Heatmap: Cluster_49 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Ovary
Microspore
Generative cell
Pollen
Sperm cell
Pollen grain
Pollen tube
Pollen tube (1.5h)
Pollen tube (3h)
Pollen tube (9h)
Pistil
Style (before flowering)
Style (after flowering)
Style (pollinated, after flowering)
Flower (buds)
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Pericarp/Exocarp (4 DPA)
Pericarp
Pericarp (5 DPA)
Pericarp (7 DPA)
Pericarp (10 DPA)
Fruit (mature green)
Fruit (breaker stage)
Septum (7 DPA)
Septum (10 DPA)
Septum/Seed (4 DPA)
Seed (5 DPA)
Seed (7 DPA)
Seed (10 DPA)
Seeds (10 DPA)
Seeds (20 DPA)
Seeds (30 DPA)
Seeds (Pk-stem)
Seeds (Br-stem)
Seeds (Pk-equatorial)
Seeds (Pk-stylar)
Seeds (Br-stylar)
Seeds
Seeds (RR)
Seeds (LR)
Seeds (MG-equatorial)
Hypocotyl
Seedling (leaves)
Seedling (roots)
Callus
Meristem (vegetative)
Meristem
Apical meristem
Leaf
Root
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root hair cells
-5.48 -4.32 -4.42 5.62 -3.16 -7.84 -1.59 -3.86 -5.63 -10.93 -10.76 -9.31 1.37 -7.6 -8.24 -7.92 -6.22 -4.21 -3.17 -3.86 -5.85 -7.06 -5.16 -5.64 -5.93 -5.64 -2.84 -4.79 -4.74 -5.99 -5.33 -5.47 -5.37 -2.81 -5.04 -6.17 -5.42 -3.5 -3.52 -4.91 -3.82 -4.01 -5.01 -5.8 -5.74 -1.85 -10.81 -3.73 1.92 -2.95 -8.42 -6.67 -3.4 -8.21 -5.73 -4.72 -5.24 -8.11
-6.64 -5.21 -5.14 5.61 -2.92 -10.66 -2.58 -4.67 -6.6 -11.06 -12.35 -9.93 1.75 -5.38 -5.88 -5.53 -5.24 -4.64 -4.06 -5.37 -6.16 -5.47 -6.35 -5.91 -5.76 -6.92 -2.14 -5.18 -3.81 -6.78 -5.95 -5.73 -5.21 -3.9 -5.09 -6.14 -3.42 -3.45 -2.99 -3.87 -3.22 -3.59 -4.1 -4.91 -4.56 -6.82 -7.14 -3.93 1.87 -4.34 -5.4 -7.94 -4.01 -5.96 -5.81 -4.63 -5.53 -5.12
-1.76 -2.42 - 5.8 -3.14 - -4.76 - -6.68 - -5.51 -4.96 -2.19 -2.47 - -6.55 -1.32 -4.77 - - - - - - - -5.02 -5.65 -4.54 -5.06 - -2.19 -2.96 -4.65 - - - - -4.22 - - - -3.9 -2.97 - - - - - -4.75 - - - -7.43 - - - - -
-4.76 -4.06 -4.49 5.55 2.68 - -0.06 -3.43 -3.39 -7.41 - -7.21 -2.69 -4.55 - -5.5 -3.18 -4.34 - - - -4.08 - - -5.6 - - - -4.52 - - - -5.31 - -2.27 - - -2.8 -2.06 -2.94 - -3.6 -3.92 -2.02 -2.06 -4.95 - -4.86 0.2 -3.58 -5.65 - -4.8 -1.79 - - - -
