Heatmap: Cluster_94 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Ovary
Microspore
Generative cell
Pollen
Sperm cell
Pollen grain
Pollen tube
Pollen tube (1.5h)
Pollen tube (3h)
Pollen tube (9h)
Pistil
Style (before flowering)
Style (after flowering)
Style (pollinated, after flowering)
Flower (buds)
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Pericarp/Exocarp (4 DPA)
Pericarp
Pericarp (5 DPA)
Pericarp (7 DPA)
Pericarp (10 DPA)
Fruit (mature green)
Fruit (breaker stage)
Septum (7 DPA)
Septum (10 DPA)
Septum/Seed (4 DPA)
Seed (5 DPA)
Seed (7 DPA)
Seed (10 DPA)
Seeds (10 DPA)
Seeds (20 DPA)
Seeds (30 DPA)
Seeds (Pk-stem)
Seeds (Br-stem)
Seeds (Pk-equatorial)
Seeds (Pk-stylar)
Seeds (Br-stylar)
Seeds
Seeds (RR)
Seeds (LR)
Seeds (MG-equatorial)
Hypocotyl
Seedling (leaves)
Seedling (roots)
Callus
Meristem (vegetative)
Meristem
Apical meristem
Leaf
Root
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root hair cells
- - -16.26 1.2 - 3.86 - -1.59 -2.71 - - -3.89 - -2.12 - - 2.54 1.59 - - -2.3 1.84 - -2.75 -2.07 - - -2.6 -1.27 0.81 -2.2 1.53 2.43 -0.66 -1.11 -0.04 1.52 1.71 - -0.63 - 0.67 0.89 1.51 -3.71 -3.19 - - 0.34 - - - -5.57 - - - - -
- - -0.62 2.51 1.1 2.66 1.32 -0.92 -0.36 -1.32 -1.94 -0.6 -1.44 -0.19 0.18 0.68 2.55 0.78 - - 0.06 -1.89 -1.28 -0.79 0.03 - - 0.5 0.22 -1.27 0.1 1.19 1.8 - 0.63 -1.27 -0.36 -1.7 - -0.78 - -1.0 -0.18 2.18 -0.6 - -3.2 - -0.19 -2.71 - - -2.33 - -1.37 -0.26 -0.75 -
- - - 1.2 -0.67 - - -4.34 - - - - - -0.93 - - - -0.57 -0.02 - - -1.55 - -3.49 -0.77 -1.87 - -2.55 -0.1 -1.71 - 0.09 1.88 - 2.11 - 2.65 1.76 - 3.15 2.69 1.84 1.87 2.23 -0.11 -0.55 - - 0.08 - - -1.55 -0.21 - - - -1.57 -
- - -1.1 -0.3 1.87 - -0.35 - - - - - 0.25 - -1.16 -2.22 - -2.18 - 1.88 - - -1.11 -0.14 1.27 - -0.26 1.18 4.42 0.81 0.38 0.27 -1.03 - - - - - - - - - - - - - - 2.62 - - - - -0.34 2.73 - - - -
-4.34 -7.4 -2.53 -5.15 -6.81 - -7.4 - - - - - -4.44 -4.17 -6.15 -4.31 -0.96 0.9 -2.56 -5.2 -1.25 -6.67 -6.5 -2.62 -1.51 -1.0 0.17 -1.67 2.63 -1.37 -5.46 -2.95 -0.81 -3.35 0.59 1.63 -4.8 -3.49 -2.41 -5.31 - -1.92 -3.13 -3.11 0.21 -1.15 -6.69 3.55 3.6 -1.12 3.66 -3.0 -2.5 -1.53 -5.98 - - -4.65
-3.27 - -3.37 2.11 -0.46 2.92 -0.41 1.03 0.88 -3.03 -2.59 -2.3 -2.68 0.19 -1.5 -0.87 2.15 0.03 - - -0.77 1.27 -2.55 -1.19 -1.98 -2.59 - -0.35 -1.51 0.62 -0.15 2.78 2.74 -0.55 1.11 -1.93 0.21 -0.62 0.32 -0.96 0.99 -0.54 -2.1 - -4.21 - - - 0.25 - -4.1 - -4.61 - - - - -1.5
- - - - - - - - - - - - - - - -23.32 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 5.23 - - - 0.02 4.28 - - - -
