Heatmap: Cluster_23 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Ovary
Microspore
Generative cell
Pollen
Sperm cell
Pollen grain
Pollen tube
Pollen tube (1.5h)
Pollen tube (3h)
Pollen tube (9h)
Pistil
Style (before flowering)
Style (after flowering)
Style (pollinated, after flowering)
Flower (buds)
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Pericarp/Exocarp (4 DPA)
Pericarp
Pericarp (5 DPA)
Pericarp (7 DPA)
Pericarp (10 DPA)
Fruit (mature green)
Fruit (breaker stage)
Septum (7 DPA)
Septum (10 DPA)
Septum/Seed (4 DPA)
Seed (5 DPA)
Seed (7 DPA)
Seed (10 DPA)
Seeds (10 DPA)
Seeds (20 DPA)
Seeds (30 DPA)
Seeds (Pk-stem)
Seeds (Br-stem)
Seeds (Pk-equatorial)
Seeds (Pk-stylar)
Seeds (Br-stylar)
Seeds
Seeds (RR)
Seeds (LR)
Seeds (MG-equatorial)
Hypocotyl
Seedling (leaves)
Seedling (roots)
Callus
Meristem (vegetative)
Meristem
Apical meristem
Leaf
Root
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root hair cells
-4.26 - - 0.26 - -3.23 -2.71 -3.53 -3.71 -2.95 -3.17 -4.17 -3.26 -6.6 - -5.24 -1.7 -1.94 - -3.1 - 2.36 - -5.82 -5.8 -1.74 -3.09 - -4.94 - - - -4.11 - - - -2.11 -4.99 -2.65 -1.01 -1.65 -3.65 -3.66 - - 0.98 -1.45 4.63 2.92 -3.53 -2.73 -0.19 1.16 2.95 -1.29 -4.91 -5.44 0.99
0.57 - -1.13 2.12 2.96 - 3.69 - - -4.17 - - 1.49 -0.74 -0.8 -1.74 - 1.46 - -0.05 -1.53 2.07 - -1.41 -2.7 1.21 0.36 - - -0.71 -0.79 -2.42 - - 0.73 -0.32 - - - 0.3 - -1.22 - 1.72 - - - 1.52 -0.07 - 0.09 -1.29 -1.96 - - - - -
0.72 -0.82 -1.4 0.38 1.33 - -0.89 - - - - - -1.79 -2.12 - - - -2.71 - - - 2.5 - -2.77 -2.09 -1.15 4.17 0.71 - 0.73 1.01 2.14 1.35 1.57 - - 0.73 -0.21 1.77 - - -2.26 - - 0.61 - - - 1.54 - - - -2.85 - - - - -
- - - -2.14 0.19 -2.94 -2.52 -0.59 -1.71 - - - - -2.66 -3.47 -2.9 0.4 1.17 -1.25 - -0.15 -0.27 1.74 2.7 0.63 -2.75 - 0.08 -0.72 -1.42 -0.16 2.16 0.48 -0.93 0.63 0.61 1.52 1.18 -0.73 2.05 1.85 0.56 0.92 -0.7 -0.69 -2.92 -2.45 -3.53 -4.49 - - - 0.6 2.41 - - - -
- - - - 0.98 - 1.41 -1.51 -1.28 - -1.73 - -0.84 0.48 0.55 -1.52 - - - - -0.19 - - 1.6 0.34 1.48 2.05 0.99 0.79 0.28 1.5 2.54 3.6 - - - - - - - - 1.12 2.06 - 1.91 - - - -0.69 - - - -4.73 - - - - -
