 -3.16 - - -5.6 -4.06 -5.82 - -5.39 4.71 - 3.85 - 0.98 1.49 -7.21 0.66 -6.89 - - -6.3 -3.88 -5.35 -10.03 - - - - - - -3.05 - - -
-1.67 4.24 -0.57 -0.3 -0.42 -0.37 0.91 -0.32 -1.64 -1.49 - 3.21 -0.75 1.68 1.59 - - - - - - - - -1.75 - - - - -1.7 - - - 0.16 0.17 - - - -1.05 -4.63 - - - - - - - - 1.59
AT5G25900 (GA3)
-2.25 0.32 -0.37 -1.5 -1.46 -3.21 -1.58 -5.18 -5.6 -6.36 -6.53 -3.13 -6.9 0.0 0.21 -0.46 0.64 0.01 -2.4 0.03 -0.05 -0.55 -0.43 0.15 1.23 -0.07 0.74 0.92 1.3 1.18 -0.18 0.69 -0.59 -0.52 0.08 -0.1 -0.39 -0.33 -0.51 -0.72 -0.17 -1.91 -1.24 1.56 -0.86 0.94 2.63 -0.37
AT5G39440 (SnRK1.3)
-4.52 0.41 -0.97 - - - -3.32 - -1.41 -1.99 - - -2.21 -0.18 - - - - -0.31 -4.98 - - - 3.35 - 2.58 - -0.44 4.55 - 1.61 - - - - - - -8.25 - - - - - - - - -8.51 -
2.9 -1.81 - -7.26 - - - - - - - - - -0.89 -5.58 -6.08 - - - -3.05 -5.24 - - 3.06 0.13 0.34 - 3.66 3.54 0.18 1.14 -5.77 -8.73 -5.61 -9.26 -7.24 -8.12 0.14 -12.09 - -7.81 - -3.9 - -8.14 - - -
- - - - - - - - - - - - - - - - - - -0.47 - - - - 4.67 - 3.9 - 0.59 2.31 - -1.89 - - - - - - - - - - - - - - - -2.55 -
- -3.78 - - - - - - - - - - - - - - - - - - - - - 3.05 - 3.49 - 3.26 4.19 - - - -1.29 - - - - -3.95 -3.64 - - - - - - - - -
- 0.54 - - - - - - - - - - - 0.74 - - - - - - - - - 1.73 - - - - 4.72 - - - - - - 3.77 - -0.6 - - - - - - - - -0.25 -
-3.65 0.22 -5.41 - - - - - - - - - - -0.14 -0.33 1.81 -1.46 -2.52 -0.39 0.93 0.05 0.57 0.09 1.27 -0.28 1.27 0.24 1.96 2.4 -2.55 -2.21 1.85 0.76 -0.23 1.65 -0.48 -0.54 0.27 0.72 -0.81 2.06 -4.21 -6.12 - -6.12 - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.