- - - 1.37 - - 1.1 0.0 -2.59 - - - - 4.19 2.91 2.36 - - - - - - - - -1.18 - - - - - - - -1.19 - - - - - - - - -4.14 - - - - - 1.18 -0.95 - - - - 3.07 3.18 - - -
- - - 1.09 - - - 1.79 0.78 - - - - 4.13 3.46 1.62 - - - - - - - - - - - - - - - - -2.82 - - - - - - - - - - - - -1.51 - 1.28 0.58 - - - -6.05 3.48 1.58 -0.83 - -
- - - 1.1 - - - -0.38 0.54 - - - 0.25 4.66 3.24 1.23 1.12 -0.93 - - - 0.97 - -4.15 -3.14 - - - - - - - - - - -0.67 - -1.01 - - - -1.53 - - - - - -1.04 1.99 - - -0.85 0.48 0.36 -0.09 - - -1.46
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-2.79 -1.61 -1.91 1.87 3.71 - 1.46 -8.07 -7.38 - - - -1.3 2.91 -2.46 -3.24 1.9 -2.81 -1.8 -2.9 -1.8 - -0.72 -0.66 -1.91 - -5.98 -1.73 -2.9 -1.73 -1.15 -1.68 -0.77 - 0.34 0.08 -2.15 - - - - -3.57 - -2.04 -2.13 -0.5 -3.26 2.39 -0.88 -1.67 -4.22 -0.45 0.29 0.11 0.68 -1.61 2.41 0.03
- - - 0.12 -1.75 - - - - - - - -2.23 -3.96 - - -1.45 - - - -2.25 - - - -1.12 - -1.86 - -0.4 - -1.13 -1.05 1.21 - 3.8 0.17 2.45 1.86 1.92 2.1 0.33 1.77 1.4 3.18 0.28 - - - 0.17 - - - -3.95 - - - - -
- - - - - - - - - - - - - - - - - - - - 2.39 - - -1.12 -6.91 - 3.98 4.7 - 1.94 0.79 2.34 - - - - - - - - - - - - - - - - - - - - -25.99 - - - - -
- - - 2.21 3.2 - - - - - - - 1.65 - - - - - - - - - - - - - - 2.12 - - 0.1 - - - - 1.61 - - - - - - - - - - - - 4.93 - - - 1.12 - - - - -
- - - - - - - - - - - - - - - - 4.1 - - - - 3.85 - - - - - - - - - 0.58 - - - - - - - 3.71 - -0.22 - - - 1.83 - - 1.54 - - - 2.15 - - - - -
-0.97 - - 2.48 - - - -3.98 - - - - 1.04 0.47 - -1.1 0.24 -0.82 - -1.46 -1.35 - -1.19 -0.82 -0.33 - - -0.93 -1.81 0.45 -0.96 1.21 2.69 - 2.36 1.21 - 1.06 - 2.29 2.42 1.18 1.0 - - 0.13 - 0.2 1.73 - - -0.24 0.47 -1.43 - - - -
- - - - - - - - -2.51 - - - - 1.52 -0.68 1.3 0.76 - - - -0.26 -0.1 0.92 1.93 -1.23 - 2.79 0.52 0.94 - -0.4 0.19 0.52 - - - - - - 1.46 - -0.39 2.9 - - - -1.37 - 1.66 0.8 0.24 - -1.46 - 3.28 0.25 - -
-2.61 - -0.4 2.87 0.98 - -1.49 -5.21 -6.14 - - -5.91 -2.15 4.39 3.41 2.76 1.2 -2.08 -2.83 -4.43 -1.98 - -4.68 -2.38 -2.68 - - -1.56 -1.33 -0.92 -3.16 -1.1 -1.72 - 0.51 - - - - - - -4.31 - - - - - -2.16 -2.33 -2.55 -0.49 -3.38 -3.4 -4.33 - -2.6 -4.29 -
- - -0.01 -1.72 -0.74 - -1.39 - -4.43 - - - -2.3 - - -2.37 2.82 -0.91 - -1.56 - 4.09 -2.15 - - -1.11 - - -0.32 - -1.97 -2.44 -1.88 1.07 - - - - - - - -3.34 - - 0.31 2.49 - 2.05 1.08 - - - 0.28 3.53 - - - -
- - - 1.14 4.25 - 2.33 -0.54 - - - - - - - - - - - - - - - - - - - - 0.43 - - - 0.11 - - - - - - - - - - - - 3.11 - 2.5 3.3 - - - 0.77 1.45 - - - -
