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Heatmap: Cluster_170 (HCCA)

View as: (view raw or zlog-transformed)

View using InCHLib : here ( Experimental feature, still under development)

(Values are normalized against highest expression of the row)

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Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00001p00217560 (evm_27.TU.AmTr_v1.0_scaffold00001.225)
 0.0 0.07 0.01 0.01 0.54 0.0 0.0 0.0 0.0 0.0 0.52 1.0 0.22 0.31 0.35 0.09 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00001p00221310 (evm_27.TU.AmTr_v1.0_scaffold00001.230)
 0.13 0.12 0.07 0.09 1.0 0.42 0.27 0.23 0.23 0.23 0.09 0.1 0.14 0.34 0.5 0.11 0.04 0.05 0.06 0.05 0.03 0.08
AMTR_s00003p00083310 (evm_27.TU.AmTr_v1.0_scaffold00003.49)
 0.01 0.01 0.01 0.3 0.08 0.03 0.01 0.0 0.0 0.0 0.53 0.56 0.89 0.8 1.0 0.01 0.05 0.11 0.12 0.01 0.0 0.0
AMTR_s00003p00266880 (evm_27.TU.AmTr_v1.0_scaffold00003.382)
 0.32 0.1 0.08 0.09 0.35 0.0 0.07 0.14 0.11 0.11 0.79 1.0 0.39 0.47 0.26 0.41 0.34 0.38 0.57 0.13 0.26 0.25
AMTR_s00005p00264920 (evm_27.TU.AmTr_v1.0_scaffold00005.220)
 0.16 0.07 0.16 0.03 0.16 0.0 0.07 0.01 0.13 0.06 0.65 1.0 0.18 0.11 0.15 0.14 0.1 0.18 0.29 0.12 0.21 0.08
AMTR_s00011p00192370 (evm_27.TU.AmTr_v1.0_scaffold00011.58)
 0.23 0.12 0.22 0.09 0.36 0.0 0.02 0.01 0.02 0.03 0.8 1.0 0.36 0.52 0.22 0.15 0.34 0.29 0.29 0.11 0.22 0.29
AMTR_s00011p00262370 (evm_27.TU.AmTr_v1.0_scaffold00011.198)
 0.15 0.16 0.04 0.38 0.17 0.02 0.0 0.0 0.0 0.0 0.17 1.0 0.27 0.29 0.18 0.1 0.22 0.16 0.17 0.09 0.05 0.0
AMTR_s00014p00234820 (evm_27.TU.AmTr_v1.0_scaffold00014.97)
 0.0 0.0 0.0 0.0 0.91 0.0 0.25 0.0 0.14 0.15 0.1 1.0 0.39 0.35 0.71 0.45 0.32 0.0 0.15 0.33 0.26 0.73
AMTR_s00017p00088320 (evm_27.TU.AmTr_v1.0_scaffold00017.33)
 0.0 0.0 0.0 0.0 1.0 0.56 0.16 0.09 0.14 0.17 0.03 0.46 0.04 0.05 0.77 0.0 0.01 0.02 0.15 0.05 0.03 0.09
AMTR_s00019p00207660 (evm_27.TU.AmTr_v1.0_scaffold00019.247)
 0.0 0.0 0.0 0.16 0.65 0.0 0.0 0.0 0.0 0.0 1.0 0.37 0.07 0.14 0.33 0.04 0.26 0.23 0.09 0.01 0.0 0.04
AMTR_s00019p00207760 (evm_27.TU.AmTr_v1.0_scaffold00019.248)
 0.0 0.0 0.0 0.04 0.43 0.0 0.0 0.0 0.0 0.0 1.0 0.98 0.21 0.54 0.79 0.25 0.31 0.46 0.3 0.1 0.02 0.23
