Heatmap: Cluster_101 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00001p00117300 (evm_27.TU.AmTr_v1.0_scaffold00001.85)
-4.23 0.03 -0.81 0.82 -0.09 -5.67 -5.09 -7.5 -5.72 -5.22 0.88 1.16 0.96 0.88 0.82 -0.36 -0.32 -0.08 -0.03 -0.14 -1.29 1.63
AMTR_s00001p00267450 (evm_27.TU.AmTr_v1.0_scaffold00001.414)
- - - - - - - - - - 4.46 - - - - - - - - - - -
AMTR_s00002p00252340 (evm_27.TU.AmTr_v1.0_scaffold00002.368)
- - - - 0.19 - -5.46 - -2.72 -2.82 0.58 0.76 -1.89 1.05 0.12 -0.39 - 1.57 -1.08 - 3.0 0.79
AMTR_s00002p00259790 (evm_27.TU.AmTr_v1.0_scaffold00002.440)
- 1.79 -5.58 -8.24 -5.2 - - - -6.16 -7.67 2.12 2.1 2.04 -0.37 -0.42 -3.34 1.46 -2.97 -0.08 -2.54 - -3.29
AMTR_s00002p00259800 (evm_27.TU.AmTr_v1.0_scaffold00002.441)
- 1.82 - -4.95 -3.25 - -6.95 - -6.18 -7.01 2.08 2.23 1.47 -0.2 -0.3 -1.3 1.68 -1.92 -0.24 -2.79 - -3.74
AMTR_s00003p00122970 (evm_27.TU.AmTr_v1.0_scaffold00003.89)
- - - - -1.64 - - - -4.14 - -1.42 0.37 -2.1 -3.25 -2.37 0.8 0.35 - 1.93 -3.57 3.6 -1.37
AMTR_s00004p00096600 (evm_27.TU.AmTr_v1.0_scaffold00004.78)
- - - - -0.66 - - - -0.88 - 1.96 - 0.51 - 0.23 - - - - 2.05 3.35 -
AMTR_s00005p00248790 (evm_27.TU.AmTr_v1.0_scaffold00005.151)
- - - - -0.85 - - - -2.01 - 2.77 - 0.94 -1.73 0.71 2.36 0.94 - - -0.35 - 1.42
AMTR_s00010p00257370 (evm_27.TU.AmTr_v1.0_scaffold00010.401)
- - - - -2.79 - -3.24 - -3.2 -3.95 0.07 0.89 0.32 -1.89 -5.15 -0.26 -0.36 -0.89 0.69 -1.98 3.71 -5.45
AMTR_s00011p00264690 (evm_27.TU.AmTr_v1.0_scaffold00011.213)
- - - - - - -0.35 - 1.7 1.65 2.74 2.9 -1.98 -2.21 -2.28 - - - - - - -
AMTR_s00012p00265510 (evm_27.TU.AmTr_v1.0_scaffold00012.372)
- - - - -1.16 - - - - - 3.95 - 1.54 -0.93 0.71 - - - - - - 0.03
AMTR_s00014p00234810 (evm_27.TU.AmTr_v1.0_scaffold00014.96)
- - - - 1.2 - -1.27 - -0.26 -1.99 0.72 1.46 0.28 -0.08 1.87 0.9 -0.68 1.27 - 0.32 - 0.87
AMTR_s00016p00062750 (evm_27.TU.AmTr_v1.0_scaffold00016.29)
- - - - - - - - - - 2.27 - 2.16 - - - - - - - 3.66 -
AMTR_s00017p00180400 (evm_27.TU.AmTr_v1.0_scaffold00017.93)
-0.44 -0.96 -0.22 0.44 -0.59 - -6.77 - -9.6 -8.52 1.93 1.3 0.77 0.37 -0.12 -2.33 1.46 1.28 0.88 -2.1 -4.82 -2.61
AMTR_s00018p00035270 (evm_27.TU.AmTr_v1.0_scaffold00018.8)
- - - - - - - - - 0.61 1.43 - 0.56 0.65 0.83 - 3.03 - - 1.62 - 0.79
AMTR_s00020p00223670 (evm_27.TU.AmTr_v1.0_scaffold00020.94)
- - - - 1.29 - - - - - 4.14 - -0.58 -0.51 -0.88 - - - - - - -
AMTR_s00022p00030220 (evm_27.TU.AmTr_v1.0_scaffold00022.13)
- - - - 0.55 - - - 0.49 -0.37 1.4 - 0.93 -0.74 -0.06 - 1.01 1.95 - 1.27 1.8 -0.97
AMTR_s00022p00195750 (evm_27.TU.AmTr_v1.0_scaffold00022.223)
- - - - - - - - - - 3.31 - - - - - 2.13 - - 0.16 - 2.72