- -8.75 - 5.71 1.68 - 1.12 -9.01 -8.6 - -11.54 - -5.26 -8.13 -11.39 -9.24 -3.87 -6.29 - - -9.1 - - -9.9 -9.9 - - -8.05 -9.13 -10.14 -8.08 -9.3 -8.31 - - - - - -7.31 - - -11.89 - - - - - - -7.48 - - - -10.97 - - - - -
-5.82 -5.46 -5.96 5.79 -4.5 - -2.75 -7.99 - - - - -3.87 -4.9 -4.14 -4.72 -2.42 - - -4.7 -2.95 - -3.82 -3.31 -3.26 -4.03 -5.81 -2.43 -3.42 -2.39 -2.62 -2.78 -2.74 - - - - - - - - - -4.84 - - -5.39 -8.21 -5.03 -3.32 -3.61 -6.53 - -7.48 - -4.65 -4.9 -4.01 -
-2.9 - -3.18 5.46 2.24 -5.97 -0.49 -6.01 -7.21 -7.3 -7.39 - -3.16 -0.56 -1.42 -1.42 -0.4 -3.08 - -5.48 -1.65 -1.26 -2.54 -1.76 -1.8 -2.44 -4.5 -1.37 -1.23 -1.65 -2.36 -1.77 -0.88 -1.99 -0.55 - - - - - - -5.76 - - - -4.31 -7.14 -3.95 -4.48 -2.62 -1.55 -4.16 -4.45 -4.01 -3.98 - -5.4 -3.26
- - - 5.52 2.92 - 2.09 -8.65 - - -6.2 - -6.76 - - - -4.72 - - - - - - - - - - - - -5.23 - -7.63 - - - - - - - -4.23 - -8.36 - - - - - - -5.03 - - - -9.57 - - - - -
- - -6.22 5.79 0.57 -6.38 -2.31 -7.12 -6.34 -5.59 -5.92 -6.7 -5.21 -7.68 -7.11 - -4.32 -6.85 - - -4.51 - -5.57 -4.05 -4.91 -6.92 - -3.42 -4.79 -3.88 -2.48 -2.77 -4.42 - - -4.79 - - - -5.41 - - - - - -7.15 -4.95 - -4.05 - -7.05 -5.85 -5.42 - - - - -
-1.9 -0.71 - 5.44 -2.01 -0.06 -0.27 -0.22 -0.18 -0.07 -0.07 -0.09 -4.19 -4.34 - -4.02 0.48 -0.98 -4.88 -5.48 -3.28 - -2.75 -3.53 -4.09 - -7.2 -1.35 -5.13 -1.93 -0.87 -1.41 -2.45 -0.05 -0.76 -5.38 -2.71 -3.88 -3.66 -3.67 - -2.91 -4.52 - -1.43 -4.28 -3.8 - -3.09 - - -3.95 -4.34 -5.51 - - - -
-3.98 -5.08 -6.65 5.8 -1.45 - -3.06 -8.21 - - - - -2.71 -5.0 - -1.81 -2.52 -4.46 - -6.38 -6.76 -3.36 -6.63 -7.24 - - - -6.04 -6.79 -5.95 - -5.14 -6.12 - -4.36 -4.34 -4.6 -4.71 -2.56 - -3.56 -3.26 - - -3.06 - - - -3.49 - - -6.48 -5.92 - - - - -
-2.53 -5.46 -4.62 5.81 -2.5 - - - - - - - -1.53 -4.19 -6.48 -2.83 -2.71 -3.82 - -5.84 - - -6.29 -6.57 - -4.42 - - -6.71 - - -6.08 -6.19 -3.21 -3.08 -4.8 - - - - - -6.99 - - -2.52 -6.61 - - -4.76 - - - -9.74 -4.73 - -5.59 -5.7 -
