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Heatmap: Cluster_111 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00002p00257930 (evm_27.TU.AmTr_v1.0_scaffold00002.419)
 7.5 38.99 0.0 0.0 0.05 0.0 0.01 0.0 0.01 0.01 0.08 0.07 0.09 0.0 0.05 0.05 0.0 2.22 2.35 2.93 4.53 1.24
AMTR_s00017p00203180 (evm_27.TU.AmTr_v1.0_scaffold00017.121)
 0.06 34.55 0.0 0.0 0.22 0.0 0.0 0.0 0.04 0.1 1.0 0.52 0.11 0.0 0.08 0.0 1.47 0.45 0.23 0.0 0.0 2.55
AMTR_s00019p00219950 (evm_27.TU.AmTr_v1.0_scaffold00019.275)
 0.0 52.98 0.0 0.29 2.89 1.84 0.17 0.0 0.46 0.35 6.77 7.26 5.14 2.96 1.72 5.13 6.94 4.48 3.75 2.57 2.07 4.95
AMTR_s00019p00224890 (evm_27.TU.AmTr_v1.0_scaffold00019.291)
 0.0 16.6 0.0 0.13 0.39 0.0 0.02 0.0 0.05 0.0 0.0 0.0 0.49 0.17 0.06 0.0 1.71 0.64 0.0 0.04 0.0 0.3
AMTR_s00021p00252540 (evm_27.TU.AmTr_v1.0_scaffold00021.293)
 0.0 1.61 0.0 0.0 0.0 0.0 0.0 0.0 0.36 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00024p00212400 (evm_27.TU.AmTr_v1.0_scaffold00024.194)
 0.0 19.37 0.0 0.09 0.93 0.0 0.0 0.0 0.0 0.0 0.0 0.0 2.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00025p00169210 (evm_27.TU.AmTr_v1.0_scaffold00025.200)
 0.0 28.44 0.0 0.0 0.47 0.0 0.0 0.21 0.0 0.0 3.33 0.0 7.91 0.0 0.17 0.0 0.0 0.0 0.0 0.13 0.0 0.57
AMTR_s00030p00121840 (evm_27.TU.AmTr_v1.0_scaffold00030.70)
 0.0 50.27 0.0 2.67 2.76 0.0 0.92 0.0 4.74 4.31 4.93 0.0 10.68 5.32 1.97 3.5 2.92 0.0 2.03 10.89 0.58 6.26
AMTR_s00031p00195840 (evm_27.TU.AmTr_v1.0_scaffold00031.94)
 0.0 11.8 0.04 0.0 0.13 0.0 0.01 0.0 0.0 0.01 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00035p00164780 (evm_27.TU.AmTr_v1.0_scaffold00035.30)
 18.47 195.38 16.19 0.0 6.4 0.0 0.0 0.0 0.03 0.04 0.26 0.0 0.08 0.12 0.02 0.0 0.0 0.0 0.0 0.09 0.0 0.0
AMTR_s00038p00175990 (evm_27.TU.AmTr_v1.0_scaffold00038.118)
 0.0 22.53 0.0 0.0 0.31 0.83 0.0 0.0 0.03 0.0 0.0 0.0 0.24 0.03 0.03 0.0 0.0 0.0 0.0 0.18 0.91 0.07
AMTR_s00038p00230020 (evm_27.TU.AmTr_v1.0_scaffold00038.224)
 0.0 16.95 0.0 0.0 0.06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.04 0.0 0.17 0.0 0.0 0.0 0.0 0.17 0.0 0.0
AMTR_s00044p00125900 (evm_27.TU.AmTr_v1.0_scaffold00044.109)
 0.0 2.41 0.0 0.0 0.01 0.0 0.54 0.15 0.51 0.33 0.0 0.09 0.02 0.16 0.0 0.0 0.23 0.0 0.07 0.0 0.0 0.02
AMTR_s00047p00094850 (evm_27.TU.AmTr_v1.0_scaffold00047.37)
 0.0 1.68 0.0 0.0 0.29 0.0 0.31 0.08 0.17 0.34 0.0 0.0 0.0 0.07 0.05 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00047p00179600 (evm_27.TU.AmTr_v1.0_scaffold00047.102)
 0.0 3.57 0.0 0.0 0.04 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00049p00076080 (evm_27.TU.AmTr_v1.0_scaffold00049.48)
 0.0 2.77 0.0 0.0 0.23 0.0 0.0 0.0 0.0 0.0 0.0 0.66 0.03 0.01 0.05 0.56 0.04 0.0 0.0 0.02 0.0 0.04
