Heatmap: Cluster_142 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00001p00233350 (evm_27.TU.AmTr_v1.0_scaffold00001.252)
- - - - -0.55 - 2.28 - 1.41 1.35 - -0.18 -2.06 -0.09 -1.5 - -2.16 1.22 0.59 0.95 1.28 -1.23
AMTR_s00001p00255560 (evm_27.TU.AmTr_v1.0_scaffold00001.337)
-0.6 0.56 - -1.67 1.72 0.56 1.1 -0.52 0.12 0.09 -0.04 -0.17 -0.08 -0.45 -0.37 -0.44 0.01 -0.36 -0.18 -0.64 -0.83 -0.24
AMTR_s00002p00148780 (evm_27.TU.AmTr_v1.0_scaffold00002.114)
1.06 -0.24 -0.85 -4.04 2.3 -8.04 1.2 -0.5 0.93 0.79 -0.95 0.14 -0.78 -0.04 0.52 -2.46 -0.76 -2.81 -2.7 -1.5 -3.79 -0.37
AMTR_s00002p00255070 (evm_27.TU.AmTr_v1.0_scaffold00002.389)
- - - - 3.49 - 3.43 - - - - - - - - - - - - - - -
AMTR_s00002p00259430 (evm_27.TU.AmTr_v1.0_scaffold00002.434)
- - - - -1.63 - -1.86 - 2.18 1.99 - - - -1.97 3.24 - - - 1.45 -1.17 - -
AMTR_s00005p00257760 (evm_27.TU.AmTr_v1.0_scaffold00005.182)
- - - - 2.56 - -0.46 - 2.92 1.15 - - 1.39 1.29 -0.89 - - - - - - -
AMTR_s00006p00234700 (evm_27.TU.AmTr_v1.0_scaffold00006.105)
- - - - 2.13 - 2.82 - 3.0 1.35 - - - - - - - - - - - -
AMTR_s00007p00073270 (evm_27.TU.AmTr_v1.0_scaffold00007.39)
- - - - 1.84 - 2.94 - 3.19 0.68 - - - - - - - - - - - -
AMTR_s00010p00204620 (evm_27.TU.AmTr_v1.0_scaffold00010.196)
-1.24 -1.47 -1.49 -4.58 1.3 -0.27 0.73 0.88 2.19 2.48 -3.43 -0.59 -2.05 0.47 0.01 -3.22 -4.0 -7.36 -7.82 -6.97 -9.1 -1.7
AMTR_s00010p00265830 (evm_27.TU.AmTr_v1.0_scaffold00010.514)
-0.73 -0.11 -0.62 -2.43 1.74 -0.1 0.88 -1.92 1.11 0.37 0.5 0.08 -0.46 -0.8 1.68 -2.24 -0.12 -2.07 -2.21 -3.36 -5.98 0.16
AMTR_s00011p00223810 (evm_27.TU.AmTr_v1.0_scaffold00011.99)
- - - - 2.48 - 2.44 - 0.94 1.29 -0.25 - -2.95 -0.33 0.73 - - - - 1.68 - -
AMTR_s00011p00260470 (evm_27.TU.AmTr_v1.0_scaffold00011.191)
- - - - 3.8 - - - 2.4 1.47 - - - - - - - - - - - -
AMTR_s00012p00208000 (evm_27.TU.AmTr_v1.0_scaffold00012.145)
- - - - 3.64 - 0.71 - 1.95 1.44 -0.88 - -4.24 -1.07 - - - - - -3.99 - -2.14
AMTR_s00013p00155440 (evm_27.TU.AmTr_v1.0_scaffold00013.79)
- - - -5.25 1.49 1.23 1.57 -1.97 1.67 1.37 -0.6 1.39 -1.73 -0.89 0.77 -0.76 -0.78 - -2.71 -3.06 -2.77 -1.27
AMTR_s00013p00182670 (evm_27.TU.AmTr_v1.0_scaffold00013.112)
0.31 -0.99 -2.03 0.24 -0.23 -0.54 0.37 -4.13 0.92 0.76 0.26 0.44 0.33 0.34 2.0 -1.86 -0.06 -0.88 -0.87 -1.72 -3.32 -0.83