AMTR_s00022p00246580 (evm_27.TU.AmTr_v1.0_scaffold00022.366)
- - - - -0.34 - - - -2.72 -2.1 2.66 - -1.09 -2.51 1.19 - 3.27 - - - - 0.95
AMTR_s00022p00250740 (evm_27.TU.AmTr_v1.0_scaffold00022.385)
- - - - -2.25 - -0.73 - 0.1 0.19 1.74 1.94 0.96 -1.77 1.8 - 2.39 - - - - -0.24
AMTR_s00025p00242020 (evm_27.TU.AmTr_v1.0_scaffold00025.371)
- 0.35 - - -1.94 - - - -1.91 -2.09 0.82 - -0.3 -0.61 0.32 - 2.59 - - -0.41 2.58 1.45
AMTR_s00026p00236260 (evm_27.TU.AmTr_v1.0_scaffold00026.132)
- - - - 1.7 - -1.92 - -0.71 -1.91 1.03 - 0.01 - - - 3.05 - - - 2.42 -0.13
AMTR_s00029p00215010 (evm_27.TU.AmTr_v1.0_scaffold00029.321)
- - - - - - - - - - 4.21 - - - - - - - - 1.82 - -
AMTR_s00032p00214330 (evm_27.TU.AmTr_v1.0_scaffold00032.210)
- - - - 2.81 - - - - 0.44 3.77 - - - - - - - - - - -
AMTR_s00032p00223370 (evm_27.TU.AmTr_v1.0_scaffold00032.234)
0.27 0.27 -0.73 -0.03 -0.38 -0.03 -0.51 -1.42 -1.11 -1.18 0.63 0.92 0.38 0.17 0.41 0.38 -0.85 0.19 0.21 0.13 -1.3 0.53
AMTR_s00034p00047290 (evm_27.TU.AmTr_v1.0_scaffold00034.8)
- - - - - - - - - 0.14 4.02 - 0.79 - 0.14 - - - - 0.85 - -
AMTR_s00035p00192640 (evm_27.TU.AmTr_v1.0_scaffold00035.41)
- - - - 1.01 - - - 0.29 - 3.65 - 1.25 - 1.94 - - - - - - -
AMTR_s00036p00214160 (evm_27.TU.AmTr_v1.0_scaffold00036.139)
- - - -2.1 0.79 - - - - - - - -1.73 - - - 1.38 - - -1.26 4.06 -
AMTR_s00038p00159610 (evm_27.TU.AmTr_v1.0_scaffold00038.96)
- 0.38 - - -1.12 - 0.54 -1.26 0.45 -0.01 1.68 0.01 -0.16 0.8 -0.49 -0.55 -0.13 1.4 -0.34 0.48 -0.34 0.29
AMTR_s00039p00095670 (evm_27.TU.AmTr_v1.0_scaffold00039.52)
- - - - 2.01 - - - -22.28 - 3.06 - - 2.08 2.44 - - - - -14.89 - -
AMTR_s00041p00179870 (evm_27.TU.AmTr_v1.0_scaffold00041.144)
- - - - - - - - - - 4.46 - - - - - - - - - - -
AMTR_s00042p00026240 (evm_27.TU.AmTr_v1.0_scaffold00042.5)
- - - - - - -1.58 - -0.47 -1.87 2.55 - -0.7 0.41 -0.54 - 2.0 1.83 - 1.72 - 0.41
AMTR_s00046p00207820 (evm_27.TU.AmTr_v1.0_scaffold00046.131)
- - - - - - - - - - 4.46 - - - - - - - - - - -
AMTR_s00047p00073050 (evm_27.TU.AmTr_v1.0_scaffold00047.17)
- - - - -0.26 - - - - - - - -0.22 -1.65 -0.22 - - - 1.15 -0.56 3.97 -0.97
AMTR_s00052p00166960 (evm_27.TU.AmTr_v1.0_scaffold00052.76)
- - - - 1.42 - - - - - - - - -1.47 -1.82 - 2.07 - - - 3.86 -
AMTR_s00053p00167750 (evm_27.TU.AmTr_v1.0_scaffold00053.114)
- 0.19 - - -0.5 - -6.25 - - - 0.49 2.16 0.41 -1.89 -0.23 0.94 1.08 1.5 0.8 0.2 0.35 -0.35
-20.81 - - 1.41 1.22 - - - -13.68 - 2.08 - 0.17 - 0.13 - - - - 0.11 3.25 -
AMTR_s00056p00168250 (evm_27.TU.AmTr_v1.0_scaffold00056.148)
-0.38 - 0.21 1.05 -1.23 - -2.88 - -2.47 -3.28 1.27 1.77 1.54 -0.43 -1.1 -4.74 1.88 -0.4 -0.8 0.06 -3.52 0.01
AMTR_s00058p00157380 (evm_27.TU.AmTr_v1.0_scaffold00058.134)
