Heatmap: Cluster_100 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Ovary
Microspore
Generative cell
Pollen
Sperm cell
Pollen grain
Pollen tube
Pollen tube (1.5h)
Pollen tube (3h)
Pollen tube (9h)
Pistil
Style (before flowering)
Style (after flowering)
Style (pollinated, after flowering)
Flower (buds)
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Pericarp/Exocarp (4 DPA)
Pericarp
Pericarp (5 DPA)
Pericarp (7 DPA)
Pericarp (10 DPA)
Fruit (mature green)
Fruit (breaker stage)
Septum (7 DPA)
Septum (10 DPA)
Septum/Seed (4 DPA)
Seed (5 DPA)
Seed (7 DPA)
Seed (10 DPA)
Seeds (10 DPA)
Seeds (20 DPA)
Seeds (30 DPA)
Seeds (Pk-stem)
Seeds (Br-stem)
Seeds (Pk-equatorial)
Seeds (Pk-stylar)
Seeds (Br-stylar)
Seeds
Seeds (RR)
Seeds (LR)
Seeds (MG-equatorial)
Hypocotyl
Seedling (leaves)
Seedling (roots)
Callus
Meristem (vegetative)
Meristem
Apical meristem
Leaf
Root
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root hair cells
1.0 1.81 1.46 -4.85 -6.61 - - -12.35 -11.79 - - - 1.05 -2.46 -4.07 -3.26 0.82 -0.37 0.45 1.66 -0.23 2.04 0.49 -0.31 -0.64 -1.08 0.64 -0.09 -1.88 -1.26 -0.42 -0.99 -0.44 0.28 -0.64 -2.71 1.1 1.41 1.56 1.57 1.41 0.93 1.58 1.22 -2.21 -3.64 -1.13 -4.63 -2.79 -0.87 -0.53 -0.2 -0.25 -2.16 - - - -6.72
- 1.03 - 1.45 3.44 - - -2.52 - -0.16 - - 2.9 -1.16 -0.25 0.93 2.53 -0.84 - 1.79 1.43 - 1.64 -0.16 -1.26 - - 1.2 - - 1.6 - - - - - - -2.98 - - - -1.88 - - - - - - 0.72 1.45 1.63 - -0.86 - - - - -
-0.87 -1.48 0.42 -2.71 -5.56 - -4.91 -6.23 -7.39 - -7.8 -6.95 -0.71 -0.82 -0.63 -0.47 -0.93 -0.58 1.96 2.48 -1.35 0.05 -3.11 -2.06 -1.63 0.56 0.19 -1.15 1.11 -1.18 -3.12 -2.13 -2.04 -3.09 -0.09 -1.2 -2.95 -1.9 -3.47 -2.26 -2.47 -1.71 -2.4 -2.43 -0.95 -2.49 -2.69 3.07 3.94 -5.25 -4.38 -2.37 0.12 1.79 -2.87 -6.73 -7.09 0.44
-2.0 -1.76 0.92 -1.27 -6.22 - - -8.09 - - - - -0.19 0.54 0.14 -0.06 1.21 0.31 0.49 0.54 0.65 2.18 0.12 -0.14 -0.26 -0.89 -0.77 0.37 0.91 0.42 -0.38 -0.82 -0.58 -1.03 -1.33 -2.26 -2.22 -2.04 -2.15 -2.64 -1.57 -1.14 -2.53 -3.12 -0.23 1.02 0.61 2.13 -2.09 -0.59 -0.13 0.47 0.52 2.14 1.12 1.1 0.08 0.63
-1.73 -3.18 -0.36 -2.72 -2.12 - -6.64 -7.59 -9.3 - - - -0.51 0.73 2.68 2.94 1.26 0.44 -2.3 -1.6 0.31 -3.31 -1.04 -0.12 0.18 0.74 -0.15 0.32 1.04 0.54 0.41 1.31 1.99 -3.17 -2.1 -0.5 -3.04 -3.08 -3.98 -5.62 - -2.37 -3.3 -3.94 -0.97 2.42 -0.51 0.82 -5.73 - - -0.77 0.35 -0.01 -2.05 -1.43 - 1.65