AMTR_s00018p00159390 (evm_27.TU.AmTr_v1.0_scaffold00018.89)
- - - - 2.21 - - - 3.93 1.06 - - - - - - - - - - - -
AMTR_s00018p00244670 (evm_27.TU.AmTr_v1.0_scaffold00018.154)
- - - 0.16 1.3 - 1.72 0.94 1.58 2.04 - - -3.16 -1.37 2.16 - -1.39 - - -0.98 - -2.05
AMTR_s00021p00219830 (evm_27.TU.AmTr_v1.0_scaffold00021.204)
- - - - 2.93 1.66 1.52 -1.12 1.65 1.65 - - -1.99 -1.27 -0.06 - - - - - - -
AMTR_s00021p00219980 (evm_27.TU.AmTr_v1.0_scaffold00021.205)
- - - - 1.26 - 2.15 - 2.9 1.81 - - 0.12 - 1.65 - - - - - - -
AMTR_s00023p00129920 (evm_27.TU.AmTr_v1.0_scaffold00023.67)
- - - - 2.19 - 1.21 - 1.43 1.11 0.23 0.81 -0.86 -0.93 1.69 - 0.73 -0.97 -1.95 -2.63 - -1.1
AMTR_s00023p00131030 (evm_27.TU.AmTr_v1.0_scaffold00023.72)
- - - -3.89 2.23 - 0.82 - 1.53 1.65 0.55 0.36 -0.44 0.52 1.56 -0.21 -1.78 - - - - -1.23
AMTR_s00023p00207280 (evm_27.TU.AmTr_v1.0_scaffold00023.151)
- - - - 2.3 - 0.65 - 1.77 1.68 - 0.88 -1.63 -2.0 1.15 1.32 -0.18 - - -0.55 - -2.14
AMTR_s00023p00246200 (evm_27.TU.AmTr_v1.0_scaffold00023.220)
- - - - 3.09 - 1.29 - 1.38 1.03 - - 0.02 0.46 2.0 - - - - - - -
AMTR_s00026p00144080 (evm_27.TU.AmTr_v1.0_scaffold00026.68)
- - - - 2.76 - 1.64 - 2.8 2.17 - - - -2.12 - - - - - -1.27 - -
AMTR_s00027p00088280 (evm_27.TU.AmTr_v1.0_scaffold00027.28)
- - - - 1.32 - 1.54 - 2.45 2.12 - - - - 2.77 - - - - - - -
AMTR_s00027p00236290 (evm_27.TU.AmTr_v1.0_scaffold00027.129)
- - - - 3.5 - - - 2.82 1.86 - - - - - - - - - - - -
AMTR_s00029p00143960 (evm_27.TU.AmTr_v1.0_scaffold00029.168)
- - - -1.92 -3.39 - 2.36 -5.12 1.24 1.27 -4.23 -0.86 -2.01 -0.65 -3.31 0.79 -0.91 1.61 0.23 -0.5 0.9 0.06
AMTR_s00032p00119630 (evm_27.TU.AmTr_v1.0_scaffold00032.83)
0.46 -1.0 -0.44 -0.19 2.43 0.8 1.15 0.98 0.21 0.42 -1.83 -1.63 -0.86 -0.62 -0.3 -2.42 -1.21 -2.63 -1.36 -1.6 -2.33 -1.4
- - - - 3.06 - 1.59 - 2.8 1.88 - - - - - - - - - - - -
AMTR_s00040p00218940 (evm_27.TU.AmTr_v1.0_scaffold00040.236)
- - - - 1.84 - -0.71 - 2.94 1.66 - - 0.19 1.27 1.2 - - - - 0.17 - -
AMTR_s00040p00219580 (evm_27.TU.AmTr_v1.0_scaffold00040.243)
- - - - 1.71 - -0.32 - 3.24 1.77 0.1 1.88 - - - - - - - - - -1.8
- - - - - - - - 2.55 0.23 - - 1.28 0.82 3.17 - - - - 0.84 - -
- 1.63 - - 2.95 - 1.93 - 0.59 0.85 0.19 - -1.72 -0.06 0.3 - -1.66 - - -3.39 - -
AMTR_s00046p00063690 (evm_27.TU.AmTr_v1.0_scaffold00046.20)
