Heatmap: Cluster_24 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00001p00235590 (evm_27.TU.AmTr_v1.0_scaffold00001.264)
- - - - -2.98 - -3.28 - 4.21 1.72 - - - - - - - - - - - -
AMTR_s00002p00271120 (evm_27.TU.AmTr_v1.0_scaffold00002.611)
- - - -3.46 -0.03 - -1.02 - 3.32 2.36 - - -1.18 -0.98 0.62 - -0.87 - 0.1 -1.32 - -0.33
AMTR_s00003p00096740 (evm_27.TU.AmTr_v1.0_scaffold00003.60)
-4.7 - -0.55 -0.83 -6.11 - 0.28 -1.77 3.1 3.01 -2.2 - -1.91 -1.05 -2.95 -1.93 -5.75 -0.56 -5.86 -3.66 -1.87 -2.94
AMTR_s00003p00097080 (evm_27.TU.AmTr_v1.0_scaffold00003.61)
- - - -0.2 -3.57 -3.6 0.55 0.4 2.66 2.81 -1.18 -0.77 -0.21 -1.35 -2.27 -2.54 -1.14 -1.48 -1.37 -1.57 -1.44 -1.69
AMTR_s00003p00244520 (evm_27.TU.AmTr_v1.0_scaffold00003.270)
-1.04 -0.53 - -2.26 -3.61 - -1.03 -1.56 3.19 2.9 -1.23 -0.84 -2.23 -2.34 -3.6 -7.73 0.15 -4.04 -4.58 -5.35 - -1.36
AMTR_s00004p00255270 (evm_27.TU.AmTr_v1.0_scaffold00004.248)
- - - - - - - - 3.49 3.42 - - - - - - - - - - - -
AMTR_s00007p00269020 (evm_27.TU.AmTr_v1.0_scaffold00007.399)
-8.24 -9.08 - -6.53 1.89 - -2.51 -1.1 3.23 2.57 - -1.72 -8.6 -5.15 0.99 -8.5 -5.8 - - - - -11.61
AMTR_s00008p00165580 (evm_27.TU.AmTr_v1.0_scaffold00008.87)
- - - - 1.62 - 0.61 - 2.89 3.27 - - - - -1.67 - - - - - - -
AMTR_s00010p00130170 (evm_27.TU.AmTr_v1.0_scaffold00010.86)
- - - - - - 0.17 - 3.61 3.04 - - - - -1.37 - - - - - - -
AMTR_s00010p00262660 (evm_27.TU.AmTr_v1.0_scaffold00010.473)
- - - - - - -0.84 - 3.76 2.52 - - - -0.67 0.59 - - - - - - -
AMTR_s00010p00263330 (evm_27.TU.AmTr_v1.0_scaffold00010.485)
- -3.06 - - - - -4.13 - 3.85 2.88 - - - - - - - - - - - -
AMTR_s00011p00206810 (evm_27.TU.AmTr_v1.0_scaffold00011.76)
- - - - - - -0.59 - 3.41 2.21 - - - - -3.84 - - 2.58 - - - -
AMTR_s00011p00235740 (evm_27.TU.AmTr_v1.0_scaffold00011.126)
- - - - 0.46 - -1.84 - 3.64 2.95 - - - -2.47 - - - - - - - -
AMTR_s00012p00198620 (evm_27.TU.AmTr_v1.0_scaffold00012.131)
0.14 0.07 - - -4.25 - -3.74 0.01 3.98 1.5 - -5.04 -5.23 -5.44 -7.18 - -5.43 - - - - -
AMTR_s00012p00253030 (evm_27.TU.AmTr_v1.0_scaffold00012.266)
- - - - -0.49 - 0.29 - 3.37 3.15 - - -4.1 -1.38 -2.2 - -2.98 - - - - -
AMTR_s00013p00108490 (evm_27.TU.AmTr_v1.0_scaffold00013.54)
- 2.02 2.22 - -2.85 - -3.58 -1.53 3.25 1.29 -3.59 -2.33 -6.87 - -1.52 - -5.47 - - -3.29 - -7.1
AMTR_s00019p00250590 (evm_27.TU.AmTr_v1.0_scaffold00019.409)
- - - - -5.56 - -5.22 1.42 3.53 2.91 -5.73 -3.58 -9.32 -6.54 -9.97 - - -5.77 - -7.13 - -3.29
AMTR_s00021p00052630 (evm_27.TU.AmTr_v1.0_scaffold00021.21)