- - - 3.22 0.97 - 0.38 - - - - - -0.86 - - - - -0.79 - - -0.54 0.11 - 1.15 1.82 0.02 0.14 - 2.62 2.12 - - -0.8 - - - 1.95 2.42 - - - 1.16 - - - - - - 2.89 - - - 0.52 1.73 - - - -
- - -2.85 -2.01 1.61 - -1.96 0.26 -1.17 - -5.04 - -2.62 -1.96 - -1.89 - -3.58 - - -2.03 2.14 - -2.24 -1.29 2.49 1.83 -1.82 0.97 0.24 -0.05 0.71 2.22 2.72 2.9 -0.03 0.41 -0.13 - 1.11 0.46 0.29 1.09 -0.5 0.51 - - - -1.78 - - - -5.38 -3.26 - - - -
- - - - - - - - - - - - -2.12 - - - -1.48 -3.21 - - 0.03 - - -1.21 -0.55 -0.47 1.73 - 0.7 -0.94 -1.69 1.52 2.54 3.25 3.84 0.57 - 0.41 - -0.06 1.45 0.27 - 1.49 - 1.5 - -2.35 -0.72 - - - -1.91 0.78 - - - -
- 0.14 - - 3.52 - 2.87 - -0.81 - -2.72 - - 0.69 - - -0.35 -0.37 - - -1.0 - - -1.11 -0.81 0.34 - - 0.77 2.87 1.51 2.66 2.59 - 2.21 - - 0.48 - - - -2.33 - - - - - - - - - - -5.25 - - - -0.03 -
1.68 1.9 0.21 1.48 1.32 -6.26 1.86 -5.21 -5.17 -5.94 -5.58 -6.09 -0.42 -0.6 -0.13 -0.63 -0.34 -2.0 0.93 1.76 -0.16 -0.12 -0.06 -0.28 -0.53 -0.22 1.34 0.09 -0.11 -0.03 0.27 0.43 1.0 -2.03 2.06 -0.0 -0.95 -1.65 -1.56 -0.97 -2.04 -1.49 -0.59 -1.18 -1.9 -0.96 -3.18 0.06 -0.57 0.15 -0.84 -1.5 -1.75 -0.41 -0.81 -1.43 -0.39 -2.4
-7.34 -6.44 -7.29 -6.71 -6.18 - -7.4 -10.54 -13.99 - - - -6.93 -2.28 -2.83 -1.62 -3.39 -3.46 -8.51 -2.46 0.15 0.57 -0.72 0.52 1.35 -0.57 -0.61 -1.08 -0.12 -0.75 -5.1 -0.98 0.25 -7.49 -2.06 -1.65 -3.9 -3.76 -3.59 -1.54 -2.51 -2.19 -3.98 -3.67 -1.98 -0.48 0.7 1.84 3.28 -6.8 -5.2 -2.9 0.69 2.7 3.06 1.35 1.22 2.47
-4.93 -2.16 -1.77 -3.58 - - - - - - - - -2.81 -3.71 -2.03 -2.63 -1.7 -2.36 - -1.45 -2.94 -1.44 -4.68 -2.14 -1.49 -1.03 -0.16 -3.4 -0.57 -2.09 -3.15 -3.3 -1.21 -2.33 -1.71 - - -2.47 - - - -5.13 - - - -2.45 -1.54 3.63 2.44 - -3.72 -1.04 2.05 3.28 1.83 -0.4 -0.64 3.73
1.13 0.64 -1.01 -0.69 1.5 -2.25 -3.32 -3.63 -3.38 -3.1 -2.81 -3.0 -0.73 -3.35 -4.45 -4.25 -2.25 -3.22 -3.35 -6.49 -5.17 0.55 -5.65 -6.14 -5.96 -1.81 -0.25 -5.0 -3.75 -6.24 -2.97 -3.85 -2.65 -5.51 -1.65 -3.13 1.86 2.19 2.64 3.12 2.53 1.81 2.56 2.38 -0.99 -6.22 -8.4 -3.61 -3.36 -2.69 -2.31 -7.28 -5.83 - -3.79 - -7.99 -