- - - - 3.26 - 0.97 - 0.85 1.59 - - -1.57 0.12 -2.11 - - - - -1.58 1.74 -1.77
AMTR_s00046p00218560 (evm_27.TU.AmTr_v1.0_scaffold00046.150)
- - - - 2.95 - 0.02 - 1.32 1.26 - 1.33 -0.87 0.13 2.01 - - - - -2.55 - -
AMTR_s00050p00076390 (evm_27.TU.AmTr_v1.0_scaffold00050.14)
-0.32 -0.62 -2.46 -2.72 0.78 - 0.97 -6.97 0.58 1.25 -0.15 0.29 -1.19 -0.69 1.46 -1.96 -0.27 0.78 0.32 -0.43 -2.33 0.81
AMTR_s00050p00076540 (evm_27.TU.AmTr_v1.0_scaffold00050.15)
-0.95 0.55 -0.84 -2.58 0.68 0.05 -0.04 -4.71 -0.1 0.36 0.42 0.32 -1.02 -0.82 1.09 -1.83 0.94 0.82 0.41 -0.57 -0.93 0.2
AMTR_s00053p00037150 (evm_27.TU.AmTr_v1.0_scaffold00053.16)
- - - - 3.46 - 0.76 - 0.4 0.95 - - -0.31 -0.4 0.93 - - - -0.25 - 0.57 -2.18
AMTR_s00053p00106730 (evm_27.TU.AmTr_v1.0_scaffold00053.61)
- - - - 2.56 - 2.33 - 2.19 1.92 - - - -0.84 -0.97 - - - 0.7 - - -
AMTR_s00053p00177370 (evm_27.TU.AmTr_v1.0_scaffold00053.124)
- - - - 3.38 - 2.22 0.42 -0.69 0.87 - - 0.94 - 0.29 - - - - - - -
AMTR_s00053p00184940 (evm_27.TU.AmTr_v1.0_scaffold00053.133)
- - - - 3.53 - 3.12 - - 0.84 - - - - - - - - - - - -
AMTR_s00053p00191900 (evm_27.TU.AmTr_v1.0_scaffold00053.142)
- - - - 3.48 - 2.38 - -0.48 1.16 - - -5.42 -0.94 0.39 - -1.79 - - -5.06 -1.15 -4.81
AMTR_s00056p00173510 (evm_27.TU.AmTr_v1.0_scaffold00056.151)
- - - - 3.53 - -0.85 - 1.61 0.25 - - -1.12 - 1.19 - - - - -1.38 1.32 -
AMTR_s00057p00163870 (evm_27.TU.AmTr_v1.0_scaffold00057.158)
- - - - 3.34 - - - 3.45 -0.02 - - - - - - - - - - - -
AMTR_s00057p00163910 (evm_27.TU.AmTr_v1.0_scaffold00057.159)
- - - - 2.33 - - - 3.91 -0.15 - - -0.02 - - - - - - - - -
AMTR_s00058p00187110 (evm_27.TU.AmTr_v1.0_scaffold00058.184)
0.33 -0.39 -0.47 -3.48 1.12 -0.85 1.24 -2.09 0.93 0.99 -0.02 -0.19 0.2 -0.1 0.95 -0.99 -0.96 -1.3 -1.02 -0.09 -0.75 -0.66
AMTR_s00059p00188700 (evm_27.TU.AmTr_v1.0_scaffold00059.207)
1.01 - 1.19 -3.79 0.87 - -0.51 -0.64 2.03 2.28 -1.43 -1.91 -0.96 -0.28 0.14 -1.48 -3.05 -0.52 -1.22 -0.67 - -2.52
AMTR_s00059p00203570 (evm_27.TU.AmTr_v1.0_scaffold00059.229)
- - - - 2.78 - 2.78 - - 0.27 - - - - 2.82 - - - - - - -
AMTR_s00060p00127070 (evm_27.TU.AmTr_v1.0_scaffold00060.66)
- - - - 2.14 - -1.61 - 2.99 2.06 - - 1.19 -0.81 -0.46 - - - - -1.07 - 0.15
AMTR_s00064p00210550 (evm_27.TU.AmTr_v1.0_scaffold00064.108)