- - - - -3.02 - -1.9 - 3.21 3.03 - 0.53 -0.5 0.43 -3.89 - -3.61 - - - -1.82 -1.97
AMTR_s00021p00052910 (evm_27.TU.AmTr_v1.0_scaffold00021.22)
- - - -2.17 -3.03 - -2.25 - 3.47 2.97 - - -2.86 -0.0 - - - - -1.04 - -0.21 -
AMTR_s00021p00053210 (evm_27.TU.AmTr_v1.0_scaffold00021.23)
- - - - -5.12 - -2.6 - 3.52 2.82 - 1.2 -2.08 -0.69 - - - - - - - -3.07
AMTR_s00021p00101880 (evm_27.TU.AmTr_v1.0_scaffold00021.48)
- - - - -3.23 - -0.21 -0.07 3.68 2.75 - -4.72 -7.75 -1.29 -4.78 - - - - - - -
AMTR_s00022p00166250 (evm_27.TU.AmTr_v1.0_scaffold00022.174)
- - - - 0.66 - - - 3.95 2.32 - - - - - - - - - - - -
AMTR_s00025p00090990 (evm_27.TU.AmTr_v1.0_scaffold00025.73)
1.2 - 0.1 -5.11 -5.15 0.11 -2.33 -3.92 2.96 1.31 -1.12 -1.3 0.09 -1.14 -1.82 -2.32 -1.61 -1.21 -1.17 0.84 -0.58 -1.19
AMTR_s00025p00191790 (evm_27.TU.AmTr_v1.0_scaffold00025.236)
-3.57 - - - -5.52 - -2.32 1.92 3.36 2.86 -3.27 - -4.04 -5.11 -8.1 -3.68 - - - - - -3.06
AMTR_s00025p00246180 (evm_27.TU.AmTr_v1.0_scaffold00025.393)
- - - -1.45 0.4 - -0.11 - 3.78 1.89 - 0.34 -0.96 - -2.32 - - - - - - -
AMTR_s00026p00110870 (evm_27.TU.AmTr_v1.0_scaffold00026.48)
- - - - - - -0.95 - 3.65 2.92 - 0.22 - -3.18 -3.47 - - - - - - -
AMTR_s00028p00077900 (evm_27.TU.AmTr_v1.0_scaffold00028.19)
- 1.7 - - -2.89 -5.03 1.27 1.45 2.59 2.2 -3.2 0.33 -2.45 -0.27 -2.41 - -3.67 -3.39 - -7.59 - -3.58
AMTR_s00029p00242570 (evm_27.TU.AmTr_v1.0_scaffold00029.421)
-7.94 - -13.22 -14.25 -9.57 -3.01 1.57 -2.53 2.93 3.27 -8.7 -6.81 -9.39 0.49 -6.92 - - - -8.38 -6.69 - -7.55
AMTR_s00029p00242610 (evm_27.TU.AmTr_v1.0_scaffold00029.422)
-4.76 - -10.34 -5.97 -8.8 -3.59 1.17 -2.63 3.06 3.26 -10.47 -6.98 -9.39 0.59 -7.49 - - -9.87 -7.98 -7.03 - -7.48
-2.18 -0.36 - - -2.57 - 0.34 -2.12 3.35 2.71 -1.93 -1.78 - -2.64 -6.73 -0.75 - - -0.77 - -0.54 -5.49
AMTR_s00033p00094640 (evm_27.TU.AmTr_v1.0_scaffold00033.40)
- - - - -0.48 - 1.27 - 3.4 2.66 - - - -3.14 -0.18 - - - - -0.02 - -
AMTR_s00034p00101930 (evm_27.TU.AmTr_v1.0_scaffold00034.28)
- - - - 1.1 - -1.95 - 3.92 1.62 - - - -2.12 -0.73 - - - - - - -0.99
AMTR_s00034p00238230 (evm_27.TU.AmTr_v1.0_scaffold00034.123)
- - - - -0.69 - - - 3.77 2.91 - - - -2.66 -3.36 - - - - - - -
1.16 -1.15 - -4.03 -1.39 -6.32 -6.63 1.32 3.22 2.76 -6.64 -3.3 -4.0 -7.14 -5.39 - -6.92 -5.67 -7.64 -10.41 - -10.02
AMTR_s00039p00236750 (evm_27.TU.AmTr_v1.0_scaffold00039.227)
-1.58 - - -1.79 -5.54 -2.58 0.61 0.9 3.46 2.44 -1.57 -2.02 -3.01 -1.95 -4.97 -6.04 -4.14 -3.67 -3.45 -4.24 -4.24 -4.47
AMTR_s00041p00121000 (evm_27.TU.AmTr_v1.0_scaffold00041.87)