-7.62 -6.24 -5.47 -5.01 -5.99 - -6.56 -6.92 -7.74 -7.39 -7.36 -8.27 -6.23 -0.69 -2.64 -3.24 -0.21 -7.28 -7.79 -7.24 -2.14 -7.14 -1.77 -1.94 -1.82 -3.11 -2.86 -1.76 -2.02 -2.02 -1.59 -1.25 -0.92 -4.18 -0.11 -1.22 2.95 2.34 3.07 2.19 1.93 1.99 3.27 2.4 0.12 -0.93 -3.02 -2.33 -4.72 -2.83 -4.87 -7.3 -3.77 -4.99 -2.72 -2.52 -2.21 -9.16
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 2.0 - - - - - - 5.75 - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - 3.95 - - - - - - - - - - - - - - - - - 4.06 - - - - - - 4.62 - - - 0.41 - - - - -
- - - 1.7 - - - -2.31 -0.83 - - -0.88 - - 0.18 - 1.62 - 2.47 - - - - -1.21 -0.69 - - 0.31 0.74 - - - -0.67 - - 4.21 - - - 2.18 - 0.69 - - 2.73 - -0.67 - -0.07 0.08 - - 0.28 - - 1.12 0.9 -
- - 1.39 2.44 - - - - - - - - -1.06 - - -0.48 - 0.04 1.33 2.67 - 3.82 - - - -0.07 -1.06 - - - - - - - - - - - - - - - - - - - - 0.05 3.28 - - - 1.57 3.07 - - - 0.29
- - - -0.98 -1.02 - - 0.58 1.3 - -4.66 - -3.88 4.06 3.08 3.14 0.81 0.1 - - - - - - - - - - - - - - - - - - - - - - - -5.28 - 1.65 - 3.4 - - -1.67 - - - 0.88 -1.74 - - - -
-5.39 -5.41 -4.73 1.34 -0.71 -4.3 -5.41 0.71 1.81 -5.81 -4.96 -4.51 -3.56 3.97 2.89 2.85 2.38 0.8 - - - - - -8.07 -6.82 - - - - - -3.79 -5.36 -5.01 - - - - - - -4.12 - -4.86 - - - 3.0 - - -1.29 -6.36 - - 0.93 0.57 -3.37 -4.0 - -
-3.96 - -6.08 - - - - 2.6 1.39 - -5.89 - -7.23 3.71 2.49 2.31 - -6.64 - - - - -6.74 -6.72 - - - - -7.36 -6.42 -6.93 -4.65 -3.33 - -4.62 - -4.77 -4.1 - -5.32 - -5.75 - - - 4.46 - - -2.83 - - - 1.55 - - - -6.46 -
- - - -4.41 - - -3.15 2.63 1.62 - - -5.84 -5.26 4.08 3.07 2.72 -0.69 -5.4 - - - - - -3.31 -4.71 - - - -3.63 -3.62 - -3.73 -3.17 -1.55 -0.67 -2.08 - -3.47 - -2.73 - -5.86 - - - 3.59 - - -2.3 -4.05 - - 0.77 - - - - -
-6.47 -6.45 -5.91 0.57 -5.9 - - -2.8 -3.8 -9.03 -7.73 - -4.77 3.59 3.18 2.66 3.29 2.09 - - -5.8 -6.79 -6.89 -6.39 -7.42 - -7.12 -6.46 -6.32 -5.42 -4.39 -3.69 -5.29 -4.06 - -5.63 -5.9 -5.4 - -6.51 -4.86 -6.39 -4.18 -4.82 - 3.5 - -4.9 -4.58 -3.78 -4.49 -6.21 1.18 -7.69 -6.11 -7.43 -1.91 -3.37
- - - - 1.22 - - -0.74 - - - - -0.5 4.32 3.7 3.07 - -1.66 - - - - - - - - -1.32 - - - - -2.1 - - - - - 0.24 - - - -1.46 - - - - - - 2.29 - - - -1.12 2.09 - -0.35 - -
- - - 1.43 2.41 1.24 - -1.38 -1.11 -1.68 -1.77 - 2.77 0.09 0.33 1.22 - 2.72 4.19 - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.61 1.68 - - - -0.92 1.62 - - - -
-2.55 - 0.23 2.25 1.69 - -2.85 -4.82 -5.49 - - - 0.72 -1.43 - -2.98 3.71 -0.43 -0.99 0.58 -0.46 -1.99 -1.18 -0.21 -1.83 -2.64 -3.24 -0.49 -1.06 -0.39 -0.55 -1.62 -0.79 - -1.2 - -1.1 -0.17 - - -1.06 -1.31 -1.06 -1.02 - 2.21 -2.69 1.42 0.24 -0.62 0.95 1.64 1.69 -0.29 -1.3 -2.63 -2.75 0.49