- - - - 1.19 - 1.89 - 1.05 1.5 -1.29 -1.11 -3.02 -0.17 -0.14 -1.09 -2.66 0.51 0.84 0.59 1.45 -2.08
AMTR_s00064p00210970 (evm_27.TU.AmTr_v1.0_scaffold00064.109)
- - - - 0.33 - 1.88 -4.43 0.49 1.18 -0.59 - -3.93 -0.67 -0.52 -1.34 - 0.62 2.51 1.16 0.46 -3.98
AMTR_s00069p00105500 (evm_27.TU.AmTr_v1.0_scaffold00069.67)
- - - - 2.66 - 1.56 - 1.52 1.14 - 2.72 - -2.24 -1.41 - - - - - - -1.08
AMTR_s00069p00181550 (evm_27.TU.AmTr_v1.0_scaffold00069.177)
0.28 - - -5.08 1.89 - -3.65 0.39 2.67 2.57 -5.8 -1.02 -5.71 -5.94 1.02 -6.83 -4.16 -6.46 -2.66 -2.08 -1.86 -6.44
AMTR_s00071p00016530 (evm_27.TU.AmTr_v1.0_scaffold00071.6)
- - - - 3.45 - - - 2.95 - - - 0.57 - - - - - - 0.89 - -
AMTR_s00078p00147080 (evm_27.TU.AmTr_v1.0_scaffold00078.121)
-0.51 -0.74 -1.26 -4.46 1.75 0.07 0.8 0.1 -0.3 -0.04 0.37 0.26 0.54 -0.35 0.28 -1.45 0.6 -0.37 -0.44 -0.87 -1.29 -0.09
AMTR_s00084p00072120 (evm_27.TU.AmTr_v1.0_scaffold00084.16)
- - - - 2.38 - 0.2 - 2.82 2.12 - - -0.9 - 1.01 - 0.77 - - - - -
AMTR_s00086p00117950 (evm_27.TU.AmTr_v1.0_scaffold00086.62)
- - - - 2.21 - 2.6 - 1.97 0.84 - - - -1.17 2.37 - - - - - - -
AMTR_s00088p00113900 (evm_27.TU.AmTr_v1.0_scaffold00088.77)
- - - - 3.39 - -0.66 -4.76 1.73 0.75 -1.02 -1.81 -0.99 -2.0 0.12 -2.38 -0.71 -2.01 -1.07 -1.55 0.16 -1.87
AMTR_s00089p00099110 (evm_27.TU.AmTr_v1.0_scaffold00089.54)
-0.89 1.28 - - 2.82 - 0.6 -6.48 0.75 0.57 -1.23 -1.76 -1.92 -0.02 0.59 - -0.22 -1.21 -0.13 -0.46 -0.37 -3.51
AMTR_s00089p00115940 (evm_27.TU.AmTr_v1.0_scaffold00089.63)
- - - - 2.67 - - - 3.97 - - - - - - - - - - - - -
AMTR_s00106p00132730 (evm_27.TU.AmTr_v1.0_scaffold00106.103)
- - - 0.13 3.6 - 0.16 - 2.42 0.62 - - - - -0.45 - - - - - - -
AMTR_s00111p00148930 (evm_27.TU.AmTr_v1.0_scaffold00111.133)
-0.27 - 0.15 -0.98 -3.43 -2.5 2.05 -3.75 1.22 0.85 -1.33 -0.47 -0.9 -0.55 -1.69 -1.91 -0.28 0.92 0.36 0.76 0.47 -0.1
AMTR_s00112p00148080 (evm_27.TU.AmTr_v1.0_scaffold00112.39)
1.17 - - -3.96 1.74 - 1.27 -3.64 2.24 1.61 -3.87 - 0.25 0.52 -1.9 -2.66 -4.23 - -2.26 1.16 -1.44 -3.34
AMTR_s00129p00115010 (evm_27.TU.AmTr_v1.0_scaffold00129.87)
- - - - 2.08 - -1.43 - 2.9 2.02 - 0.87 - -4.27 1.54 -0.69 -3.11 -1.32 - - - -
AMTR_s00131p00088800 (evm_27.TU.AmTr_v1.0_scaffold00131.61)
- - - - 2.93 - 2.99 - 0.3 0.54 - - - -0.99 1.71 - - - - - - -