-0.82 - - -0.82 -1.71 -0.83 -0.1 0.14 2.23 1.42 -0.07 -0.23 0.35 -0.46 0.26 -0.49 -1.52 -1.14 -0.7 -0.22 0.85 -0.37
AMTR_s00041p00214940 (evm_27.TU.AmTr_v1.0_scaffold00041.228)
- - - - -1.61 - -1.18 - 3.7 3.05 - - - - - - - - - - - -
AMTR_s00041p00214990 (evm_27.TU.AmTr_v1.0_scaffold00041.229)
- - - - - - -1.27 - 3.57 3.28 - - - - - - - - - - - -
AMTR_s00041p00216270 (evm_27.TU.AmTr_v1.0_scaffold00041.231)
- - - - - - - - 3.82 2.98 - - - - - - - - - - - -
AMTR_s00041p00217170 (evm_27.TU.AmTr_v1.0_scaffold00041.239)
- - - - 0.94 - 0.79 - 3.89 1.82 - - - - - - - - - - - -
AMTR_s00047p00203430 (evm_27.TU.AmTr_v1.0_scaffold00047.133)
- - - - -0.19 - 1.86 - 2.94 3.07 - - - 0.06 -3.39 - - - - -1.79 - -
AMTR_s00060p00162410 (evm_27.TU.AmTr_v1.0_scaffold00060.99)
- - - - -9.48 - 1.07 -0.06 3.36 2.97 - - - -0.24 -6.94 - - - - -7.42 - -7.99
AMTR_s00061p00156970 (evm_27.TU.AmTr_v1.0_scaffold00061.144)
- - - - 1.17 - - - 3.33 3.08 - -0.2 -3.73 - -1.83 - - - - - - -
AMTR_s00062p00186870 (evm_27.TU.AmTr_v1.0_scaffold00062.185)
- - - - -0.42 - 0.79 - 3.01 1.74 - -0.16 -5.1 -1.16 -3.82 - - - -1.52 -4.44 2.66 -
AMTR_s00062p00215550 (evm_27.TU.AmTr_v1.0_scaffold00062.240)
- - - - - - - -0.15 3.37 3.42 - - -6.44 - - - - - - - - -5.89
AMTR_s00064p00061450 (evm_27.TU.AmTr_v1.0_scaffold00064.17)
-2.36 - - - 0.58 - -2.71 0.07 3.47 2.45 -3.25 0.85 -4.45 -3.74 -4.43 - -3.5 -3.25 -2.23 -4.85 - -4.93
AMTR_s00066p00082890 (evm_27.TU.AmTr_v1.0_scaffold00066.63)
- - - - - - - - 4.0 2.29 - - - -0.79 -0.98 - - - - - - -
AMTR_s00067p00157340 (evm_27.TU.AmTr_v1.0_scaffold00067.156)
- - - - - 0.48 -0.94 0.96 3.47 2.81 - - - -3.91 -8.45 - - - - - - -9.59
AMTR_s00068p00088730 (evm_27.TU.AmTr_v1.0_scaffold00068.44)
- - - -6.53 -10.26 - -9.27 0.39 3.61 3.08 - - -7.34 -6.87 -10.36 - -9.98 - - -10.87 - -12.67
AMTR_s00068p00106280 (evm_27.TU.AmTr_v1.0_scaffold00068.53)
- - - - -7.75 - -7.61 -2.48 2.94 1.6 -0.33 -0.96 -4.08 0.93 -1.8 -0.45 -4.68 -1.0 -1.85 -0.04 2.21 -1.37
AMTR_s00068p00108060 (evm_27.TU.AmTr_v1.0_scaffold00068.54)
- - - - -7.81 - -1.77 - 3.79 2.97 -5.17 - - -8.18 - - - - - - - -6.98
AMTR_s00068p00108630 (evm_27.TU.AmTr_v1.0_scaffold00068.55)
- - - - -2.56 - -1.39 - 3.82 2.85 - - - -3.77 - - - - - - - -
AMTR_s00068p00108670 (evm_27.TU.AmTr_v1.0_scaffold00068.56)
- - - - -3.54 - -0.8 - 3.82 2.82 - - - - - - - - - - - -2.98
AMTR_s00068p00108700 (evm_27.TU.AmTr_v1.0_scaffold00068.57)
- - - - - - - - 3.96 2.5 - - - -1.54 - - - - - - - -1.15
AMTR_s00068p00112600 (evm_27.TU.AmTr_v1.0_scaffold00068.64)