AMTR_s00049p00211790 (evm_27.TU.AmTr_v1.0_scaffold00049.239)
 0.0 29.17 0.0 0.3 4.05 0.0 0.0 0.0 0.24 0.0 0.78 0.0 0.23 0.29 0.38 1.76 0.0 0.0 1.16 0.0 2.04 0.32
AMTR_s00050p00182320 (evm_27.TU.AmTr_v1.0_scaffold00050.42)
 0.0 11.92 0.0 0.0 1.06 0.0 0.2 0.0 0.1 0.15 0.94 0.64 0.56 0.22 0.61 0.64 1.95 0.83 1.34 0.61 3.99 0.57
AMTR_s00053p00154830 (evm_27.TU.AmTr_v1.0_scaffold00053.102)
 0.0 10.49 0.0 0.0 1.13 0.76 0.0 0.0 0.01 0.0 0.11 0.0 0.11 0.04 0.19 0.0 0.0 0.0 0.0 0.05 0.0 0.16
AMTR_s00059p00075680 (evm_27.TU.AmTr_v1.0_scaffold00059.50)
 0.0 8.42 0.0 0.0 0.22 0.0 0.11 0.0 0.11 0.13 1.39 0.0 1.1 0.02 0.03 0.0 0.05 0.0 0.0 0.0 0.0 0.01
AMTR_s00059p00136970 (evm_27.TU.AmTr_v1.0_scaffold00059.118)
 0.0 26.43 0.0 0.0 2.41 0.0 0.24 0.0 0.0 0.08 1.39 9.53 1.86 1.15 1.15 3.22 2.16 0.0 0.0 1.46 0.0 0.26
AMTR_s00060p00171810 (evm_27.TU.AmTr_v1.0_scaffold00060.108)
 0.0 12.51 0.0 0.0 0.83 0.0 0.2 0.0 0.05 0.01 0.29 0.99 0.18 0.08 0.24 0.0 1.03 0.44 1.25 0.34 2.54 0.27
AMTR_s00060p00171860 (evm_27.TU.AmTr_v1.0_scaffold00060.109)
 0.0 16.1 0.0 0.0 0.82 0.0 0.25 0.0 0.04 0.09 0.53 0.46 0.26 0.11 0.44 0.62 0.87 0.4 0.59 0.47 0.36 0.4
AMTR_s00060p00217030 (evm_27.TU.AmTr_v1.0_scaffold00060.171)
 0.0 3.11 0.0 0.0 0.32 0.0 0.04 0.0 0.02 0.01 0.0 0.0 0.09 0.02 0.11 0.0 0.0 0.0 0.0 0.08 0.4 0.03
AMTR_s00061p00070770 (evm_27.TU.AmTr_v1.0_scaffold00061.46)
 0.25 20.68 0.67 0.5 1.26 0.0 0.0 0.0 0.03 0.03 1.83 1.81 0.93 1.05 1.49 0.06 0.71 0.08 0.0 0.8 0.43 0.06
AMTR_s00063p00152970 (evm_27.TU.AmTr_v1.0_scaffold00063.44)
 0.0 5.92 0.0 0.0 0.09 0.0 0.0 0.0 0.03 0.0 0.0 0.0 0.0 0.0 0.24 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00065p00161710 (evm_27.TU.AmTr_v1.0_scaffold00065.120)
 0.0 44.03 2.62 0.97 1.86 0.38 0.21 0.0 0.43 0.33 0.26 0.0 0.68 0.29 0.58 0.0 0.24 0.0 0.0 1.19 0.74 0.23
AMTR_s00074p00160100 (evm_27.TU.AmTr_v1.0_scaffold00074.74)
 0.25 11.54 0.02 0.0 0.99 0.0 0.34 0.0 0.68 0.45 1.58 2.16 0.59 0.46 0.39 0.13 1.65 0.0 0.15 0.11 0.14 0.93
AMTR_s00074p00199470 (evm_27.TU.AmTr_v1.0_scaffold00074.127)
 0.0 13.4 0.0 0.0 0.09 0.0 0.06 0.08 0.11 0.02 1.44 1.02 0.88 0.28 0.09 1.73 0.97 0.54 1.05 0.73 0.0 1.23
AMTR_s00077p00088270 (evm_27.TU.AmTr_v1.0_scaffold00077.72)
 0.0 26.98 0.0 0.0 0.57 0.0 0.03 0.0 0.0 0.04 0.54 0.0 0.97 0.45 0.29 0.62 0.0 0.0 0.0 0.05 0.0 3.21
AMTR_s00079p00083420 (evm_27.TU.AmTr_v1.0_scaffold00079.27)
 0.0 33.88 0.0 0.0 0.37 0.0 0.0 0.0 0.06 0.09 0.88 0.0 0.12 1.6 0.03 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00079p00083460 (evm_27.TU.AmTr_v1.0_scaffold00079.28)
 0.0 53.81 6.05 0.0 1.17 0.33 0.0 0.0 0.02 0.14 0.55 0.93 0.11 1.12 0.16 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00087p00060880 (evm_27.TU.AmTr_v1.0_scaffold00087.13)
