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Heatmap: Cluster_82 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00001p00262520 (evm_27.TU.AmTr_v1.0_scaffold00001.386)
 13.99 0.0 0.0 0.0 0.53 0.0 0.15 0.0 0.26 0.23 0.0 0.0 0.21 0.08 0.02 0.46 0.0 0.0 0.0 0.0 0.0 0.05
AMTR_s00003p00085870 (evm_27.TU.AmTr_v1.0_scaffold00003.51)
 71.01 0.0 0.0 0.0 1.17 0.0 0.14 0.0 0.05 0.05 0.0 0.0 0.14 0.0 0.26 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00006p00257830 (evm_27.TU.AmTr_v1.0_scaffold00006.202)
 59.09 0.0 0.0 0.94 0.28 0.0 0.01 0.02 5.12 1.07 0.1 0.0 0.67 0.01 0.05 0.0 1.42 0.1 0.0 0.0 0.0 0.0
AMTR_s00008p00189260 (evm_27.TU.AmTr_v1.0_scaffold00008.111)
 29.11 0.0 0.0 0.0 0.12 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.07
AMTR_s00012p00069550 (evm_27.TU.AmTr_v1.0_scaffold00012.27)
 13.94 0.23 0.06 0.0 0.56 0.0 0.03 0.0 0.02 0.0 0.0 0.0 0.3 0.06 0.13 0.32 0.12 0.42 0.4 0.2 0.0 0.13
AMTR_s00014p00024900 (evm_27.TU.AmTr_v1.0_scaffold00014.7)
 16.17 0.0 0.0 0.0 2.73 0.0 0.05 0.0 0.0 0.0 0.0 0.0 0.14 0.0 0.12 0.0 0.0 0.0 0.0 0.2 2.11 0.07
AMTR_s00016p00044380 (evm_27.TU.AmTr_v1.0_scaffold00016.15)
 17.93 0.0 0.0 0.0 3.21 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.23 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.29
AMTR_s00017p00018990 (evm_27.TU.AmTr_v1.0_scaffold00017.6)
 14.36 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00021p00121740 (evm_27.TU.AmTr_v1.0_scaffold00021.69)
 11.01 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.14 0.0 0.03 0.0 0.0 0.0 0.0 0.0 0.0 0.06
AMTR_s00024p00230480 (evm_27.TU.AmTr_v1.0_scaffold00024.241)
 11.06 0.0 0.0 0.13 0.2 0.0 0.1 0.0 0.03 0.18 0.0 0.0 0.0 0.04 0.03 0.0 0.27 0.0 0.0 0.0 0.0 0.04
AMTR_s00025p00244880 (evm_27.TU.AmTr_v1.0_scaffold00025.385)
 11.63 0.0 0.0 0.18 0.2 0.0 0.05 0.0 0.06 0.11 0.0 0.0 0.15 0.03 0.06 0.0 0.0 0.0 0.0 0.03 0.0 0.0
AMTR_s00046p00092170 (evm_27.TU.AmTr_v1.0_scaffold00046.48)
 8.67 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02 0.0 0.0 0.0 0.03 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.48 0.0
AMTR_s00047p00226070 (evm_27.TU.AmTr_v1.0_scaffold00047.184)
 15.87 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.13 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00051p00212940 (evm_27.TU.AmTr_v1.0_scaffold00051.94)
 7.0 0.0 0.0 0.0 0.4 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.88 0.0
AMTR_s00052p00157930 (evm_27.TU.AmTr_v1.0_scaffold00052.65)
 40.68 0.0 0.0 0.0 1.46 0.97 2.86 0.0 0.19 0.48 0.47 0.0 0.52 0.93 0.07 0.0 1.91 0.0 0.63 1.02 12.61 1.09
AMTR_s00053p00193230 (evm_27.TU.AmTr_v1.0_scaffold00053.145)
 4.62 0.0 0.0 0.0 0.0 0.0 0.07 0.0 0.0 0.01 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00057p00162890 (evm_27.TU.AmTr_v1.0_scaffold00057.153)
 29.65 0.0 0.0 0.04 0.0 0.0 0.01 0.0 0.0 0.01 0.03 0.0 0.31 0.0 0.02 0.0 0.0 0.0 0.05 0.0 0.0 0.0
AMTR_s00057p00163340 (evm_27.TU.AmTr_v1.0_scaffold00057.154)
 16.99 0.0 0.0 0.0 0.17 0.0 0.0 0.0 0.8 0.13 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02 0.0 0.0
AMTR_s00057p00164580 (evm_27.TU.AmTr_v1.0_scaffold00057.161)
 10.43 0.0 0.0 0.0 0.07 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.17 0.0 0.04 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00058p00067670 (evm_27.TU.AmTr_v1.0_scaffold00058.30)
 9.68 0.0 0.0 0.0 0.23 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00067p00126450 (evm_27.TU.AmTr_v1.0_scaffold00067.107)
 588.45 7.14 51.03 0.0 1.24 0.0 0.0 0.0 0.05 0.08 0.0 0.0 7.11 0.0 0.3 0.0 3.37 0.0 0.0 1.47 0.0 2.68
AMTR_s00067p00154960 (evm_27.TU.AmTr_v1.0_scaffold00067.151)
 10.26 0.0 0.0 0.0 0.03 0.0 0.0 0.0 0.0 0.0 0.0 0.52 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.07
AMTR_s00071p00030270 (evm_27.TU.AmTr_v1.0_scaffold00071.14)