-2.35 -1.78 -1.34 -2.35 - - - - - - - - -0.6 -0.11 1.74 0.09 1.42 1.61 -0.13 0.73 0.5 - 0.14 0.73 -0.83 -3.6 -5.9 1.12 -0.5 1.36 2.48 1.66 1.22 - 1.53 -3.1 - - - - - -5.99 - - - 2.54 0.1 1.4 -0.09 0.16 -2.8 -2.15 0.48 0.62 1.28 -1.35 -3.45 -1.18
- - - - - - - - - - - - - - - - - - - - - - - 5.86 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
1.93 0.92 0.89 -0.51 -4.76 -24.1 -5.13 -8.28 -9.83 - - - -1.1 3.33 0.82 0.19 1.78 -2.18 -0.81 -0.44 -3.01 -1.98 -0.49 -1.79 -2.55 -6.83 -3.86 -2.81 -5.0 -3.19 -1.69 -1.93 -1.69 -5.38 -3.01 -2.39 - - - -5.9 -4.86 -6.01 -20.45 - -4.47 -0.57 -4.83 1.45 0.78 -5.99 -2.09 -3.07 -1.61 1.63 3.24 2.04 0.95 1.85
-2.55 -2.79 0.3 -1.45 - 3.23 -2.85 -3.1 -2.2 - -1.66 - -4.1 -6.23 - -3.98 2.47 0.0 - - -3.3 0.84 - -1.96 -4.4 - - -2.92 -0.86 0.0 - -0.58 -1.37 0.28 2.13 -0.48 2.21 1.35 1.4 1.2 2.72 1.29 2.42 - 0.29 - - - -2.64 - - - -6.39 -3.18 - - - -
-0.2 - - - - - - - - - - - - - - - 3.86 - - - - 4.94 - - - - - - - - - - - - 1.23 0.82 - - - - - -2.7 1.6 - - - - - -0.15 - - - 1.86 - - - - -
- - - - - - - - - - - 2.46 2.7 - - - - - - - - - - - - - - - - - - - - - 5.46 - - - - - - - - - - - - - - - - - 0.92 - - - - -
- - - - - 0.57 - - -2.3 - - - 0.5 -0.72 - -1.98 3.14 - - - -0.52 1.13 - -0.72 - - - - - 0.31 0.31 2.46 2.46 2.86 2.12 - - 1.93 - - - -2.71 - - - - - 0.93 2.89 - - 0.09 1.22 - - - - -
- - - - - - -2.49 -3.9 -2.76 - - - -3.4 - - - -0.0 -4.15 - - -0.05 1.5 - -1.92 0.14 -2.75 - 0.18 0.39 1.66 0.44 1.38 1.95 3.14 3.6 -0.1 -0.87 -0.26 2.17 0.12 1.17 -0.04 0.8 0.21 0.8 - - - -1.0 -3.32 - -2.43 -2.28 - - - - -
- - - - 3.96 - 3.43 - - - -0.56 - - - - - - - - - - - - - - - - - - - - -0.66 0.35 4.3 - - - - - - - - - - - 2.27 - - 1.68 - - - 0.51 - - - - -
- - - - - 2.93 0.28 - -1.77 - -2.79 - - - - - -5.64 0.78 - - -1.69 - - -2.96 - 1.2 -0.62 - 0.47 - 1.18 1.52 0.58 - 1.3 - 0.54 - 1.71 - - 0.17 4.05 2.47 2.06 - - - -0.14 - - - -3.41 - - - - -
0.68 0.39 -0.28 -3.46 -3.33 -9.69 -6.16 -8.28 -9.04 -9.48 -9.3 -11.18 -1.69 3.45 2.26 1.58 -0.27 -1.64 0.9 0.46 -0.5 -2.65 -0.22 -0.61 -1.14 -1.22 -2.37 -0.13 -0.27 -0.49 0.11 -0.44 -0.8 -1.49 -1.55 -3.74 -2.59 -3.12 -3.37 -2.89 -3.73 -3.28 -2.49 -2.65 -3.96 0.76 -1.73 2.48 -0.29 0.26 0.85 -0.66 -0.05 1.3 -0.53 0.04 0.65 0.77
-1.39 -3.24 1.28 -2.88 -6.99 - -4.16 - -11.9 - - - 1.97 -2.78 -3.56 -2.8 -0.96 -1.75 -1.8 -2.71 0.17 -1.78 0.73 0.64 0.99 2.96 2.5 0.49 -1.41 -1.61 -0.37 -0.05 -0.29 3.52 -0.6 -3.7 -2.92 -3.09 -2.84 -3.45 -3.38 -3.5 -2.19 -2.92 -6.5 -1.5 -3.48 -0.34 -0.49 -0.77 -1.39 -1.64 -2.17 -0.51 -1.47 1.32 1.24 1.02
