Heatmap: Cluster_50 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Ovary
Microspore
Generative cell
Pollen
Sperm cell
Pollen grain
Pollen tube
Pollen tube (1.5h)
Pollen tube (3h)
Pollen tube (9h)
Pistil
Style (before flowering)
Style (after flowering)
Style (pollinated, after flowering)
Flower (buds)
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Pericarp/Exocarp (4 DPA)
Pericarp
Pericarp (5 DPA)
Pericarp (7 DPA)
Pericarp (10 DPA)
Fruit (mature green)
Fruit (breaker stage)
Septum (7 DPA)
Septum (10 DPA)
Septum/Seed (4 DPA)
Seed (5 DPA)
Seed (7 DPA)
Seed (10 DPA)
Seeds (10 DPA)
Seeds (20 DPA)
Seeds (30 DPA)
Seeds (Pk-stem)
Seeds (Br-stem)
Seeds (Pk-equatorial)
Seeds (Pk-stylar)
Seeds (Br-stylar)
Seeds
Seeds (RR)
Seeds (LR)
Seeds (MG-equatorial)
Hypocotyl
Seedling (leaves)
Seedling (roots)
Callus
Meristem (vegetative)
Meristem
Apical meristem
Leaf
Root
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root hair cells
0.5 0.14 -1.01 5.1 -2.02 - -2.1 -7.66 -9.51 - -10.87 -11.12 -0.71 -0.85 -1.17 -1.55 3.09 -2.55 -3.23 -2.85 -3.46 -1.95 -3.44 -3.31 -3.74 -3.05 -4.08 -2.58 -3.25 -2.81 -1.16 -0.97 -0.68 -2.71 -0.17 -2.09 -2.51 -2.29 -3.1 -2.58 -3.36 -2.79 -2.3 -2.48 -2.76 -2.28 -5.69 -1.01 -1.74 -0.98 -1.08 -3.51 -2.64 -0.93 -1.0 -2.49 -2.86 -1.85
-6.28 - -6.65 5.56 -5.56 - -0.69 - -8.81 - - - -5.46 -4.2 - - 3.28 -5.04 -5.0 - -6.57 - - -6.25 - - - - - - -6.01 -3.93 -5.81 - - - - - - - - - - - - - - -4.61 -6.23 -4.43 -3.47 -6.45 -6.12 - - -6.05 - -
-2.35 -2.85 - 5.66 -0.17 - -1.41 - - - - - -1.58 - - -4.12 1.74 -3.45 - - - -3.91 - - - - - - - - - -5.05 -4.44 - - - - - - - - -7.03 - - - - -3.27 -0.77 -3.05 - -3.89 - -2.66 -3.29 - - -2.99 -0.46
-2.07 -1.7 -2.46 5.38 3.03 -3.64 0.3 -3.09 -3.83 -3.99 -4.05 -4.14 -1.11 -3.09 -3.14 -3.23 -0.82 -2.79 -2.91 -2.61 -3.25 -3.84 -3.57 -3.06 -3.5 -3.72 -2.84 -3.18 -3.27 -3.9 -3.41 -3.36 -3.67 -2.77 -3.15 -4.57 -4.05 -6.69 -4.58 -2.78 - -4.7 -3.58 - -4.01 -2.92 -7.29 -1.57 -2.11 -2.28 -1.89 -2.26 -3.48 -3.03 -4.28 -2.81 -2.51 -3.44