-0.33 - - -0.95 0.94 - - - - - - - - - - -2.4 - 5.52 - - - - - - - - - - - - - - - - - - - - - 0.65 - -0.35 1.02 2.07 - - - - - - - - - - - - - -
0.89 -0.11 - 0.09 1.02 - - - - - - - -0.13 0.92 1.66 2.98 - 1.68 - - - - - -3.21 - - - - - - - - -2.95 - - - - - - - - -0.87 0.51 2.56 - - - 2.24 3.91 - - - -2.72 -0.26 0.19 - -1.09 2.21
-1.34 -1.67 -0.8 2.3 1.37 1.99 1.32 2.31 2.13 0.38 1.05 1.2 0.91 0.95 0.95 0.89 -0.25 -0.14 -2.54 -1.81 -1.59 - -2.44 -2.41 -3.19 -1.99 -1.84 -1.56 -1.13 -2.21 -2.02 -1.93 -3.27 0.78 -0.97 - - -3.36 - - -1.03 -3.54 - -0.99 - 0.21 -2.42 0.88 0.03 -4.64 -1.38 -0.91 -1.97 2.21 0.5 -3.6 - -
-4.02 - -2.78 -3.2 - - - - -6.51 - - - -3.94 -2.81 - -2.6 0.84 -2.4 -1.73 1.35 2.32 -2.23 3.97 2.95 2.22 -3.16 2.19 2.0 -2.25 -0.97 -1.79 -1.32 0.35 - -1.28 - -2.25 -1.29 0.37 -0.58 - -0.92 0.14 0.41 - - - - -2.34 -2.04 -1.58 -4.18 -0.22 -4.0 - -3.79 -3.83 -
-0.47 -0.26 0.37 -0.72 - - - -3.66 - - - - - - - - - -2.33 3.76 3.85 2.19 - 1.8 2.1 1.2 - -0.57 0.26 - 0.07 -0.92 - -1.98 2.13 - - - - - 0.82 - -1.23 - - - - -1.96 - -1.42 - - - -0.29 - - - - -
- - -0.88 -0.39 -0.93 - -1.57 - - - - - 0.04 - - -1.35 0.56 -0.6 - - - - - -2.51 - - -2.18 - - - - - - - - - - - - -0.29 1.09 -4.26 - - - 0.98 0.68 -0.05 -15.35 - - -0.9 1.58 - - 1.36 5.26 -
- - - 0.75 - - -4.48 - - - - - - -3.23 -2.08 5.05 -0.71 -0.77 - -3.59 - - - -3.19 - - - -3.26 -4.4 -11.95 -4.19 -3.29 - - - - -0.29 -0.09 1.62 2.61 1.77 -0.24 - 0.44 - - - -4.62 2.04 - - -3.41 -2.0 -3.54 - - - -
- - - -0.54 - - -4.25 - - - - - -4.16 -4.54 - 4.67 0.35 -4.19 - -3.41 - - - -4.87 - - - - - - - - - - - - -0.1 0.52 2.33 2.98 0.99 0.99 1.01 2.99 - - - -2.72 -1.12 - - -3.19 -1.95 - - - - -
- - -2.7 1.7 -0.83 - - -3.4 -2.56 -2.05 -1.04 - -0.72 -3.06 -0.23 -0.51 1.24 -1.18 - - 0.74 1.14 0.43 -1.0 1.06 - 1.15 1.76 -0.85 0.22 1.48 2.25 1.03 - 1.11 - - 0.88 1.26 - - 0.82 0.4 1.3 0.1 1.01 - -2.54 1.48 - 0.27 -1.34 -2.06 -1.57 1.62 - - -
-3.71 -3.66 -1.29 0.04 -1.08 0.66 0.31 1.23 0.78 1.77 1.71 1.9 -1.09 -2.2 -3.57 -1.67 1.19 0.67 -2.79 -0.29 0.16 - 0.59 0.82 -0.35 -5.15 -6.53 1.27 -2.19 -0.31 -0.92 -1.26 -2.07 -1.88 -3.49 -5.26 -5.31 -6.25 - -5.78 - -5.28 - -3.23 -5.43 2.35 -0.63 -1.03 -0.15 1.02 1.43 1.72 1.27 2.06 -2.5 -3.45 -6.0 -2.02
-8.42 - -1.66 -8.83 - - - - - - - - -7.73 -8.44 -9.8 -9.12 -1.8 -3.25 - -7.75 -4.97 - -9.53 -5.81 -5.88 - - -5.19 -2.46 -4.71 -4.23 -5.62 -8.48 -6.26 - -7.78 - - - -6.43 - -8.62 - - -7.22 2.91 0.34 3.52 -3.48 - -2.28 2.05 0.26 3.49 3.74 -3.28 -6.09 2.64