-0.73 -0.89 -3.35 5.3 2.51 - 1.35 -5.97 -6.88 -7.51 - - -0.84 -3.97 -4.86 -4.73 -1.6 -5.02 -1.3 -1.83 -2.2 -5.73 -2.7 -2.62 -3.33 -3.14 -4.04 -1.36 -2.7 -1.64 -2.69 -1.7 -1.58 -2.32 -3.19 -3.97 -2.59 -3.54 -1.54 -2.59 - -3.44 -4.13 -1.5 - -4.67 -2.85 -2.23 -1.09 -1.32 -0.43 -3.41 -3.25 -3.61 -3.17 -3.7 -1.41 -1.04
-2.16 -2.2 -4.81 5.49 2.81 - -0.92 -5.28 -5.27 - -7.24 - -1.46 -1.99 -4.06 -3.45 -3.33 -4.25 -3.0 -1.14 -3.98 - -3.19 -3.65 -5.07 -4.61 -6.55 -3.31 -2.91 - -3.83 -3.46 -3.94 - -2.59 - -2.68 -4.59 -2.64 -3.08 - -3.6 -3.65 -1.6 -3.6 -3.64 -6.93 -1.56 -1.52 -3.67 -3.35 -5.24 -4.81 -1.88 -3.06 -4.05 -3.33 -
- - - 5.85 -2.84 - -3.49 -6.49 - - -7.56 -6.81 -4.0 -7.74 - - -5.07 - - - - - - - - - - - - - - -7.9 - - - - - - - - - -8.56 - - - - - - -3.81 - - - -6.63 - - - - -
-1.8 -2.54 -3.73 5.68 -2.54 - -3.6 -7.4 -9.64 -9.57 -9.34 -9.37 -3.68 -4.32 -4.34 -4.6 -2.65 -5.06 -3.3 -4.07 -1.88 -4.17 -2.55 -2.27 -1.99 -3.65 -3.72 -1.41 -1.83 -1.6 -1.45 -1.72 -2.27 -3.5 -3.27 -4.78 -3.56 -5.44 -5.3 -3.81 -5.3 -4.16 -4.63 -4.26 -4.46 -4.4 -7.97 -3.55 -3.07 -2.26 -0.95 -4.06 -4.06 -4.67 -2.39 -2.68 -2.11 -3.12
-6.98 - - 5.85 -4.09 - -3.87 -7.64 -9.98 - -7.97 -8.75 -4.11 -6.97 -7.71 -7.95 -3.16 -9.29 - - - - - - - -7.64 - - -6.75 -5.66 -6.6 -5.39 -6.63 - - - - - - - - -8.41 - - - -6.88 - - -5.21 - -7.22 - -6.0 - - - - -
0.39 -0.11 -1.53 5.24 -0.4 -6.9 1.66 -5.67 -6.92 -7.01 -7.58 -7.29 -1.68 -2.03 -2.1 -2.0 -0.15 -2.96 -1.71 -2.08 -3.33 -5.6 -2.55 -3.01 -3.45 -2.74 -4.72 -2.19 -3.93 -2.27 -0.63 -0.68 -1.41 -1.61 -0.82 -2.11 -2.46 -2.52 -2.46 -2.4 -1.96 -2.32 -2.12 -3.19 -2.16 -5.67 -5.44 -1.15 -3.58 -1.07 -1.92 -4.33 -3.25 -1.46 -4.29 0.12 0.16 0.21
-1.6 -4.18 -0.98 5.44 1.93 - 1.87 -2.48 -3.9 - -6.17 - -1.76 -2.94 -4.11 -3.61 -0.39 -2.61 -1.87 -4.33 -5.1 - - -3.02 -2.4 - -5.05 -5.1 -2.05 - - -5.18 -2.71 -1.71 -0.15 - -2.61 -3.62 - - -1.51 -3.03 - - - -3.76 - -1.44 -0.91 -4.0 -4.66 - -4.19 -1.26 - - - -
-2.84 -2.2 -6.17 5.42 1.85 - -0.67 -6.38 -7.57 - - - 0.27 -0.8 -1.61 -2.3 -0.55 -2.45 - - -5.67 0.58 -4.58 -3.77 -4.33 -4.18 -0.38 -1.73 -3.22 - -4.59 -4.08 -3.14 - -2.27 -4.2 -2.3 -3.36 -0.62 -3.72 - -1.76 -1.63 - -3.37 -4.07 - -2.51 0.36 -3.28 - -3.46 -2.59 -2.3 -3.57 -3.46 - -