AMTR_s00135p00042190 (evm_27.TU.AmTr_v1.0_scaffold00135.10)
- - - - 3.38 - 1.72 - 2.74 0.68 - - - - - - - - - - - -
AMTR_s00136p00088390 (evm_27.TU.AmTr_v1.0_scaffold00136.45)
- -6.38 1.62 -6.88 2.44 -3.38 1.26 -6.18 0.79 0.49 0.02 0.08 -0.45 -0.67 0.24 -4.07 -0.23 -1.38 -1.32 -1.37 -0.69 -0.9
AMTR_s00152p00028770 (evm_27.TU.AmTr_v1.0_scaffold00152.5)
-1.34 -1.67 -4.01 -1.96 1.11 0.56 1.6 -1.1 0.79 0.71 -0.12 -0.46 -0.24 0.2 0.87 0.39 -0.51 -0.77 -0.57 -0.54 -1.23 -0.74
AMTR_s00158p00077100 (evm_27.TU.AmTr_v1.0_scaffold00158.17)
- - - - 2.53 - 2.5 - -0.03 0.12 - -0.21 -3.93 -0.31 -0.62 2.45 -1.85 - - - - -1.45
AMTR_s00164p00062120 (evm_27.TU.AmTr_v1.0_scaffold00164.27)
- - - - 2.28 - -0.17 -1.38 2.65 1.78 -1.17 1.03 -2.56 -1.75 0.73 - -1.42 -1.17 -1.23 -2.54 - -2.96
AMTR_s00174p00067570 (evm_27.TU.AmTr_v1.0_scaffold00174.35)
- - - - 2.89 - - - 3.65 0.64 - - -2.48 - -1.89 - - - - - - -
AMTR_s00176p00044310 (evm_27.TU.AmTr_v1.0_scaffold00176.19)
-1.96 - 1.0 -0.64 1.89 0.55 1.22 -1.16 0.47 0.47 -0.54 -1.78 -1.27 -0.51 -0.15 0.12 -0.89 -0.65 -0.39 0.0 -0.54 -0.61
AMTR_s00194p00019170 (evm_27.TU.AmTr_v1.0_scaffold00194.7)
- - - - 2.34 - 2.88 - 1.9 1.23 - - -2.45 -0.44 - - 0.96 - - -1.75 - -1.68
AMTR_s00202p00032250 (evm_27.TU.AmTr_v1.0_scaffold00202.11)
- - - - 3.35 - 1.0 - 2.01 1.58 - - -1.05 -1.52 0.83 - - - - -2.78 - -
AMTR_s00202p00032320 (evm_27.TU.AmTr_v1.0_scaffold00202.12)
- - - - 2.71 - 1.38 - 1.83 1.52 - 1.86 - -1.27 0.83 - -1.28 - - -2.17 - -
AMTR_s00220p00023690 (evm_27.TU.AmTr_v1.0_scaffold00220.3)
-1.71 0.42 -1.75 -5.72 1.77 - 0.24 -1.73 0.52 1.47 0.2 -0.06 0.11 -0.58 1.01 -0.76 0.95 -1.2 -1.42 -0.76 -1.57 -0.31
AMTR_s00260p00018650 (evm_27.TU.AmTr_v1.0_scaffold00260.3)
- - - -6.25 1.67 - 1.56 - 1.31 1.6 -2.22 -0.47 -0.18 -0.05 2.35 -3.21 -3.42 -2.25 -1.58 0.27 -1.99 -1.97
AMTR_s00417p00007300 (evm_27.TU.AmTr_v1.0_scaffold00417.2)
- - - -2.03 2.61 - 1.94 -2.55 1.53 2.03 - 0.58 - -0.36 1.28 - - - - - - -
AMTR_s02234p00007680 (evm_27.TU.AmTr_v1.0_scaffold02234.1)
-0.86 - - -7.13 2.77 0.5 1.66 1.48 0.71 0.9 -2.94 -1.02 -4.12 -1.36 1.14 -3.08 -2.8 - -5.68 -5.03 -6.33 -2.78
AMTR_s04521p00003460 (evm_27.TU.AmTr_v1.0_scaffold04521.1)
- - - - 2.21 - 0.34 - 3.14 1.35 2.26 - - - - - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.