0.89 -1.29 0.17 -3.39 -6.03 - - - -11.74 - - -10.31 -3.31 -2.29 -1.57 -2.31 0.08 -1.06 -0.17 -1.39 -5.87 -4.08 -6.77 -5.41 -4.87 -3.77 -5.8 -6.0 -4.71 -5.84 -6.01 -7.16 -7.09 -5.48 -4.88 -7.14 -4.18 -3.8 -4.28 -3.5 -3.11 -3.84 -3.58 -3.24 -3.68 2.04 1.28 2.41 -4.79 - -4.03 1.92 1.08 1.96 4.35 -1.57 -8.03 2.86
- - - 3.66 - 1.88 0.71 0.91 1.61 0.37 -0.37 -0.65 -0.54 - - - - - - - - - - - - - - - - - - 0.16 -1.2 - 2.56 - - - - - - - - - - 0.77 - 2.19 0.73 - - - -1.54 0.64 - - - 3.85
-1.14 -0.59 -2.75 1.87 -3.67 - - - -8.34 - - - -0.35 1.31 2.77 3.77 -2.74 -1.57 -1.71 -0.93 -2.38 -0.44 0.88 -0.49 -0.32 0.3 0.59 -2.95 -3.74 -1.54 0.41 0.16 0.18 0.33 0.8 -0.63 -0.91 0.64 -1.64 0.26 0.82 0.44 0.1 0.21 0.71 -2.01 -6.93 -0.3 -1.16 - -4.48 - -1.23 -2.53 -2.3 - - -2.29
0.12 -0.12 1.64 -4.57 -4.87 - -7.94 -11.66 -10.17 - - - -0.13 -0.65 -2.33 -1.32 0.43 -0.72 1.76 2.28 -1.64 -9.21 -1.86 -1.56 -2.41 -3.64 -10.19 -0.82 -2.62 -1.55 -3.09 -2.84 -3.13 -3.67 -1.83 -4.19 -5.02 -5.02 -5.28 -4.78 -4.28 -4.28 -3.49 -5.24 -3.43 2.39 -0.19 2.33 1.82 -1.65 0.89 0.03 0.18 0.53 2.4 2.74 -0.47 1.93
-1.45 -0.4 1.95 -1.24 -3.45 - - -6.96 -8.73 - - - 0.86 2.34 2.6 2.45 0.49 -0.39 0.96 1.22 -1.16 -0.9 -0.67 -0.13 -1.3 -1.73 -1.9 -1.11 -1.2 -1.17 -3.92 -3.13 -2.94 - -3.1 -2.86 -2.11 -1.89 -2.03 -2.51 -1.03 -1.77 -3.89 - -2.14 -0.72 -0.21 3.3 0.67 -1.42 -1.05 -0.09 0.33 1.59 -2.42 -4.61 - 0.06
- - -1.07 -0.27 - - - - -4.21 - - - -0.05 -0.48 1.83 5.22 - -2.42 -0.37 1.01 - 0.54 - -3.53 - - -0.47 - -0.8 - - - - - - 0.43 - - - - - -3.08 - - -0.01 - -1.54 0.19 -0.93 - - - -0.63 -0.69 - - - 1.4
0.64 0.56 -1.37 -1.88 -3.0 - - - - - - - -1.85 0.27 -2.33 -2.86 1.17 -0.52 -0.36 0.01 -0.58 -2.2 -0.98 -0.43 -1.15 -0.9 -0.24 -0.75 -2.19 -0.18 0.47 0.44 -0.08 1.48 1.58 -2.43 -4.01 -5.3 - - - -3.95 - - -4.12 3.16 0.71 1.66 0.21 -0.53 2.68 1.82 0.88 1.26 -1.55 0.69 -2.82 -1.83
- - -0.63 -5.27 -4.36 - - - - - -7.76 -7.46 -3.87 -0.81 -3.68 -1.76 0.04 -1.71 -4.75 - - -3.89 - -7.33 -15.16 -2.44 -2.97 -5.73 - -6.06 - -6.55 -5.89 -3.48 - -4.07 -0.87 -1.79 -1.28 -1.09 -0.47 -1.63 - - -2.65 -3.75 -1.47 2.88 -2.5 - - -1.44 0.04 0.7 4.0 -0.42 - 4.57
- - - 5.08 - - - - 1.56 - - - 3.5 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 3.31 - - - - - - - - -