-6.78 -7.02 -3.42 5.52 3.11 -4.38 0.63 -4.34 -5.44 -6.06 -5.33 -5.52 -1.85 -5.36 -8.16 -5.86 -2.62 -4.44 - -7.11 -3.88 - -4.98 -4.66 -5.98 -5.97 - -3.64 -3.55 -4.8 -4.82 -4.02 -5.01 -4.62 - - - -4.98 -4.42 -3.44 - -4.65 -4.36 -3.39 -4.58 -5.72 -6.68 -4.38 -4.43 -5.97 -6.02 -5.18 -4.34 -5.83 -5.91 - -5.59 -
-9.07 - -9.63 5.83 -4.42 -3.16 -4.49 -4.33 -5.05 -2.86 -2.67 -2.54 -5.27 -6.89 -8.92 -8.0 -2.34 -2.21 -6.82 - -8.61 - -8.61 -8.79 - -9.48 -9.17 -8.77 -7.65 - -7.66 -7.73 -7.94 - - - - - - - - -10.79 - - -7.61 - -10.81 -10.26 -6.49 -8.4 - - -8.68 -8.37 - -8.71 -9.07 -
-7.13 - -6.28 5.85 -4.25 - -5.13 -7.91 - - -8.18 - -7.22 -5.99 -7.96 - -3.74 -7.16 - -7.26 -7.6 -6.91 - - - - - - - - - - -9.06 - - - - - - - - -9.57 - - - - - -6.23 -8.25 - - - -9.04 - - - - -
-1.89 -2.49 -2.08 5.65 -3.58 -4.28 -2.7 -2.32 -2.93 -6.22 -5.0 -6.82 -2.09 -1.14 -0.43 -0.72 -0.82 -1.41 -4.36 -4.0 -4.08 - -3.11 -3.91 -5.1 -6.86 - -2.14 -6.8 -3.31 -1.51 -2.69 -3.67 -1.23 -3.06 -5.57 -4.88 -5.79 - - - -5.23 - - - -4.28 -3.78 -3.67 -4.79 -7.45 -3.3 -1.08 -1.87 -5.61 -5.18 -4.33 -4.51 -3.01
-2.74 -4.02 -5.76 5.78 -3.0 -4.18 -4.14 -1.0 -1.64 -5.07 -4.45 -5.01 -3.47 -3.23 -6.69 -3.73 -3.0 -4.68 -4.27 -3.79 -4.22 - -5.02 -4.81 -4.07 -5.73 -8.17 -3.8 -3.9 -4.63 -4.35 -4.84 -4.12 - -4.02 -6.62 - -4.47 - -4.07 - -4.8 -4.64 - - -4.9 -7.75 -4.67 -2.34 -5.66 -4.62 -7.23 -3.29 -5.58 -6.82 - -5.73 -
-2.8 - -4.8 5.57 2.66 - 1.28 -4.44 -6.95 -6.18 - -5.99 -0.95 -3.62 -2.48 -3.12 -3.01 -4.1 - - - - - - - - - - - - -3.99 -6.81 -5.86 - -1.59 - - - - - - - - - - - - - -4.46 - - - -5.31 - - - -4.5 -
-5.69 -7.03 -7.67 5.82 -0.72 -6.76 -1.71 -6.2 -6.34 -6.06 -8.11 -5.94 -5.05 -3.52 -5.58 -5.92 -3.09 - - - - -7.19 - - - - -8.48 - - - - -8.77 - - - - - - - - - -10.09 - - - - - -5.72 -5.76 - - -7.56 -6.46 - - - - -
0.57 0.48 -1.01 5.21 0.66 -2.62 -0.49 -2.36 -2.67 -3.47 -3.5 -3.45 -1.26 -0.85 -0.95 -0.87 -1.37 -2.02 -0.25 -0.74 -1.85 -1.5 -1.47 -2.02 -2.06 -2.21 -1.91 -1.46 -1.53 -1.71 -1.36 -1.79 -1.75 - -1.41 -3.01 -2.61 -3.05 -1.53 -1.81 -3.99 -2.68 -2.87 -2.95 -3.28 -3.87 -4.33 -2.01 -1.02 -0.7 0.16 -1.88 -2.52 -1.91 -1.38 -2.2 -1.41 -1.94