 0.0 10.91 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00087p00060950 (evm_27.TU.AmTr_v1.0_scaffold00087.14)
 0.1 19.71 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00087p00061020 (evm_27.TU.AmTr_v1.0_scaffold00087.15)
 0.0 16.38 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00088p00145250 (evm_27.TU.AmTr_v1.0_scaffold00088.110)
 0.0 5.6 0.0 0.0 0.03 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.15 0.06 0.0 0.18 0.0 0.0 0.21 0.0 0.21 0.83
AMTR_s00099p00110810 (evm_27.TU.AmTr_v1.0_scaffold00099.93)
 0.0 5.43 0.66 0.0 0.18 0.0 0.0 0.0 0.0 0.01 1.15 0.25 0.18 0.01 0.36 0.68 0.0 0.0 0.0 0.0 0.0 0.02
AMTR_s00102p00102440 (evm_27.TU.AmTr_v1.0_scaffold00102.53)
 0.0 12.11 0.0 0.0 0.18 0.0 0.05 0.0 0.03 0.0 0.0 0.0 0.0 0.0 0.1 0.0 0.0 0.0 0.0 0.0 0.0 0.05
AMTR_s00113p00116210 (evm_27.TU.AmTr_v1.0_scaffold00113.24)
 0.0 14.33 0.0 0.0 0.38 0.0 0.03 0.0 1.27 0.85 0.0 0.0 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.05
AMTR_s00122p00121750 (evm_27.TU.AmTr_v1.0_scaffold00122.60)
 0.0 0.1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00130p00034380 (evm_27.TU.AmTr_v1.0_scaffold00130.10)
 0.0 9.03 0.0 0.0 0.91 0.0 0.0 0.0 0.48 0.04 0.82 0.0 0.42 0.05 0.03 0.0 0.0 1.22 0.0 0.18 0.0 0.0
AMTR_s00148p00049800 (evm_27.TU.AmTr_v1.0_scaffold00148.26)
 0.0 11.9 0.04 0.0 0.04 0.0 0.0 0.0 0.06 0.09 0.09 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02 0.0 0.0
AMTR_s00152p00093450 (evm_27.TU.AmTr_v1.0_scaffold00152.35)
 0.13 53.87 0.0 0.0 0.03 0.28 0.0 0.0 0.0 0.0 0.08 0.0 0.23 0.06 0.09 0.0 4.76 3.31 2.83 2.47 1.7 0.02
AMTR_s00157p00030180 (evm_27.TU.AmTr_v1.0_scaffold00157.6)
 0.0 17.39 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.04 0.09 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.34
AMTR_s00203p00031730 (evm_27.TU.AmTr_v1.0_scaffold00203.10)
 0.0 9.52 0.0 0.0 0.23 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 2.09
AMTR_s00224p00009210 (evm_27.TU.AmTr_v1.0_scaffold00224.2)
 0.0 9.74 0.0 0.19 0.08 0.0 0.12 0.0 0.16 0.12 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.36 0.0
AMTR_s00243p00012700 (evm_27.TU.AmTr_v1.0_scaffold00243.2)
 0.0 0.04 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00486p00010130 (evm_27.TU.AmTr_v1.0_scaffold00486.1)
 0.0 18.23 0.0 0.53 0.45 0.99 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.03 0.14 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s02676p00000730 (evm_27.TU.AmTr_v1.0_scaffold02676.1)
 0.0 8.22 0.0 0.16 0.04 0.0 0.0 0.0 0.01 0.0 0.21 0.57 0.67 0.3 0.43 0.0 0.0 0.0 0.0 0.31 2.5 0.45
AMTR_s02681p00002840 (evm_27.TU.AmTr_v1.0_scaffold02681.1)
 0.0 13.4 0.0 0.26 0.57 0.0 0.27 0.0 0.4 0.0 2.07 1.84 0.54 0.45 0.29 0.0 0.38 0.66 0.67 0.45 2.88 0.13

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)