- - - - - - -0.92 - -0.98 -0.1 2.58 3.61 -0.7 -4.62 0.28 - - - - - - -
AMTR_s00059p00118280 (evm_27.TU.AmTr_v1.0_scaffold00059.92)
- - - - 0.39 - - - - - 1.12 0.17 -1.73 -3.27 1.29 -2.4 0.66 1.88 -0.14 1.42 2.34 -1.25
AMTR_s00063p00106240 (evm_27.TU.AmTr_v1.0_scaffold00063.20)
- - - - - - - - - - 4.35 - - - 0.68 - - - - - - -
AMTR_s00064p00152030 (evm_27.TU.AmTr_v1.0_scaffold00064.60)
- - - - - - - - - - 4.46 - - - - - - - - - - -
AMTR_s00065p00199650 (evm_27.TU.AmTr_v1.0_scaffold00065.181)
- - - - -0.81 - - - - -1.59 3.18 - 1.68 - -1.59 - - - - 2.95 - -0.4
AMTR_s00066p00122890 (evm_27.TU.AmTr_v1.0_scaffold00066.117)
-8.57 -0.55 -0.52 1.4 -0.27 -5.85 -2.92 -8.61 -2.73 -2.71 0.63 0.52 1.44 0.99 0.51 -1.09 0.51 -0.59 -0.33 0.07 -0.35 1.26
AMTR_s00067p00041050 (evm_27.TU.AmTr_v1.0_scaffold00067.22)
- - - - - - -2.23 - -1.85 - 3.24 2.41 0.75 -1.45 0.44 - - - 1.24 -0.03 - -
AMTR_s00067p00142790 (evm_27.TU.AmTr_v1.0_scaffold00067.133)
- - - 0.69 - - - - - - 4.09 - - - 0.41 - - - - - - 1.01
AMTR_s00067p00194300 (evm_27.TU.AmTr_v1.0_scaffold00067.209)
- - - - - - - - - - 4.46 - - - - - - - - - - -
AMTR_s00067p00206010 (evm_27.TU.AmTr_v1.0_scaffold00067.227)
-0.58 0.82 0.23 1.12 -0.4 -4.9 -2.78 -6.23 -3.4 -3.15 1.37 1.36 0.98 -0.06 -1.29 -0.5 0.21 0.15 -0.11 -0.53 -2.33 0.84
AMTR_s00068p00123470 (evm_27.TU.AmTr_v1.0_scaffold00068.80)
-0.31 -7.43 -1.77 -0.43 0.17 -2.95 -2.41 -0.47 -1.07 -0.99 0.88 1.41 0.18 0.58 0.34 -0.23 0.17 -0.24 -0.76 -0.36 -1.46 2.02
AMTR_s00069p00179430 (evm_27.TU.AmTr_v1.0_scaffold00069.171)
- - - - - - - - - - 4.46 - - - - - - - - - - -
AMTR_s00070p00154860 (evm_27.TU.AmTr_v1.0_scaffold00070.97)
- - - - - - - - - - 3.76 - 2.16 - 1.98 - - - - - - -
AMTR_s00070p00193550 (evm_27.TU.AmTr_v1.0_scaffold00070.126)
-0.16 - - -0.4 -0.48 - -6.69 - -5.6 -6.24 1.11 2.47 1.42 -1.56 -1.25 - 0.61 -1.53 -0.98 0.5 -1.68 2.12
AMTR_s00073p00065480 (evm_27.TU.AmTr_v1.0_scaffold00073.19)
- - - - - - - - - - 4.17 - - - 1.24 - - - - 0.75 - -
AMTR_s00074p00168990 (evm_27.TU.AmTr_v1.0_scaffold00074.82)
- - - - - - - - 1.33 - 4.28 - - - - - - - - - - -
AMTR_s00077p00034390 (evm_27.TU.AmTr_v1.0_scaffold00077.16)
-6.42 - - -0.14 -4.71 - -7.95 - -7.26 -7.68 0.54 0.41 1.05 -4.04 -1.03 -3.38 2.52 2.08 0.24 1.69 -0.1 -2.07
AMTR_s00084p00112590 (evm_27.TU.AmTr_v1.0_scaffold00084.31)
- - - - - - - - -1.55 -6.43 3.79 - -2.94 -1.01 - - -1.53 - - 2.77 - -
AMTR_s00086p00098920 (evm_27.TU.AmTr_v1.0_scaffold00086.49)
- - - - 2.8 - - - - - 3.91 - - - - - - - - - - -
AMTR_s00088p00074360 (evm_27.TU.AmTr_v1.0_scaffold00088.42)
1.24 -0.23 0.58 -0.11 -2.82 -5.32 -4.76 - -5.37 -5.64 1.78 1.49 0.3 0.07 -0.08 -5.47 2.34 -0.25 -1.4 -3.8 -5.84 -2.03