- - - - -4.11 - -6.01 -3.34 3.96 2.63 - - - - - - - - - - - -5.15
AMTR_s00068p00112960 (evm_27.TU.AmTr_v1.0_scaffold00068.65)
- - - - -5.43 - - - 4.04 2.47 - - - - - - - - - - - -
AMTR_s00068p00113570 (evm_27.TU.AmTr_v1.0_scaffold00068.66)
- - - - - - 1.73 - 3.62 2.41 - - - 0.13 - - - - - - - -
AMTR_s00069p00164760 (evm_27.TU.AmTr_v1.0_scaffold00069.139)
- - -3.82 - -3.6 - 1.34 -0.83 3.37 2.79 - - -8.53 0.46 -7.87 - -3.45 - - - - -
AMTR_s00071p00119680 (evm_27.TU.AmTr_v1.0_scaffold00071.94)
- - - -3.01 -0.96 - 0.87 -0.1 2.9 2.11 -0.4 -0.0 -1.56 -0.6 -0.27 -1.89 -2.82 -0.19 -1.97 -0.72 -0.35 -1.8
AMTR_s00074p00132990 (evm_27.TU.AmTr_v1.0_scaffold00074.42)
- - - - -6.15 - -8.7 0.45 3.29 3.42 -7.33 - -9.23 -9.45 - - -6.6 -5.74 -6.72 -7.44 -5.89 -
AMTR_s00074p00133240 (evm_27.TU.AmTr_v1.0_scaffold00074.43)
-4.38 - -1.75 -8.83 -4.29 - -7.94 -0.7 3.44 3.32 -4.99 - -7.91 -7.6 - - -7.94 -6.15 - -9.38 -6.31 -7.32
AMTR_s00079p00009360 (evm_27.TU.AmTr_v1.0_scaffold00079.1)
- - - - -0.63 - -3.21 - 3.55 3.22 - - -4.39 - - - - - - -3.24 - -3.5
AMTR_s00079p00194400 (evm_27.TU.AmTr_v1.0_scaffold00079.125)
- - - - -2.33 - -0.98 - 3.4 1.93 - - - -2.06 -0.63 - - - - -2.82 1.86 1.19
AMTR_s00086p00172110 (evm_27.TU.AmTr_v1.0_scaffold00086.109)
- - - - -0.4 - - - 3.35 3.47 - - - - - - - - - - - -
AMTR_s00099p00041990 (evm_27.TU.AmTr_v1.0_scaffold00099.29)
- - - - -3.14 - 2.38 - 2.99 2.85 - - -3.44 0.53 - - - - - - - -
AMTR_s00102p00131940 (evm_27.TU.AmTr_v1.0_scaffold00102.72)
- - - - 0.05 -2.45 -1.01 0.29 3.24 3.05 - -1.43 -7.26 -3.52 -0.21 - -8.53 - - -10.95 - -7.59
AMTR_s00103p00078910 (evm_27.TU.AmTr_v1.0_scaffold00103.44)
1.64 - - - -1.95 - -4.43 - 3.54 2.64 - -1.42 -2.62 -5.38 -2.84 - - - - -5.94 - -
AMTR_s00103p00080530 (evm_27.TU.AmTr_v1.0_scaffold00103.45)
1.92 - -0.1 -3.61 1.13 - -2.94 - 2.96 2.2 -2.93 -1.06 -1.76 -3.37 0.49 - - - - -4.55 - -4.26
AMTR_s00105p00147220 (evm_27.TU.AmTr_v1.0_scaffold00105.74)
- - - - -0.49 - -2.85 - 3.38 3.07 -1.2 0.58 - -1.95 -3.52 - - - - -3.98 - -
AMTR_s00116p00137450 (evm_27.TU.AmTr_v1.0_scaffold00116.39)
- - - - -0.87 - 1.41 - 3.89 1.97 - - - - - - - - - - - -
AMTR_s00117p00093560 (evm_27.TU.AmTr_v1.0_scaffold00117.35)
- - - - 1.18 - -1.08 - 3.19 3.32 - - - -3.49 -3.66 - - - - - - -
AMTR_s00130p00016510 (evm_27.TU.AmTr_v1.0_scaffold00130.2)
0.64 -0.01 -1.52 -3.01 -5.23 - -3.18 -0.29 3.13 3.17 -5.59 -3.75 -6.08 -5.23 -9.34 -5.9 - -3.94 -4.92 -5.93 - -7.42
AMTR_s00130p00109580 (evm_27.TU.AmTr_v1.0_scaffold00130.52)