-0.64 -0.5 0.7 0.26 0.86 -5.72 -2.78 0.78 0.55 - -6.93 -4.83 -2.0 -0.1 -1.35 -0.43 -1.88 -0.86 -0.75 -1.12 - 4.12 -4.71 - -23.07 -2.98 -1.86 -5.62 -5.26 - - -5.61 -5.17 - -2.92 -3.43 -3.64 -3.21 - -2.46 - -4.13 -3.55 -0.5 -3.5 -0.16 -4.0 2.82 2.96 -3.31 -2.06 -3.49 1.35 1.7 0.48 -1.26 -1.75 -0.19
- - -3.26 4.78 -3.17 - -4.42 - -7.25 -28.4 - - -6.16 -6.02 -5.02 -2.81 -5.48 -6.81 - -2.56 - 3.72 -4.73 -5.21 -5.75 - -3.63 -5.13 -4.78 -5.76 -5.86 -8.67 -6.98 - - - - -5.44 - -2.46 -3.49 -6.22 - -3.45 - -4.48 -4.89 1.85 2.56 - -5.63 - -0.82 2.46 -2.21 - -5.1 -
-1.43 -1.22 -1.7 -1.82 -2.68 - - -4.07 -6.32 -7.47 - - -5.75 -2.99 -4.22 -4.23 - -6.6 - -2.53 - 2.7 -6.54 -4.58 -4.94 -1.68 -4.65 - -3.38 - -6.69 -5.86 -2.7 - -2.53 -2.55 - -5.61 - -1.25 -1.27 -3.37 -4.28 -3.23 -4.43 -5.86 - 3.78 3.52 - - - -0.57 4.42 - - - -
-1.24 0.13 0.86 1.88 3.74 - -2.88 -6.63 -4.05 - - -6.87 -0.69 -5.29 -21.53 -2.39 - -4.78 - -1.13 -2.93 2.14 -25.7 -3.31 -23.24 -0.17 -3.6 -3.98 -3.69 -3.62 - -3.61 -3.19 -1.45 -4.15 - - -3.2 -1.25 -2.62 - -3.81 - -0.21 - - -7.04 3.68 2.74 -3.8 - - -3.42 2.98 -1.79 -3.5 - -3.65
-0.72 -0.24 -1.12 2.74 3.05 -2.53 -0.12 -3.22 -3.17 -2.91 -3.36 -3.3 0.23 -0.67 -0.72 -0.84 0.53 0.9 -1.14 -0.94 0.57 -4.98 -0.25 1.2 1.38 -0.57 -1.14 0.15 0.37 0.14 0.07 0.78 1.22 -1.1 0.35 -2.18 -2.29 -2.03 -3.22 -3.24 -1.64 -1.51 -4.23 -2.18 -1.76 1.28 1.08 -0.58 -0.98 -0.25 -0.31 -0.61 0.03 -0.14 -1.18 -1.42 -3.57 -0.89
- 3.95 - 2.49 - - - - - - - - 2.82 - - - - - - - - 3.93 - - - - - - - - 2.31 - - - - - - - - - - - - - - - - - 1.79 - - 2.62 - - - - - -
- - - - - - - - - - - - - - - - - 2.52 2.06 - - 4.67 - - - - 2.26 - - - - -0.18 -0.57 - - 1.86 - 1.59 - - - 1.8 - - - - - - -0.18 - - - 1.9 0.59 - - - -
- - -7.89 -4.34 -6.18 - - - - - - - - - - -7.92 -1.41 -3.21 - - -4.28 0.3 -7.95 -8.51 -2.41 3.13 -0.85 -8.07 -2.84 - - -9.31 -1.81 - -1.49 1.77 1.7 2.38 1.99 2.06 2.52 2.43 2.56 2.18 1.87 - -4.83 - -7.08 - -4.68 -7.25 -0.83 - - - - -
-11.02 -10.12 - -4.67 -8.47 -13.45 -7.84 -13.76 -12.88 -12.65 -12.75 -14.89 -10.9 -9.87 -9.94 -9.38 -5.48 -3.67 - -13.09 -6.42 0.17 - -8.65 -2.41 2.35 0.42 -8.49 -2.95 -10.94 - -7.9 -1.83 -7.66 -2.09 0.96 2.15 2.47 2.45 2.79 2.64 2.24 2.65 2.4 1.15 -7.58 -6.78 -11.73 -9.96 - -8.21 -5.95 -1.69 -7.74 - - - -