-0.49 -0.51 -2.26 5.2 3.21 -5.47 -0.97 -3.92 -4.29 -2.23 -2.79 -3.29 -1.77 -4.44 -5.06 -3.72 -1.03 -2.75 -1.15 -2.31 -5.25 0.45 -2.53 -2.71 -3.12 - -2.15 -2.75 -2.19 -3.31 -2.44 -3.22 -2.29 - -0.55 -3.29 -3.33 -3.63 - -3.8 - -4.73 - - -1.4 -0.7 - -0.78 -1.02 -4.51 -1.24 -2.33 -2.7 -2.85 -3.11 -4.07 -2.59 -
-5.08 -5.38 -3.4 5.62 -1.07 -5.2 -0.67 -8.51 -6.14 - -6.85 -4.24 -2.8 -1.5 -3.14 -3.19 2.04 -4.34 - - -6.11 - - - - -5.63 - -4.72 - - -6.14 -6.46 -7.01 - - - - - - - - -6.89 - - - -4.97 -7.01 -4.46 -5.47 -1.38 -1.18 -3.08 -4.18 -5.71 0.53 - - -
- - - 5.57 0.81 - -1.93 -2.4 -2.52 - -10.93 - -1.53 -2.61 -5.49 -4.54 2.53 -3.11 - - - - -4.68 -4.91 -6.12 -3.16 -3.44 - - - -2.66 -4.46 -3.4 - - - - - - - - - - - - - - -1.47 -1.22 - -4.9 - -5.56 -3.55 -2.66 - - -
-6.07 -4.44 -4.98 5.5 -0.72 - -0.61 - -8.94 -7.86 -7.58 -6.66 -5.07 -3.36 -2.97 -3.44 3.13 -4.48 - - -3.66 - -3.78 -3.74 -4.13 -6.45 -7.33 -3.46 -4.89 -3.03 -2.7 -2.94 -4.33 -1.04 -3.01 -5.21 - - - -4.8 -3.43 -4.24 - - - -4.95 -3.36 - -4.15 -5.45 -2.38 -3.74 -4.46 -5.28 -5.62 -6.0 -4.57 -
- - - 5.52 0.74 - - -8.56 -7.86 - - - -3.93 -2.38 - -4.77 3.26 -5.25 - - - - - -6.97 - - - - - - -5.79 -5.07 -5.24 - - - - - - - - - - - - - - - -2.2 -3.86 -3.91 - -6.5 -5.35 -4.81 - - -
-5.65 - - 5.56 -1.3 - -4.84 -8.04 -8.59 - - - -4.19 -3.05 -4.29 -4.76 2.99 -6.03 - - -5.17 - - -6.76 -6.26 - - -4.21 -6.28 -3.84 -4.12 -2.79 -2.02 -0.44 -1.65 -5.04 - - - -4.56 - -5.98 -4.05 - - - - - -4.8 -2.57 -2.75 - -6.89 - -5.53 - - -
- - - 5.56 -1.82 - - -8.36 - - - - - -6.83 - - 3.38 -4.7 - - - - - - - - - - - - - -6.01 -5.05 - - - - - - - - -7.73 - - - -4.61 - - -3.31 - - - -7.82 - -3.85 - - -
- -4.44 -7.9 5.49 -3.98 - -7.15 -10.49 -9.94 - - - -4.92 -6.44 -6.84 -8.08 3.53 -4.99 - - -5.67 - -4.97 -4.96 -5.04 -7.51 -8.39 -5.08 -5.77 -3.68 -4.22 -3.24 -4.6 - -5.44 - - - - - - -7.95 - - -4.55 - - -7.29 -4.78 -3.05 -2.32 - -7.63 -5.24 -3.07 -4.37 -4.86 -5.05
- - - 5.65 -0.63 - -1.23 -7.46 -8.73 -8.66 - -7.56 -5.09 - - - 2.74 -4.55 - - - - - - - - -7.88 - - - -7.57 - - - - - - - - - - -7.05 -5.34 - - - - - -5.29 -5.09 - - -9.81 - - - - -
-4.0 -3.16 - 5.5 -0.48 - -0.21 -5.59 -8.29 - - - -4.31 -6.57 - - 3.43 - - -3.76 - - - - - -5.96 - - - - - - - - - - - - - - - - - - - - - - -3.89 - - - - - - - - -