 6.51 0.0 0.0 0.04 0.31 0.0 0.12 0.0 0.45 0.27 0.89 0.0 0.49 0.6 0.49 0.21 0.03 0.82 0.26 0.41 2.05 0.11
AMTR_s00078p00153600 (evm_27.TU.AmTr_v1.0_scaffold00078.131)
 24.58 0.0 0.0 0.0 0.46 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.36 0.06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00080p00066750 (evm_27.TU.AmTr_v1.0_scaffold00080.21)
 26.67 0.0 0.0 0.0 0.44 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.25 0.11 0.2 0.0 0.0 0.0 0.0 0.0 0.8 0.51
AMTR_s00086p00056140 (evm_27.TU.AmTr_v1.0_scaffold00086.22)
 27.65 0.66 0.0 0.02 0.27 0.0 0.0 0.0 0.03 0.05 0.22 0.19 0.17 0.07 0.06 0.0 0.27 0.17 0.12 0.09 2.67 0.1
AMTR_s00095p00149910 (evm_27.TU.AmTr_v1.0_scaffold00095.120)
 9.04 0.0 0.0 0.0 0.05 0.0 0.01 0.0 0.0 0.0 0.0 0.0 0.26 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00095p00154910 (evm_27.TU.AmTr_v1.0_scaffold00095.131)
 7.59 0.0 0.0 0.0 0.09 0.0 0.01 0.0 0.01 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00095p00166460 (evm_27.TU.AmTr_v1.0_scaffold00095.145)
 5.49 0.0 0.0 0.0 0.04 0.0 0.0 0.0 0.01 0.02 0.0 0.0 0.01 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00109p00112000 (evm_27.TU.AmTr_v1.0_scaffold00109.109)
 6.38 0.0 0.0 0.0 0.11 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02 0.0 0.11 0.0 0.0 0.0 0.0 0.0 0.0 0.02
AMTR_s00110p00020470 (evm_27.TU.AmTr_v1.0_scaffold00110.2)
 439.65 17.96 21.57 0.08 0.03 0.31 0.01 0.0 0.26 0.04 6.75 0.0 3.39 0.0 0.01 0.0 0.0 0.0 0.0 0.02 0.0 5.77
AMTR_s00113p00028160 (evm_27.TU.AmTr_v1.0_scaffold00113.8)
 0.9 0.0 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00116p00144040 (evm_27.TU.AmTr_v1.0_scaffold00116.48)
 74.05 0.0 0.0 0.0 0.18 0.0 0.03 0.04 1.21 1.47 0.0 0.0 0.26 0.04 0.01 0.15 0.0 0.0 0.0 0.03 0.0 0.0
AMTR_s00116p00144700 (evm_27.TU.AmTr_v1.0_scaffold00116.49)
 69.04 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.19 0.81 0.0 0.0 0.04 0.05 0.03 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00125p00113140 (evm_27.TU.AmTr_v1.0_scaffold00125.28)
 4.18 0.0 0.0 0.0 0.08 0.0 0.0 0.0 0.0 0.0 0.03 0.0 0.0 0.01 0.02 0.0 0.04 0.05 0.14 0.0 0.0 0.05
AMTR_s00143p00108540 (evm_27.TU.AmTr_v1.0_scaffold00143.31)
 14.04 0.0 0.0 0.0 1.19 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.17 0.0 0.03 0.0 0.0 0.0 0.0 0.0 2.65 0.0
AMTR_s00163p00017620 (evm_27.TU.AmTr_v1.0_scaffold00163.4)
 6.99 0.0 0.0 0.0 0.98 0.0 0.0 0.0 0.02 0.02 0.0 0.0 0.73 0.19 0.08 0.37 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00168p00051810 (evm_27.TU.AmTr_v1.0_scaffold00168.17)
 14.03 0.0 0.0 0.0 0.4 0.0 0.13 0.0 0.14 0.1 0.38 0.0 0.08 0.11 0.12 0.0 0.29 0.37 0.19 0.48 5.69 0.16
AMTR_s00168p00074090 (evm_27.TU.AmTr_v1.0_scaffold00168.31)
 5.37 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00226p00018460 (evm_27.TU.AmTr_v1.0_scaffold00226.6)
 75.94 0.0 1.41 0.0 0.04 0.0 0.0 0.0 1.1 0.13 0.0 0.0 0.46 0.01 0.0 1.85 0.0 0.0 0.0 0.0 0.0 0.03
AMTR_s00329p00004550 (evm_27.TU.AmTr_v1.0_scaffold00329.1)
 11.38 0.0 0.0 0.0 0.2 0.0 0.0 0.0 0.0 0.07 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00391p00004640 (evm_27.TU.AmTr_v1.0_scaffold00391.1)
 1.48 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00667p00011980 (evm_27.TU.AmTr_v1.0_scaffold00667.1)
 9.94 0.0 0.0 0.01 0.39 0.0 0.01 0.0 0.02 0.02 0.0 0.33 0.03 0.24 0.23 0.08 0.0 0.1 0.0 0.04 0.0 0.01
AMTR_s01333p00002250 (evm_27.TU.AmTr_v1.0_scaffold01333.1)
 24.78 0.0 0.13 0.03 0.12 0.0 0.05 0.0 0.18 0.1 0.04 0.25 0.02 0.0 0.0 0.09 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s01518p00000610 (evm_27.TU.AmTr_v1.0_scaffold01518.1)
 21.02 0.0 0.0 0.0 0.08 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s02363p00003720 (evm_27.TU.AmTr_v1.0_scaffold02363.1)
 12.3 0.0 0.0 0.0 0.19 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.13

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)