0.74 -1.88 -0.52 -5.02 - - - -6.99 -6.13 - - - -3.83 -4.42 -4.83 -1.47 -4.68 -5.48 0.96 3.2 -5.09 1.18 -3.28 -3.16 -1.78 -2.76 -2.49 -2.08 0.26 -3.35 -2.49 -2.88 -3.55 -1.65 -2.84 -0.85 -2.09 -1.54 -2.04 -1.53 - -2.53 -1.93 -2.0 -1.39 -0.78 - 2.83 2.75 - -4.63 - -3.56 0.61 4.01 0.3 -5.65 0.91
1.86 0.83 2.39 -4.45 -6.33 - -10.32 -12.48 -10.54 -12.0 -10.73 -12.16 1.67 -0.4 -1.08 -0.77 0.68 1.09 2.53 0.36 -0.12 1.1 -0.77 -0.49 -0.4 1.43 1.88 0.13 0.34 0.57 0.43 0.58 0.19 -0.1 -0.49 -1.36 -2.31 -2.21 -1.53 -2.06 -2.27 -1.78 -1.14 -1.95 -1.63 -0.9 -2.8 0.95 -5.4 0.78 -0.73 -2.09 -0.53 -0.73 -1.5 -2.47 -4.53 -0.9
-2.77 -0.89 -6.34 -5.92 -4.94 - - - - - - - -5.5 - -6.14 -2.12 -5.92 -6.64 -2.76 0.14 -6.14 2.1 - -5.18 -4.34 -2.65 0.68 - -3.26 -5.72 - -7.8 -3.44 - -1.65 - - -4.15 -2.93 - - -2.65 - - -1.69 -5.53 - 2.28 4.04 - -3.39 - -5.75 4.75 - - - -3.04
0.59 0.82 -0.59 1.99 2.84 -7.55 2.2 -6.96 -5.1 -7.86 -8.59 -10.1 -1.7 -3.05 -2.48 -3.71 -1.62 -1.55 -0.17 0.48 -1.18 0.78 -1.69 -1.52 -1.61 0.87 1.68 -0.82 -0.26 -0.94 -1.84 -1.05 -1.23 0.01 0.62 -0.28 0.12 -0.23 0.11 -0.17 -1.1 -0.32 -0.01 0.21 0.02 -2.13 -5.34 -0.8 2.41 0.3 -0.95 -3.76 -1.82 -0.55 -0.64 -0.81 0.56 -3.96
0.57 0.42 -0.32 1.47 2.4 - 1.72 -5.89 -4.25 -8.19 -8.47 -7.56 -2.12 -2.34 -2.23 -3.0 -1.07 -1.25 -0.34 0.77 -0.29 0.71 -1.24 -0.91 -0.8 0.7 1.87 -0.02 0.51 -0.46 -1.01 -0.59 -0.7 -6.48 0.53 0.09 0.32 -0.0 0.22 -0.07 -0.45 0.16 0.63 -0.03 0.05 -0.66 -5.33 -0.3 2.29 -0.03 -0.66 -2.73 -0.73 0.22 -0.91 -1.0 0.3 -2.62
-0.58 0.42 -2.38 3.34 4.36 - 2.3 - -2.79 - -5.98 - - - - -3.47 - -2.58 -0.19 -0.13 - - - - - - -0.55 - - - - - - - -0.36 - - -0.12 - - 1.03 -1.62 - - -0.13 - - -1.77 3.52 - - -1.94 -3.09 -1.96 - - - -
0.54 1.24 0.36 1.09 -5.35 -5.08 -4.95 -5.11 -4.63 -5.29 -4.5 -6.16 1.48 1.01 0.6 -0.07 1.44 -0.41 0.02 -0.06 0.37 1.17 0.51 0.46 0.32 0.44 0.66 0.27 0.41 -0.0 0.37 0.49 0.25 -2.76 -0.05 -0.7 0.33 -0.25 -0.89 0.35 0.02 -0.3 0.32 -0.39 -0.58 -0.36 -3.54 0.41 1.37 0.14 0.01 -1.2 -0.05 -0.56 -2.89 -2.58 -1.71 -2.84