- - -7.27 5.65 -2.08 - -1.7 -10.1 -9.84 - - - -4.53 -8.73 - - 2.78 -6.18 - - - - - -8.27 -5.33 -7.12 - - -4.55 -6.85 - -8.6 -4.33 - -2.04 - - - - - - -7.51 - - - - - - -5.86 - - - -10.95 -7.09 - - - -
- - - 5.74 -2.51 - -1.01 - -8.59 - - - -4.89 -7.02 - - 1.89 -5.59 - - - - - - -7.62 - - - - - - - - - - - - - - - - - - - - - - - -6.0 -2.28 -6.39 - -6.74 - - - - -
- -1.55 - 5.57 -1.04 - - - - - - - -2.01 -4.35 - -4.46 -0.19 -3.95 - - -2.62 - - -3.3 -3.28 - - -3.12 -2.86 - - -4.51 -1.69 - 0.39 - -0.07 -2.14 - -0.61 - -2.7 -0.89 1.01 - - - - 0.02 - - - -2.97 -3.02 - -2.61 - -
- - -5.51 5.74 -0.77 - -3.99 - - - - - -3.84 -6.15 - -6.65 0.81 -3.69 - - - - - -6.71 -4.14 -2.25 - - - - - -4.96 - - -3.0 -1.65 - -4.15 - - - -5.46 - - -1.26 - - - -3.32 - - - -7.61 -1.29 -4.69 - - -
- - - 5.71 -0.12 - - - - - - - -4.46 - - - 1.89 -5.22 - - - - - - - - - - - - - -5.42 -3.37 - - -2.34 - - - - - -4.87 - - - - - -2.29 -2.38 - - - -6.9 -3.44 - - - -
- -3.14 - 5.76 1.16 - -0.16 - - - -4.8 - -3.6 - - - -2.59 - - - - - - - - - - - - - - - - - - - - - - - - -6.19 - - - - - - -2.45 - - - - - - - - -
-3.4 -3.64 -4.88 5.7 0.27 - -2.16 -7.62 -6.52 -8.13 - -7.3 -1.95 -5.09 -7.4 -6.89 1.63 -5.81 -5.41 -4.67 - - -7.06 - - -5.86 -7.43 - - -6.64 -5.54 -6.93 -7.08 - -5.27 -5.88 -4.99 -5.84 - -3.91 - -6.18 -3.21 - -5.05 -5.23 - -6.69 -2.9 - -4.73 -5.11 -5.71 -5.68 - - - -4.45
-4.18 -4.31 -3.03 5.54 1.04 -7.35 -0.49 -8.57 -6.95 -5.07 -5.44 -5.76 -2.29 -4.33 -6.99 -5.41 2.69 -3.93 -5.95 -5.17 -6.01 -7.66 -6.33 -6.17 -5.01 -5.98 -4.83 -5.5 -5.55 -6.8 -4.97 -3.85 -3.65 - -3.34 - - -6.71 - -6.1 -4.73 -5.63 -4.73 -3.69 -5.89 -5.36 -4.71 -4.29 -2.04 -3.95 -3.55 -3.72 -3.7 -3.74 -6.06 -4.55 -2.72 -4.2
-4.7 -4.82 -1.92 5.57 -0.39 - -2.31 -9.64 -7.49 - -6.28 -7.66 -2.7 -5.72 -5.93 -6.01 2.63 -5.88 -0.9 -3.08 -3.6 - -2.14 -2.64 -3.14 -4.21 - -3.45 -4.23 -3.47 -3.08 -2.67 -4.15 - -3.28 -4.62 -4.94 -5.83 - -4.42 - -6.13 - - - -7.1 -6.36 -3.99 -2.89 -6.34 -4.68 -3.35 -4.15 -3.9 -6.33 -5.42 -3.94 -
-0.62 0.13 -1.41 4.86 2.36 - -0.76 -6.0 -6.55 -5.48 -5.49 -5.87 -1.9 -1.79 -1.99 -2.45 1.59 -1.14 -2.37 -1.75 -1.09 -1.4 -1.54 -1.46 -1.48 -1.34 -1.96 -1.06 -1.13 -0.96 -0.62 -0.44 -0.42 0.77 0.08 -1.97 -2.02 -2.61 -1.84 -2.4 -2.48 -2.25 -2.23 -2.29 -2.63 -2.18 -3.34 -1.61 -2.06 0.43 0.1 -2.3 -1.83 -1.82 -2.9 -2.65 -1.36 -2.29