-5.04 -5.65 -5.39 5.49 -0.2 0.29 0.77 0.19 0.15 0.24 0.42 0.42 -3.35 -4.83 -6.31 -4.25 0.19 -1.63 -7.4 -7.96 -6.11 - -8.7 -6.42 -5.82 -7.2 -8.35 -4.85 -6.27 -4.71 -2.82 -2.29 -1.88 -5.06 -3.4 -7.42 - -6.93 -6.18 -5.69 - -8.01 - - -5.9 -10.11 - -9.4 -4.03 -2.06 -2.66 -10.15 -8.62 -8.39 -8.52 -6.55 -4.83 -
0.13 -0.19 -1.56 5.67 -3.31 -5.49 0.09 -5.99 -5.58 -5.84 -5.74 -5.99 -1.61 -2.7 -2.94 -3.15 -1.68 -4.34 -6.62 -8.62 -6.0 -4.4 -4.93 -5.57 -5.69 -8.86 -6.96 -3.86 -4.88 -3.97 -2.14 -2.17 -2.09 -3.51 -1.8 -5.89 -3.51 -4.41 -4.09 -3.09 -4.09 -4.07 -3.57 -4.27 -5.9 -8.38 -8.71 -9.11 -5.89 -2.77 -2.79 -8.84 -7.92 -6.01 -9.14 -9.47 -8.06 -
-5.53 -3.74 -4.76 5.68 0.33 -4.12 0.93 -3.06 -2.37 -3.23 -2.65 -3.44 -2.79 -3.74 -4.55 -3.9 -0.58 -4.06 -3.25 -2.95 - - -4.0 -5.35 -7.1 - -4.69 -4.95 - -5.56 -4.27 -4.24 -4.96 - - - - - - - - -7.17 - - -3.69 - - -3.29 -3.16 -6.22 -4.87 - -3.62 -3.48 -1.03 -3.98 - -4.12
- -5.26 - 5.83 -3.03 - -4.23 -7.97 - - - - -3.96 - - - -0.85 -7.26 - - - - - - - - - - - - - - - -2.79 - - - - - - - - - - - - - - -2.34 - - - -9.39 - - - - -
- - -4.24 5.8 - -2.64 -2.08 -2.49 -2.21 -7.16 -5.3 -7.49 -2.64 -4.22 - -3.42 - -2.76 - - - - - - - -3.46 - - - -3.22 - -4.45 - - -1.82 - - - - - - -6.15 - - - - - - -3.98 - -3.58 -3.03 -4.66 - - - - -
- - - 5.68 1.12 -3.21 1.93 -4.45 -7.03 - - - -4.29 -2.94 -4.19 -4.13 -2.18 -3.01 - - - - - - - - - - - - - - - - - - - - - - - -7.01 - - - - - - -4.47 - - - -8.6 - - - - -
-4.18 -5.67 -6.01 5.75 -5.04 -5.4 -4.97 -5.17 -5.09 -4.59 -4.42 -4.71 -3.84 -6.46 -7.19 -6.9 -2.84 -3.58 -7.63 -5.88 -3.64 -5.63 -6.31 -4.53 -3.41 -5.7 -5.7 -3.69 -2.21 -2.88 -4.86 -2.29 -0.42 -4.01 -0.31 -4.24 -3.28 -3.76 -4.1 -3.43 -5.1 -3.77 -2.72 -3.34 -4.29 -5.8 -7.45 -5.02 -4.18 -6.16 -5.39 -6.82 -5.5 -4.8 -5.04 -5.39 -6.44 -5.2
- -6.32 - 5.73 1.83 -5.2 -0.07 -5.96 -6.31 -5.43 -5.71 -5.6 -5.21 -8.59 - -10.3 -3.31 -7.37 -8.0 - -9.88 - -8.26 -9.58 -11.04 - -9.33 -6.92 - -8.33 -3.94 -6.69 -8.63 - - - - - - - - - - - - - - -10.58 -7.19 - - - -11.67 -8.09 - - - -