- - - - - - - - - - - - 3.42 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 5.56 - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 5.86 - - - - - - - - - -
-2.42 -2.09 -4.95 1.67 -0.79 -2.26 -2.18 -1.31 -1.49 -3.43 -3.01 -2.91 -3.19 -1.79 -2.77 -2.17 -1.35 -4.48 - -0.83 0.19 - -1.06 0.01 0.48 -1.63 -4.18 0.2 -0.0 -1.46 1.03 1.43 1.99 -2.02 1.8 -1.4 -0.3 -1.44 -0.5 -0.41 -0.82 -1.28 0.3 -1.78 -1.88 1.27 - -0.32 -2.57 -0.27 1.3 - -1.36 -3.97 1.7 2.42 3.17 -0.78
- - - 3.87 - - - - -0.5 1.02 -0.84 - 2.88 2.89 3.04 3.99 - - - - - - - - - - - - - - - - - - - - - - - - - -0.22 - - - - - - - - - - -1.86 - - - - -
- - -2.98 -1.65 - - - - - - - - -3.23 - - - 3.33 -2.33 - - - - - - - - -3.21 - - - - - - - - -0.44 2.97 3.6 1.34 1.89 1.92 2.09 2.77 1.96 0.28 - - - -2.42 - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 5.86 - - - - -
-0.7 -0.49 0.59 - 0.02 0.56 - 0.79 1.87 3.0 2.49 2.38 -1.8 - - - - 2.03 1.59 - -1.48 2.04 - -0.31 -1.15 0.09 -1.79 - 0.32 - 0.88 -0.24 1.06 - - - - - - - - -3.18 - - - -1.14 - - 2.26 - - - -0.76 0.39 - - -0.51 -
-2.91 -1.83 1.31 1.41 -0.75 -1.27 -2.07 -0.1 -0.5 -0.55 -0.49 -0.51 -0.65 3.13 2.88 1.86 -1.48 -2.44 - - -0.13 0.39 -2.43 -1.81 -1.03 -4.3 -5.18 -0.93 0.38 -1.16 -2.38 -1.27 -1.15 - 0.4 -1.05 -0.04 -3.62 - -2.66 -1.28 -1.15 -0.21 -1.24 -0.72 0.1 -1.3 0.21 0.83 -1.76 -2.63 0.72 -1.08 1.08 1.12 1.07 -0.52 -2.84
-1.9 -1.76 -2.4 0.43 -1.08 - - -2.78 -3.94 -1.91 -2.73 - -2.54 -1.65 -1.31 -2.4 3.26 2.91 -0.5 1.05 -1.75 0.09 -3.36 -1.52 -5.17 -1.32 1.04 -1.21 -2.28 - - -2.59 -4.76 - 0.27 - - - - - - -4.42 - - - 2.14 0.14 -1.13 3.41 -3.58 -3.24 0.89 2.2 -0.84 -0.3 1.43 -2.63 -
- - 2.71 -2.34 - - - -0.39 -0.91 -3.7 - - - 2.3 2.44 2.32 - 1.61 - - - 4.66 - - - - - - - - - -2.92 -4.02 - - - - - - - - - - - - - - -3.15 -0.53 -1.47 - - 2.26 - - - - -
- - - - - - - - - - - - - 3.07 5.04 2.38 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 3.53 - - - - -
0.82 -0.63 0.4 0.07 -0.2 - -4.4 - - - - - 0.16 -0.83 0.08 -0.24 1.93 -0.39 0.09 0.06 0.58 -0.03 -1.9 0.08 -0.36 0.36 -0.45 0.83 1.73 0.87 -0.94 -0.5 -0.42 - 0.25 -0.46 -0.82 -1.23 -1.74 -1.8 -2.87 -1.24 -0.7 0.3 -0.23 2.9 -3.43 0.53 0.04 -2.07 -0.0 0.26 1.2 0.27 -2.0 -2.73 -2.11 1.67
- - 1.63 - - - - - - - - - - - - - 4.83 -1.88 - - - 4.64 - - - - - - - - - - - - - - - - - - - - - - - - - - 0.02 - - - -3.43 - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.