- - -5.38 5.78 -2.43 - - - - - - - -4.15 - - - 1.09 - - - -3.44 - -4.33 -5.96 - - - - - - - -3.65 - - - - - - - - - -5.97 - - - - - - -4.18 -3.45 -2.78 - -5.92 - - - -1.85 -
-5.09 -3.2 -3.33 5.31 2.84 - 0.58 -3.22 -2.32 -4.62 -4.32 -5.36 -2.98 -3.55 -5.02 -4.36 2.19 -1.7 -1.19 -3.11 -5.75 - -4.17 -5.09 -4.07 -2.12 -3.58 - - - -2.85 -4.45 -3.86 - - - - - - - - -6.81 - - - -4.88 -6.49 -0.98 -1.34 -5.9 - -4.21 -5.17 -3.0 -1.8 - -4.97 0.01
- - - 5.79 -3.17 - -4.82 - - - - - -3.3 - - - 1.03 -5.83 - - - - - - - - -4.56 - - - - - - - - - - -4.11 - - - -4.97 - - - - - - -2.46 - - - - - - - - -
- - - 5.61 -3.65 - -4.22 - - - - - - - - - 3.09 -6.23 - - - - - - - - - - - - -3.3 - -5.64 - - - - - - - - -6.87 - - - - - - -2.32 - - - -7.17 - - - - -
- - -5.66 5.39 -3.83 - -2.28 -10.36 -9.91 - - - -4.62 -8.2 - - 2.46 -5.55 -5.08 -5.72 -1.86 -6.17 -3.81 -1.46 -1.29 1.07 -5.43 -2.53 -1.14 -1.95 -3.55 -2.59 -2.88 - -3.07 -3.55 - - - - - -7.06 - - - -3.33 - -1.11 -3.57 - -6.71 -5.92 -4.8 -2.8 1.5 0.18 -1.22 -2.03
-2.09 -0.68 -1.88 5.49 - - - -7.93 - - - - -4.13 -4.32 - - 2.8 -3.87 -1.0 - - -2.87 -2.63 -4.47 - - - - - - -3.74 -4.95 -6.22 - - - - - - - - - - - - -5.19 - -2.36 -4.69 -5.43 -5.08 -3.18 -4.49 -2.71 -1.94 1.41 -2.58 -4.49
- - -4.15 5.65 - - - - -2.32 - -3.96 -3.3 -3.75 -2.82 -0.55 -3.51 1.53 -4.85 - - -1.07 - -3.61 -4.78 - - -4.1 - -3.43 -2.94 - -3.12 - - - - - -2.3 - - - -5.18 -1.2 - - - - -3.99 -3.95 - - - -7.39 -1.98 -0.15 -1.6 -2.87 -
-1.21 -2.17 -2.64 5.19 2.09 -4.0 -1.33 -2.62 -3.67 -4.03 -4.28 -4.31 -2.55 -2.28 -1.94 -2.19 2.35 -3.77 -1.86 -2.44 -4.72 -1.15 -5.61 -5.19 -5.74 0.13 -0.14 -4.75 -4.32 -5.29 -4.84 -4.9 -4.6 -2.63 -2.66 -3.38 -0.39 -1.28 -1.01 -0.69 -1.9 -1.33 0.05 -0.52 -2.27 -3.52 -6.29 -1.51 -2.96 -3.23 -3.32 -4.84 -3.57 -3.26 -5.96 -5.59 -7.33 -7.0
- - - 5.72 -5.39 - - -9.39 - - - - -5.37 -4.13 -4.75 -5.95 2.24 -3.72 - -6.21 -6.14 -5.52 -5.04 -7.51 - - -6.19 - -5.69 - - -7.65 -5.08 - - - - - - - - -8.89 - - - -4.69 - -4.99 -3.23 -5.12 -4.73 - -5.7 - - - - -