AMTR_s00019p00208020 (evm_27.TU.AmTr_v1.0_scaffold00019.249)
 0.0 0.0 0.0 0.0 0.61 0.0 0.0 0.0 0.0 0.0 1.0 0.79 0.21 0.43 0.62 0.1 0.19 0.34 0.25 0.03 0.0 0.12
AMTR_s00021p00096590 (evm_27.TU.AmTr_v1.0_scaffold00021.41)
 0.0 0.0 0.0 0.0 0.27 0.0 0.01 0.0 0.02 0.03 0.0 1.0 0.03 0.03 0.01 0.0 0.0 0.0 0.12 0.09 0.14 0.0
AMTR_s00022p00123300 (evm_27.TU.AmTr_v1.0_scaffold00022.115)
 0.25 0.48 0.59 0.25 0.4 0.21 0.09 0.09 0.07 0.08 0.66 1.0 0.56 0.5 0.3 0.63 0.12 0.42 0.22 0.13 0.14 0.17
AMTR_s00025p00098370 (evm_27.TU.AmTr_v1.0_scaffold00025.80)
 0.0 0.0 0.0 0.0 0.82 0.0 0.16 0.0 0.3 0.18 0.07 0.72 0.31 0.22 1.0 0.16 0.49 0.0 0.21 0.0 0.76 0.3
AMTR_s00028p00068090 (evm_27.TU.AmTr_v1.0_scaffold00028.13)
 0.0 0.0 0.0 0.0 1.0 0.0 0.0 0.0 0.0 0.0 0.69 0.0 0.52 0.25 0.06 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00028p00188160 (evm_27.TU.AmTr_v1.0_scaffold00028.81)
 0.16 0.0 0.2 0.0 0.93 0.0 0.0 0.0 0.0 0.0 0.24 0.0 0.13 1.0 0.26 0.56 0.0 0.0 0.0 0.0 0.0 0.12
AMTR_s00029p00046050 (evm_27.TU.AmTr_v1.0_scaffold00029.33)
 0.0 0.0 0.0 0.0 0.37 0.0 0.02 0.0 0.04 0.0 0.27 1.0 0.03 0.0 0.12 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00029p00110150 (evm_27.TU.AmTr_v1.0_scaffold00029.117)
 0.0 0.0 0.0 0.16 0.12 0.0 0.0 0.0 0.0 0.0 0.23 1.0 0.03 0.11 0.43 0.05 0.0 0.0 0.0 0.0 0.0 0.01
AMTR_s00029p00110690 (evm_27.TU.AmTr_v1.0_scaffold00029.118)
 0.0 0.32 0.0 0.0 0.22 0.0 0.0 0.0 0.01 0.0 0.34 1.0 0.08 0.5 0.5 0.09 0.03 0.02 0.03 0.01 0.02 0.06
AMTR_s00034p00235030 (evm_27.TU.AmTr_v1.0_scaffold00034.117)
 0.0 0.0 0.0 0.0 0.03 0.0 0.0 0.0 0.0 0.0 0.13 1.0 0.2 0.0 0.17 0.11 0.01 0.36 0.13 0.04 0.12 0.17
AMTR_s00038p00150140 (evm_27.TU.AmTr_v1.0_scaffold00038.91)
 0.15 0.1 0.3 0.16 0.78 0.01 0.08 0.15 0.27 0.24 0.55 1.0 0.7 0.55 0.53 0.13 0.35 0.31 0.32 0.31 0.25 0.31
AMTR_s00049p00133800 (evm_27.TU.AmTr_v1.0_scaffold00049.113)
 0.0 0.0 0.0 0.32 0.79 0.0 0.05 0.02 0.04 0.04 0.36 1.0 0.24 0.03 0.45 0.03 0.02 0.01 0.0 0.0 0.0 0.0
AMTR_s00051p00208220 (evm_27.TU.AmTr_v1.0_scaffold00051.91)
 0.19 0.17 0.21 0.29 0.13 0.2 0.44 0.13 0.51 0.54 0.78 0.85 0.94 0.9 0.82 0.73 0.23 1.0 0.85 0.5 0.54 0.42
AMTR_s00052p00165290 (evm_27.TU.AmTr_v1.0_scaffold00052.73)
 0.0 0.0 0.0 0.0 0.16 0.0 0.0 0.0 0.0 0.0 0.84 0.44 0.11 0.01 0.07 0.48 0.04 1.0 0.31 0.24 0.04 0.0