- - -1.48 -1.41 -0.91 - -0.85 - - - - - -3.14 -1.98 - -3.94 4.23 -0.29 -1.63 -2.23 1.87 - 0.14 0.19 0.56 - - 0.53 1.65 -0.43 - -0.57 -0.13 -0.61 - - - - - - - - - - - -1.48 - -3.21 3.8 -2.44 -1.76 - -0.08 1.09 1.1 -0.67 - -
-0.83 0.31 0.81 -1.77 -5.87 -5.81 -9.31 -9.59 -7.44 - - -11.72 0.26 -2.03 -0.75 -0.64 1.88 0.62 1.01 1.97 -2.67 -2.84 -2.32 -2.82 -3.85 -0.99 -4.33 -1.7 -1.38 -1.81 -1.07 -1.44 -1.3 0.85 0.77 0.04 -3.16 -2.06 -2.88 -2.91 -1.09 -0.67 -3.05 -2.9 0.66 2.15 -1.54 2.02 2.3 -0.3 2.54 -0.47 0.12 1.7 0.59 -0.51 -1.66 -0.5
-2.33 -2.07 -2.31 -2.83 -3.67 - -4.47 - - - - - -0.6 -0.65 -1.91 -1.3 -0.14 -2.06 -2.51 -0.83 -1.01 -1.31 0.46 -1.22 -2.2 -2.36 -0.25 -0.15 -1.55 -2.56 -3.72 -1.9 -1.15 -3.03 -1.31 -3.45 -0.67 -0.69 -0.95 -1.34 -1.24 -1.15 -0.77 -1.38 -2.15 2.89 0.88 1.47 -0.29 -0.09 1.53 2.4 0.41 2.33 3.25 0.19 -3.22 1.68
- - -1.51 1.02 - - - -0.45 -0.82 - - - -1.27 -3.92 - -2.55 2.62 0.36 0.49 - -0.44 - - -2.52 -3.84 - - - - -0.85 -2.82 -4.16 - - -0.1 - - - - - - - - - - 4.38 2.31 -1.51 -2.05 0.34 1.01 3.0 1.92 -0.43 - - - -
- -1.81 - - 0.91 1.02 1.13 0.46 0.15 0.1 0.07 0.05 -1.18 -3.25 - -3.8 -0.09 0.27 - - -2.41 - - - -2.41 - -3.27 - -0.95 -2.15 - - -1.3 0.44 1.93 -0.09 1.58 1.43 1.64 1.92 0.63 1.77 2.68 2.99 0.48 -1.12 - - -0.54 - -0.72 - -1.39 - - - - -
- - - 3.19 - - - - - - - - 1.63 - - -1.01 -0.45 - - - 0.54 - - - - 0.51 - - - - 0.81 -0.07 1.23 - - 0.49 - - - - - - 1.48 - - 2.57 - 3.17 2.08 -0.13 - -0.49 -1.49 3.49 - - - -
- - - - - - - - - - - - - - - - 4.45 - - - 1.06 - 1.1 0.42 2.13 - - - - 2.13 - - - - - - - - - - - - - - - - - 2.34 0.76 1.03 2.68 - - 2.74 - - - -
- - -4.25 2.06 -2.53 -2.94 -0.78 -1.6 -2.84 -5.23 -3.7 -3.64 -2.17 -1.96 -2.92 -2.18 -0.84 -3.3 - - -1.2 - - -2.25 -1.68 - - -0.1 0.3 -1.25 - -4.05 -2.96 - 3.01 0.08 1.81 2.3 1.88 2.06 0.55 2.09 3.12 1.18 1.35 -1.19 -1.5 - -1.88 -1.09 -2.59 - -4.01 -0.67 - - - -
0.74 1.7 0.17 -2.5 -3.58 - -1.42 -6.05 -7.73 -9.39 -9.59 - -1.22 -0.75 -2.01 -1.64 0.95 0.43 0.77 3.42 -1.99 -5.23 -1.44 -1.74 -2.71 -1.74 -3.07 -0.69 -2.29 -2.2 -1.94 -2.42 -2.27 -1.72 -0.26 -0.39 -0.5 -0.44 -0.64 -0.03 -0.71 -0.19 0.51 0.46 -0.06 0.65 -0.23 1.73 -0.48 0.85 0.71 -0.06 0.93 -0.08 1.64 0.39 0.77 -0.39
-1.26 -1.73 -0.59 -4.16 -4.74 - -6.11 - - - - - 0.13 -2.6 -3.21 -3.17 1.58 0.63 -2.81 -1.61 0.34 -1.96 -0.29 -0.27 -0.35 -1.73 -2.15 0.58 0.97 0.59 -0.73 -0.81 -1.57 -4.52 -0.67 -0.88 -2.05 -1.24 -4.32 -3.04 -0.73 -1.82 -2.09 -1.96 -2.05 2.16 -1.02 1.27 -4.89 0.41 3.28 1.51 1.68 1.22 2.02 -0.51 -0.39 1.64