2.12 2.5 -4.3 0.57 -2.97 - - - - - - - -3.45 - - -2.99 -3.82 - 1.01 2.34 - 3.58 - - -3.57 -3.91 -2.18 - - -3.72 - - -1.77 -0.09 -0.1 -1.67 - -1.06 - -1.26 - -1.83 -0.89 - -1.85 - - -0.99 4.42 - - - -8.85 -2.1 - - - -
- - - - - - - - - - - - 0.83 0.79 - - - 0.85 - - - 5.32 - - - - - - - - - - 0.62 - - - - - - - - - - - - - - - 3.32 - - - 0.3 - - - - -
- - - - -2.53 - - -4.18 - - - - -4.02 - - - - - - - -2.87 - - -4.54 -0.31 -1.56 - -3.54 -0.57 -3.21 - -1.79 0.01 - -1.84 -0.62 2.85 2.67 2.54 1.49 0.54 2.23 3.62 3.58 -0.62 - - - - - - - - - - - - -
- - 2.3 - 3.64 - - -0.08 - - - - - 1.39 - - - - - - - - - - - - - - - - - - 1.35 - - 4.93 - - - - - - - - - - - - 1.96 - - - - - - - - -
-4.57 -3.98 -0.46 -5.63 -7.84 -8.26 -6.83 -9.84 - - - - -1.73 -3.52 -3.77 -4.12 -0.04 -1.18 -0.21 0.88 0.6 -2.1 1.69 1.1 0.28 -3.35 -1.71 0.36 -3.55 -0.84 0.37 -0.01 -0.21 1.58 -1.28 -5.15 0.8 0.97 0.96 0.73 0.79 0.48 1.28 1.17 -0.76 0.52 -2.06 -0.45 -0.38 0.74 -1.48 -1.15 0.16 0.86 2.85 0.31 -4.09 1.3
-3.89 -5.34 -1.04 -2.19 -5.43 - -3.4 -10.36 -7.73 - - - -1.1 -1.91 -2.89 -2.14 1.75 -1.09 -2.64 -0.35 1.43 -2.35 1.71 1.4 1.04 -4.59 -1.94 0.77 -0.4 0.55 0.18 0.88 1.79 2.14 1.68 -1.19 0.49 0.15 -0.06 0.31 0.14 -0.41 0.14 -0.2 -1.04 -1.62 -2.08 -1.87 0.11 -0.36 -1.3 -1.74 -0.34 -0.86 2.56 -0.14 -4.43 0.06
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - 1.14 0.11 -0.55 - -0.26 - - - - - -0.45 - - - - - - - - - - -1.33 -0.76 - -2.37 - -0.91 0.14 -0.71 -0.94 0.38 - 2.57 - 1.46 0.31 1.53 1.66 - 1.11 - 2.57 1.48 3.38 - -1.27 - - -1.06 -0.24 -0.87 2.1 -0.95 0.65 0.33 -
1.2 1.11 0.44 -0.79 -5.17 - -6.34 -6.88 -10.19 - - - -0.21 -1.74 -2.39 -2.13 -0.02 -2.6 1.1 1.24 0.48 0.3 0.25 -0.06 -0.19 1.09 -0.92 0.45 0.25 0.34 0.55 0.31 0.28 -0.97 1.84 2.04 -0.16 -0.97 -0.43 -0.15 -1.68 -0.02 0.73 0.71 0.88 0.14 -3.07 -0.51 -0.72 0.5 1.42 -0.06 -0.5 -1.97 -1.36 -1.89 0.2 -2.29
1.01 2.12 0.99 1.62 2.82 - 2.15 -3.33 -2.61 -3.21 -4.39 -3.22 0.65 -1.73 -2.41 -1.4 -3.67 -1.9 1.15 0.16 -0.94 - -2.73 -1.71 -1.42 -1.66 -0.07 -1.2 -0.96 -1.68 -0.51 -0.04 0.41 1.53 0.51 -2.0 -1.23 0.01 -0.73 0.88 0.26 0.26 0.17 -0.11 -1.31 0.1 -5.01 -0.78 0.76 -0.47 0.27 -0.61 -0.5 -1.13 -2.36 -3.14 -1.64 -1.01