- - - - 0.6 - - - 3.64 2.13 - - - - 1.39 - - - - - - 0.03
AMTR_s00136p00011480 (evm_27.TU.AmTr_v1.0_scaffold00136.1)
- - - - -0.87 - - - 3.45 3.27 -1.61 - -0.92 - - - - - - - - -
AMTR_s00137p00069590 (evm_27.TU.AmTr_v1.0_scaffold00137.32)
- - - - 0.22 - -3.03 1.31 3.29 2.83 - - -1.63 -2.55 -1.65 - -3.34 - - -2.0 - -2.62
AMTR_s00140p00020630 (evm_27.TU.AmTr_v1.0_scaffold00140.3)
- - - - -2.14 - - - 3.45 2.92 - 1.28 - - - - - - - - - -0.32
AMTR_s00141p00098030 (evm_27.TU.AmTr_v1.0_scaffold00141.33)
- - - - -0.65 - 1.58 -2.27 2.69 3.08 - - -3.72 0.1 -0.92 - -0.34 - - -0.56 - -3.27
AMTR_s00147p00033730 (evm_27.TU.AmTr_v1.0_scaffold00147.12)
- 1.56 -1.02 -8.71 0.77 -4.79 -2.1 1.64 3.03 2.18 -4.87 -1.94 -3.07 -4.56 -1.61 - -7.83 - - - -6.2 -7.99
AMTR_s00157p00083130 (evm_27.TU.AmTr_v1.0_scaffold00157.45)
1.16 -0.12 -2.3 -2.25 -0.34 - -0.97 0.74 2.94 2.26 -1.28 -1.41 -1.74 -2.56 -2.01 -3.67 -2.12 -4.3 -5.28 -9.25 - 0.13
AMTR_s00161p00053480 (evm_27.TU.AmTr_v1.0_scaffold00161.16)
- - - - 0.15 - -3.99 - 3.78 2.82 - - - - -4.59 - - - - - - -
AMTR_s00174p00063900 (evm_27.TU.AmTr_v1.0_scaffold00174.31)
- - - - -3.78 - 1.01 -4.35 3.88 2.09 -5.01 -3.27 -4.08 -2.71 -5.98 -3.83 -5.41 - - -5.69 - -1.15
AMTR_s00174p00064640 (evm_27.TU.AmTr_v1.0_scaffold00174.33)
- - - - -3.67 - 1.6 0.3 3.65 2.12 - - -4.36 -1.01 -4.24 - - - - - - -2.73
AMTR_s00183p00054850 (evm_27.TU.AmTr_v1.0_scaffold00183.28)
- - - -11.49 -11.07 - -4.7 0.88 3.54 3.08 - - -11.43 -8.18 -12.14 - - - - - - -8.7
AMTR_s00183p00054990 (evm_27.TU.AmTr_v1.0_scaffold00183.29)
- - - - -9.2 - -6.37 -0.52 3.47 3.34 - -4.67 -9.88 -7.97 - - - - - - - -7.63
AMTR_s00184p00044240 (evm_27.TU.AmTr_v1.0_scaffold00184.20)
- - - - 0.18 - 0.24 -2.11 3.11 3.33 - -2.32 - -1.96 -1.64 - - - - - - -
AMTR_s00194p00018830 (evm_27.TU.AmTr_v1.0_scaffold00194.6)
-1.99 -3.03 - -8.99 -2.72 -2.76 -0.43 1.56 3.37 2.8 -4.57 - -6.06 -4.52 -6.32 - -5.27 - - -9.37 - -2.35
AMTR_s00407p00014270 (evm_27.TU.AmTr_v1.0_scaffold00407.2)
- - - - -3.58 - -0.23 1.27 3.36 3.01 -1.98 - - -5.3 -5.92 - - - - - - -4.33
AMTR_s00530p00013930 (evm_27.TU.AmTr_v1.0_scaffold00530.1)
- - - - -0.38 - - - 3.99 1.99 - 0.32 - -3.08 -4.75 - - - - - - -
AMTR_s02390p00006900 (evm_27.TU.AmTr_v1.0_scaffold02390.1)
1.76 - 0.57 -6.24 -0.38 - -3.69 0.53 3.05 2.41 -6.46 -1.47 -1.83 -4.8 -1.24 - - -5.91 - -6.53 - -3.62
AMTR_s03759p00007350 (evm_27.TU.AmTr_v1.0_scaffold03759.1)
-2.56 - - - -5.01 - -0.81 1.96 3.5 2.59 - - -7.35 -4.81 - - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.