-0.43 -1.11 -1.77 5.2 -2.15 - -4.42 -10.09 -9.6 - - -8.61 -1.11 -1.98 -3.36 -3.18 2.27 0.21 -2.87 -4.03 -1.09 -3.68 -0.28 -0.45 -0.39 -1.16 -3.19 -1.2 -2.36 -1.87 -0.54 -0.64 -1.44 -2.29 -1.79 -3.35 -5.13 -6.2 -4.09 -3.57 - -3.45 -3.37 - -2.27 -2.32 -4.44 -3.11 -2.55 0.72 0.86 -0.98 -1.86 -3.36 -4.44 -5.52 -2.98 -4.96
-2.28 -2.01 -2.52 5.31 0.55 - 1.61 -11.47 -7.76 -9.81 - - -2.0 -2.92 -3.75 -4.01 2.51 -3.94 -2.84 -3.87 -1.65 -1.81 -1.74 -1.71 -2.05 -4.41 -4.59 -1.47 -2.57 -1.99 -1.2 -1.43 -1.83 -3.68 -3.17 -5.23 -2.83 -3.62 -3.16 -3.5 -3.48 -4.24 -3.59 -3.44 -4.98 -3.71 -3.37 -3.27 -3.84 -1.42 -1.38 -1.34 -2.02 -4.22 -4.41 -3.36 -1.47 -
-7.08 -7.1 - 5.63 0.98 -5.42 0.45 -6.09 -6.25 -4.96 -6.18 -5.26 -5.74 -7.48 - -8.44 2.22 -3.92 - - - - -6.42 -7.36 -8.7 - - - - -7.19 - - - - - -5.2 - - - - - - - - - -5.26 - - -4.38 -6.93 -5.6 - -6.7 - - -6.69 - -
- -4.49 - 5.59 2.33 - 1.1 -6.89 -5.88 - - - -3.87 - - -4.9 0.84 -5.55 - - - - - - - - - -4.39 - - - -5.39 -5.18 - -2.84 - - - - - - - -2.75 - - -4.75 - - -3.32 - - - -5.37 - - - - -
-5.09 - -5.9 5.61 -1.78 - -2.8 - -8.09 - - - -5.29 - - -6.74 2.92 -5.81 - - - -5.66 - - - -0.21 - - - - - - - - - - - - - - - -8.0 - - -3.89 -5.65 - - -3.46 -3.85 - - -7.11 - - - - -
- - - 5.26 2.59 -3.12 3.03 -5.14 -4.36 -3.46 -3.07 -3.94 -3.72 -7.58 - - 2.31 -4.81 - - - - - - - - -6.83 - - - - - - - - - - - - - - - - - - - - - -4.04 - -6.43 - -8.93 - - - - -
-5.87 - - 5.66 - - - -9.06 - - - - -3.05 -7.7 - - 2.51 -6.15 -3.59 -0.89 - - - - -5.0 -6.09 - - -4.51 - - -7.15 -4.71 - -0.64 - - - - -4.58 - -8.39 - - - - - - -5.24 - - - -11.03 - - - - -
- - -6.34 5.75 - - -3.14 - - - - - -2.5 - - - 1.81 - - -5.85 - - -6.5 - - - - - - - - - - - - - -4.12 - - - - -8.39 - - - - - - -5.78 -3.87 -4.03 - -6.59 - - - - -
- - - 5.8 -1.96 - -2.67 -5.37 -6.62 - - - -7.08 - - -8.54 0.85 -4.47 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -4.21 - - - -9.03 - - - - -
- - - 5.61 1.58 - -0.39 -6.01 -6.91 - -8.58 -8.18 -4.61 -8.47 - -8.68 2.37 -6.34 - - - - - - - - - - - - -7.9 -8.93 - - - - - - - - - - - - - - - -4.7 -4.9 - - - -9.38 -7.14 - - - -