AMTR_s00052p00166190 (evm_27.TU.AmTr_v1.0_scaffold00052.75)
 0.0 0.0 0.23 0.01 0.01 0.0 0.0 0.0 0.0 0.0 0.77 0.13 0.68 0.46 0.27 0.73 0.07 1.0 0.0 0.09 0.0 0.0
AMTR_s00053p00132370 (evm_27.TU.AmTr_v1.0_scaffold00053.81)
 0.2 0.0 0.0 0.0 0.09 0.0 0.03 0.0 0.01 0.01 0.31 0.29 0.12 0.3 0.15 0.0 0.02 1.0 0.84 0.01 0.0 0.05
AMTR_s00055p00160920 (evm_27.TU.AmTr_v1.0_scaffold00055.79)
 0.54 0.24 0.75 0.71 0.08 0.44 0.01 0.0 0.02 0.02 0.35 1.0 0.39 0.11 0.06 0.0 0.06 0.1 0.28 0.06 0.04 0.1
AMTR_s00055p00216840 (evm_27.TU.AmTr_v1.0_scaffold00055.162)
 0.74 0.0 0.48 0.09 0.44 0.0 0.19 0.0 0.14 0.14 0.59 0.97 0.39 0.37 0.24 0.77 0.23 1.0 0.45 0.33 0.21 0.25
AMTR_s00056p00143320 (evm_27.TU.AmTr_v1.0_scaffold00056.118)
 0.09 0.03 0.13 0.06 0.39 0.01 0.0 0.0 0.0 0.0 0.68 1.0 0.25 0.11 0.68 0.19 0.2 0.13 0.11 0.05 0.02 0.1
AMTR_s00058p00165860 (evm_27.TU.AmTr_v1.0_scaffold00058.149)
 0.0 0.0 0.0 0.0 1.0 0.0 0.0 0.0 0.14 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
0.11 0.07 0.05 0.0 0.79 0.51 0.02 0.09 0.01 0.02 0.2 1.0 0.41 0.52 0.42 0.15 0.31 0.17 0.18 0.06 0.05 0.21
AMTR_s00059p00173760 (evm_27.TU.AmTr_v1.0_scaffold00059.172)
 0.0 0.0 0.0 0.0 1.0 0.39 0.0 0.0 0.0 0.0 0.0 0.04 0.0 0.0 0.26 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00061p00152190 (evm_27.TU.AmTr_v1.0_scaffold00061.135)
 0.34 0.12 0.0 0.09 0.02 0.0 0.0 0.0 0.0 0.0 0.51 1.0 0.15 0.11 0.48 0.14 0.23 0.38 0.15 0.09 0.13 0.16
AMTR_s00067p00190600 (evm_27.TU.AmTr_v1.0_scaffold00067.207)
 0.02 0.0 0.0 0.0 0.61 0.0 0.0 0.0 0.0 0.0 1.0 0.66 0.65 0.69 0.79 0.0 0.04 0.0 0.0 0.0 0.0 0.0
AMTR_s00070p00121690 (evm_27.TU.AmTr_v1.0_scaffold00070.65)
 0.0 0.0 0.0 0.0 1.0 0.0 0.02 0.0 0.22 0.12 0.0 0.0 0.0 0.03 0.4 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00077p00160000 (evm_27.TU.AmTr_v1.0_scaffold00077.166)
 0.23 0.0 0.12 0.0 0.25 0.0 0.0 0.0 0.0 0.0 0.23 1.0 0.05 0.01 0.06 0.04 0.11 0.09 0.05 0.01 0.02 0.18
AMTR_s00079p00111670 (evm_27.TU.AmTr_v1.0_scaffold00079.41)
 0.0 0.0 0.0 0.0 0.07 0.0 0.0 0.0 0.02 0.07 0.0 1.0 0.11 0.04 0.15 0.0 0.0 0.0 0.0 0.05 0.0 0.18
AMTR_s00080p00163630 (evm_27.TU.AmTr_v1.0_scaffold00080.82)