AMTR_s00088p00085220 (evm_27.TU.AmTr_v1.0_scaffold00088.51)
- - - - - - - - - - 3.17 - 0.95 0.35 2.62 - - - - 0.74 - 0.99
AMTR_s00088p00178880 (evm_27.TU.AmTr_v1.0_scaffold00088.158)
-2.66 - - - -2.46 - -6.7 -1.88 -0.22 -0.87 0.7 0.26 0.69 -1.22 -2.18 -3.23 2.3 0.7 0.62 -0.34 1.85 1.21
AMTR_s00089p00068070 (evm_27.TU.AmTr_v1.0_scaffold00089.27)
- - - - -0.53 - - - - - 2.52 - 1.08 - - - 2.13 2.07 - - 1.93 0.08
- - - - 2.44 - - - - - 3.69 - - - 1.89 - - - - - - -
AMTR_s00097p00110700 (evm_27.TU.AmTr_v1.0_scaffold00097.21)
- - - - 1.35 - - - - - 3.1 - - - -0.63 - 2.7 - - 1.9 - -
AMTR_s00119p00041570 (evm_27.TU.AmTr_v1.0_scaffold00119.22)
-5.77 - -6.57 - -4.04 - - - -6.79 - 2.62 2.42 0.77 -3.22 -3.06 0.19 1.4 1.21 0.62 -1.05 -1.53 -6.47
AMTR_s00125p00116990 (evm_27.TU.AmTr_v1.0_scaffold00125.30)
- - - - -3.55 - -3.87 -1.43 -3.15 -3.77 3.11 2.77 -6.84 -4.93 -2.6 -3.38 -1.07 0.8 1.07 -1.13 -0.36 -6.51
AMTR_s00133p00085410 (evm_27.TU.AmTr_v1.0_scaffold00133.36)
- - - - -1.99 - - - - - 3.7 - -2.03 -4.33 - - -0.73 - - - - 2.98
- - - - - - - - 1.07 - 4.31 - - - - - - - - - - -
AMTR_s00142p00070800 (evm_27.TU.AmTr_v1.0_scaffold00142.40)
- - - - 2.14 - - - - - - - 1.7 1.67 1.31 - 2.92 - - - - 0.16
AMTR_s00151p00090450 (evm_27.TU.AmTr_v1.0_scaffold00151.26)
- - - - - - - - -0.0 - 3.1 - 1.79 - - - 2.86 - - - - 0.82
AMTR_s00152p00067310 (evm_27.TU.AmTr_v1.0_scaffold00152.19)
- - - - 1.53 - - - - - - - -1.65 - - - - - - - 4.23 -
AMTR_s00156p00065950 (evm_27.TU.AmTr_v1.0_scaffold00156.34)
- - - - 1.61 - - - 0.32 - 4.14 - - - - - - - - - - -
AMTR_s00160p00038440 (evm_27.TU.AmTr_v1.0_scaffold00160.8)
- 1.78 - -0.51 -1.35 - - - -3.69 -4.28 0.74 0.65 1.08 0.98 0.27 -3.61 -0.56 -0.43 -0.75 0.55 -1.08 2.26
AMTR_s00165p00049730 (evm_27.TU.AmTr_v1.0_scaffold00165.31)
1.74 - - 1.81 -2.46 - -3.72 - -4.26 -4.06 1.21 0.81 1.69 1.24 -1.55 -0.88 0.78 -1.97 -2.73 -1.41 -3.13 0.71
AMTR_s00203p00034090 (evm_27.TU.AmTr_v1.0_scaffold00203.14)
- - - 1.75 1.39 - - - - - 3.86 - - - 0.61 - - - - - - -
AMTR_s00207p00029640 (evm_27.TU.AmTr_v1.0_scaffold00207.7)
- - - 1.6 0.25 - - - - - 2.92 - - -0.43 3.24 - - - - - - -
AMTR_s03766p00005550 (evm_27.TU.AmTr_v1.0_scaffold03766.1)
-0.46 -0.09 -0.89 -4.08 -4.72 -8.1 -7.92 - -7.63 -8.03 1.16 1.34 1.15 0.96 -3.05 -1.93 2.27 0.25 -0.33 -0.77 -1.07 1.32
AMTR_s03847p00004090 (evm_27.TU.AmTr_v1.0_scaffold03847.1)
- - - -0.79 0.25 - -3.32 - -4.1 - - - -1.94 -3.52 - - -0.64 0.29 - -0.77 4.11 -
AMTR_s05431p00006580 (evm_27.TU.AmTr_v1.0_scaffold05431.1)
- - 1.85 - - - - - - - - - - - - - - - - - 4.2 -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.