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - -1.75 - -1.84 -5.25 - - - -3.46 - - - - - - - - - - -4.64 -3.81 -1.47 -0.55 -1.5 0.2 -1.11 - - -1.39 - 1.91 1.6 2.41 2.06 0.45 2.79 2.45 2.24 1.46 3.07 2.91 - - - -1.72 - - - -4.02 - - - - -
0.53 -0.15 0.69 1.65 3.11 -4.75 0.51 -7.65 -7.93 -6.42 -5.18 -6.47 2.05 0.82 -0.81 -0.84 1.69 -0.85 -1.04 -0.68 0.24 1.7 0.51 0.46 0.62 -1.33 -0.89 0.08 -0.33 -0.04 0.07 0.34 0.21 -2.47 0.73 -1.32 -1.35 -1.53 - -1.81 - -2.43 -0.61 -0.64 -2.32 -0.04 -3.33 -2.21 0.57 -0.99 -0.41 -2.18 -0.87 -1.45 -0.87 0.86 -1.81 -4.82
1.0 0.85 1.18 0.88 2.15 - -0.52 -7.87 -8.32 - -5.39 -4.14 1.42 0.36 -1.23 -1.17 1.9 -0.54 -0.22 -0.48 0.71 1.46 0.91 0.87 1.05 -0.88 -0.93 0.42 0.35 -0.2 0.46 0.36 0.28 -2.17 0.94 -0.63 -0.87 -3.05 -2.97 -2.94 -1.98 -2.04 -1.63 - -0.56 1.65 -4.15 -0.93 0.18 -1.31 -0.89 -1.14 -0.51 -1.31 -1.04 0.62 -1.28 -1.14
0.35 0.03 -2.75 0.17 -6.02 - - - - - - - -5.33 -0.34 -1.14 -0.19 -6.6 -6.57 -3.02 -0.11 -6.54 4.36 -7.37 -2.86 -3.51 0.2 -0.9 - -1.13 - -7.7 -5.24 -1.03 - -1.67 -4.29 -4.05 -4.1 -2.95 -0.77 -0.26 -2.38 -3.89 -1.92 -3.91 -5.27 - 3.31 3.18 -5.63 - - -1.25 1.97 -1.83 - -5.57 0.54
- - - - - - - - - - - - - - - - - - - 1.09 0.76 - - 1.3 - - 0.95 - 0.16 - - -0.47 -0.51 - - 1.86 - - - 4.9 - 2.15 2.99 - - 0.26 - - - - - - -4.04 - - - - -
-0.95 -1.79 -0.73 2.62 -3.35 -3.29 -3.18 -3.11 -3.2 -2.81 -2.6 -2.56 -1.06 -0.32 -0.61 -0.62 2.11 1.51 -1.22 -1.62 0.11 2.42 -1.76 -0.14 0.59 1.68 2.15 -0.42 0.92 0.11 -1.17 -0.07 0.46 -3.28 0.99 0.52 -2.99 -2.49 -2.26 -2.27 -1.96 -1.12 -3.42 -3.5 0.54 -0.49 -4.59 1.1 1.72 -1.71 -1.8 -2.48 -2.31 0.15 -1.92 -3.09 -1.84 -2.63
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-2.58 -3.69 -5.66 -6.82 -6.5 -9.69 - -9.68 -9.49 - - - -6.7 -2.25 -2.82 -2.71 - -5.83 - -2.49 -10.29 3.13 - -1.91 -3.14 -2.63 -1.62 -8.44 -3.84 - -10.62 -6.83 -1.27 - -2.12 - -3.05 -2.65 -0.96 -0.86 -1.14 -2.21 -2.22 -0.91 -3.53 -3.02 -8.8 3.35 4.55 - - - -1.1 3.17 - - -8.81 -0.7

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.