 0.01 0.0 0.0 0.0 1.0 0.1 0.12 0.23 0.06 0.07 0.0 0.42 0.0 0.04 0.45 0.02 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00088p00030260 (evm_27.TU.AmTr_v1.0_scaffold00088.14)
 0.12 0.23 0.27 0.48 0.1 0.0 0.17 0.0 0.17 0.17 0.41 1.0 0.48 0.27 0.07 0.15 0.21 0.17 0.29 0.09 0.29 0.05
AMTR_s00091p00043740 (evm_27.TU.AmTr_v1.0_scaffold00091.9)
 0.0 0.0 0.0 0.14 1.0 0.44 0.04 0.0 0.08 0.09 0.02 0.0 0.1 0.06 0.67 0.05 0.0 0.0 0.16 0.06 0.06 0.05
AMTR_s00091p00146840 (evm_27.TU.AmTr_v1.0_scaffold00091.58)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.03 0.29 1.0 0.27 0.23 0.08 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00097p00038490 (evm_27.TU.AmTr_v1.0_scaffold00097.8)
 0.0 0.0 0.0 0.0 1.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.28 0.39 0.04 0.0 0.0 0.0 0.0 0.0 0.0 0.06
AMTR_s00109p00027810 (evm_27.TU.AmTr_v1.0_scaffold00109.13)
 0.33 0.0 0.32 0.01 0.14 0.0 0.02 0.0 0.01 0.0 0.41 1.0 0.39 0.16 0.21 0.3 0.06 0.04 0.11 0.15 0.07 0.03
AMTR_s00111p00148440 (evm_27.TU.AmTr_v1.0_scaffold00111.132)
 0.0 0.0 0.0 0.0 0.69 0.0 0.19 0.0 0.34 0.48 0.53 1.0 0.16 0.06 0.57 0.16 0.24 0.18 0.23 0.08 0.16 0.57
AMTR_s00114p00109380 (evm_27.TU.AmTr_v1.0_scaffold00114.45)
 0.0 0.0 0.0 0.0 0.09 0.0 0.04 0.0 0.21 0.05 0.88 1.0 0.08 0.33 0.03 0.68 0.23 0.0 0.0 0.13 0.0 0.22
AMTR_s00125p00020290 (evm_27.TU.AmTr_v1.0_scaffold00125.3)
 0.0 0.0 0.0 0.0 0.03 0.0 0.0 0.0 0.0 0.0 0.0 1.0 0.01 0.05 0.01 0.0 0.0 0.0 0.0 0.03 0.0 0.0
AMTR_s00142p00024020 (evm_27.TU.AmTr_v1.0_scaffold00142.6)
 0.0 0.0 0.0 0.32 0.0 0.0 0.02 0.0 0.09 0.06 0.46 1.0 0.17 0.12 0.1 0.0 0.14 0.0 0.09 0.42 0.0 0.14
AMTR_s00169p00025570 (evm_27.TU.AmTr_v1.0_scaffold00169.12)
 0.0 0.0 0.0 0.0 0.87 0.0 0.29 0.01 0.36 0.31 0.76 1.0 0.09 0.07 0.58 0.06 0.78 0.0 0.05 0.0 0.0 0.27
AMTR_s00180p00027580 (evm_27.TU.AmTr_v1.0_scaffold00180.13)
 0.12 0.04 0.02 0.16 0.34 0.0 0.13 0.06 0.15 0.19 0.94 1.0 0.59 0.49 0.56 0.27 0.43 0.44 0.56 0.14 0.43 0.33
AMTR_s00184p00023660 (evm_27.TU.AmTr_v1.0_scaffold00184.8)
 0.04 0.07 0.05 0.01 0.21 0.0 0.0 0.0 0.01 0.01 0.11 1.0 0.13 0.0 0.03 0.0 0.0 0.0 0.07 0.0 0.0 0.15

Details

Expression values normalized per gene (using the maximum value, Green cells indicate low expression and red high. (Dark gray cells indicate missing values)