- - - 5.85 -4.43 - -5.04 - - -7.79 -7.46 - -4.03 -8.02 - - -4.15 -6.46 - - - - - - - - - - - - - - - - - - -3.45 -5.72 - -4.03 - -4.81 - - - - - - -5.56 - - - -9.73 - - - - -
-1.44 -0.71 -2.46 5.56 -1.96 -0.16 -0.9 -1.04 -1.13 -0.04 0.22 -0.01 -2.76 -3.88 -4.38 -3.7 -3.01 -1.93 - -3.68 -3.4 - -3.68 -4.16 -4.0 - -5.29 -4.08 -2.33 -4.8 -3.27 -3.67 -3.8 - - -5.01 - - -3.22 - - -6.17 - - - -5.09 -7.42 -2.56 -2.85 -1.86 -1.86 -5.17 -5.35 -4.97 -0.23 -5.8 -3.1 -
- - -5.06 5.7 -1.96 -3.53 -3.15 -3.1 -3.38 -4.63 -6.33 -5.74 -5.08 - - -5.89 -1.96 -4.26 - - - - - -5.92 -6.42 -3.86 - - -5.54 -5.36 -4.92 -6.67 - - - - - - - - - -8.39 - - -4.06 -1.73 -2.93 0.2 -4.53 - - -2.6 -2.96 -1.38 0.09 -3.03 - 0.08
-4.73 -5.28 -8.7 5.62 -0.71 - 0.16 -7.89 -7.9 -9.06 - -8.14 -5.08 -6.46 - -7.29 -3.62 -5.82 - -5.21 -3.27 - -4.33 -3.82 -3.65 -6.15 - -2.0 -3.17 -1.81 -0.59 -0.23 -0.02 0.7 0.03 -4.91 -4.22 -5.19 - -6.12 - -6.3 - -4.71 - -5.07 - -3.66 -2.01 - - -7.72 -7.13 -4.78 - - - -
- - -4.56 5.75 0.05 - -0.36 -6.21 -5.57 -4.02 -4.36 -4.33 - -5.9 - - - - - - - - - - - - - - - - - - - 0.78 - - - - - - - - - - - -3.0 - - -3.35 - - - -4.04 - - - - -
-3.63 -3.21 -6.9 5.78 -3.04 -6.72 -2.97 -5.68 -5.77 -6.17 -6.27 -6.81 -2.53 -5.84 - -8.82 -2.65 -7.85 - - -2.13 - -4.97 -3.25 -1.8 -4.13 -8.16 -2.83 -1.7 -2.39 -3.65 -2.53 -2.9 -3.46 -3.87 -5.48 -6.35 -8.21 - -6.18 - -7.07 -7.26 -6.22 -5.76 -7.74 - -8.4 -5.43 -5.65 -6.72 - -12.29 - -8.45 - - -
-3.22 -3.31 -4.32 5.83 -3.71 - -5.92 -6.49 -6.76 - -7.74 - -4.51 -7.9 - - -3.08 -7.93 - - - - - -6.28 -7.53 -5.52 - - -6.22 -5.53 -4.05 -3.4 -4.65 - -4.21 - - -5.6 - - - -7.12 - - - - - -4.22 -2.88 -6.87 -5.86 - -5.21 -4.52 - - -6.05 -
- - - 5.79 - - - - - - - - -3.34 -5.44 - -7.52 -4.14 -2.35 - - - - - - - -4.87 -2.04 - - - - - -8.17 - - - -4.6 -4.03 -3.51 -4.88 - -4.35 -3.44 -3.47 - -4.0 - -2.84 0.02 - - - -6.84 -1.83 - - - -
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Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.