- - - 5.6 1.88 -4.9 0.84 -6.23 -5.21 -5.82 -5.46 -7.14 -2.4 -3.61 - - 0.95 -4.84 - - - - -5.88 - - - - -5.14 - -4.8 -4.28 -5.03 -3.42 -1.61 -1.52 - -3.51 - - - - -5.86 - - - - - -3.57 -2.36 - - -5.33 -4.84 - - -3.29 -5.2 -2.65
- - - 5.51 1.98 -3.73 0.53 -6.11 -5.73 -4.4 -3.49 -4.7 -5.16 - - - 2.65 -3.99 - - - - - - - - -7.09 - - - - - -7.75 -3.38 - - - - - - - -8.6 - - - - - - -2.87 - - - -6.87 - - - - -
- - -8.08 5.71 -4.57 - -4.21 -10.37 -11.46 - - - -5.0 -8.18 - - 2.32 -6.39 - - -6.52 - -7.01 -7.64 -8.08 -9.12 - -5.71 -8.05 -7.89 -4.96 -4.81 -7.17 - - - - - - - - - - - - -8.36 - -4.41 -5.16 -6.29 -4.71 -7.45 -9.16 -6.36 -5.29 -7.51 -6.77 -4.69
-5.79 -2.04 -4.22 5.34 -2.15 - -4.32 -5.71 -5.84 -6.79 -6.54 -5.55 -4.05 -0.71 -1.41 -2.59 3.11 -3.77 -4.51 -1.37 -1.46 -4.88 -2.11 -1.93 -1.9 -2.41 -4.78 -2.13 -2.16 -1.1 -0.97 -0.84 -1.58 -1.4 -3.25 -3.54 - -6.9 - -4.75 -3.79 -4.89 - - -3.46 -3.2 -7.76 -2.84 -2.09 -0.25 -2.11 -3.88 -4.58 -3.16 -2.71 -4.11 -3.88 -6.34
-4.82 -5.71 -4.65 5.06 -3.2 -2.75 -2.16 -2.09 -2.67 -2.56 -2.58 -2.49 -4.27 -1.85 -1.79 -1.83 2.47 -2.48 -5.87 -6.4 -2.18 -0.27 -3.8 -2.44 -0.97 -1.8 -0.56 -2.86 -1.31 -2.54 -4.1 -2.79 -2.48 -5.67 -3.82 -1.49 0.29 0.24 0.11 0.32 0.02 0.18 0.81 0.72 -0.07 -1.28 -6.68 -4.84 -5.19 -4.17 -3.64 -5.31 -5.42 -4.76 -4.65 -3.95 -5.51 -5.71
-4.21 -4.29 -3.37 5.33 2.96 - 0.47 -6.09 -8.17 - -5.65 -7.0 -4.41 -3.88 -6.33 -4.17 0.61 -4.62 -3.37 -3.29 -4.24 - -2.91 -3.78 -4.59 -3.41 -6.76 -3.03 -3.36 -3.53 -2.47 -2.73 -4.2 - - -3.7 -2.94 -2.13 -2.85 -2.5 -2.85 -3.1 -0.96 -2.81 -3.01 -3.03 -4.83 -3.0 -2.13 0.02 0.01 -1.07 -2.81 -3.72 -3.67 -4.43 -1.96 -
- -3.84 -4.48 5.59 2.28 - -0.4 - - - - - -1.99 -4.01 -4.13 -5.53 1.02 -4.47 -2.61 - - - -4.55 -4.31 -4.55 - -5.29 - - -4.17 -5.14 -4.99 -5.68 - - - - -3.34 - - - -4.85 - - - -4.98 -5.74 - -2.31 -2.4 -1.86 -4.36 -7.19 - -2.72 - -4.0 -
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- - -5.11 5.6 0.25 - 1.35 - - - - - -3.14 - - - 1.78 -4.64 - - - -3.76 - - -4.36 - - -4.75 - - -4.53 -3.89 - - - - - - - - - -4.16 - - - - - - -1.33 -1.0 -0.56 - -5.93 - -3.64 - -3.94 -
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Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.