-0.55 -0.36 0.36 -2.02 -5.48 - -5.07 -9.09 -8.43 - -7.71 - -1.11 -1.16 2.67 3.11 -0.88 -0.71 -4.84 -1.54 -2.01 -6.36 -2.21 -2.01 -2.13 -3.73 -3.4 -0.97 -1.42 -0.69 1.6 0.47 0.94 1.13 2.22 -1.59 -3.74 -2.27 -1.84 -2.06 -1.1 -1.83 -1.06 -1.8 -1.89 -3.74 2.61 0.0 3.33 -7.62 -7.16 -3.39 -0.01 -1.69 -6.34 -5.27 - -5.18
-0.3 0.7 0.59 -2.96 -3.57 -2.86 -1.09 -2.47 -2.62 -2.56 -2.54 -2.31 1.39 -0.28 -0.76 -0.39 -0.41 -0.41 0.04 2.08 0.21 0.78 0.7 0.29 -0.09 -0.33 0.06 0.18 -0.41 -0.35 0.26 -0.03 0.16 1.29 0.38 -0.52 -1.38 -1.5 -1.48 -0.67 -0.91 -0.69 -1.48 -0.84 -0.43 1.12 -2.44 0.88 -1.12 -0.28 1.04 -1.86 0.2 -1.08 2.09 1.05 -0.86 0.1
- - 1.63 - - - - - - - - - 0.25 0.49 3.72 4.79 - -0.19 - -2.43 -2.76 -0.21 - -4.1 -2.83 - -3.57 - - -2.5 -1.8 - -1.9 - - - - - - - - -3.26 - - - - -0.41 -0.41 2.5 - -2.81 -2.64 -0.63 -2.66 - - - -
- - - - - - - - - - - - 0.82 - - - 1.83 - 2.99 - - - - - -0.41 - - 4.22 3.34 - 0.72 -0.11 1.57 - - - 2.86 - - - - - - - - - - - - - 1.27 - - - - - - -
- - - - 2.99 - - -0.92 - - - - 1.51 - - 2.13 3.11 - - - - - - - - - - - - - - - - - - - - - - - - 1.64 - - - 2.21 - - 4.64 - - - -0.11 - - - - -
- - 1.32 -1.36 - - - -6.45 - - - - 2.32 0.06 -0.77 -0.21 1.65 0.07 - -5.57 -0.42 -2.55 -0.05 -0.71 -1.5 -1.74 -5.78 -0.15 -1.91 -0.4 -2.08 -1.88 -2.79 -1.72 - -4.25 -2.0 -3.86 -2.52 -2.31 -2.52 -4.6 -3.53 - -3.68 -0.25 0.43 0.88 -3.02 -3.15 1.11 1.16 1.23 1.54 3.18 1.8 0.4 3.08
-4.58 -7.08 -2.42 -2.94 -7.07 -7.08 -8.79 -6.86 -6.94 -10.32 -11.04 - -2.31 -0.64 2.8 3.2 -2.31 0.94 -0.68 -1.53 -8.1 -3.1 -5.19 -3.16 -4.12 -2.01 -2.81 -3.75 -2.05 -7.39 -7.66 -5.13 -3.15 - -3.8 -5.63 - -7.95 -7.0 -5.99 -4.41 -6.38 -6.37 - -6.1 -0.3 -3.51 2.3 -0.17 1.17 1.15 -6.9 -1.77 1.41 4.16 -0.3 -6.57 1.73
3.42 1.83 -1.37 -2.97 -5.18 -1.37 -6.08 -2.32 -2.27 -2.85 -2.92 -3.04 -1.42 -2.23 1.11 2.55 -2.6 -0.28 -2.18 -2.42 -2.86 0.46 -3.86 -1.13 -1.47 0.32 2.54 -4.17 -2.35 -4.1 -2.15 -2.18 -3.18 -6.27 -3.42 -5.15 0.67 0.29 0.32 0.42 -0.1 -0.24 1.06 0.26 -3.64 -1.94 -2.51 -0.67 1.95 -3.75 -4.98 -4.5 -2.17 1.07 1.25 -1.37 -1.43 -1.04
1.69 -0.14 0.33 3.36 - - - - - - - - 1.15 - - -1.98 0.36 - 1.24 2.03 - - - - - - -1.09 - -0.5 - - -1.73 - - - - - - - - - -3.05 - - - - - 3.62 3.05 - - - -0.05 0.61 -0.03 1.46 - 1.9
0.64 1.68 0.77 -0.9 0.21 -0.45 -1.0 0.3 -0.03 0.65 0.7 0.87 0.26 2.15 1.66 1.76 1.64 -0.03 -1.73 1.05 -6.38 -2.48 -7.72 -5.93 -5.13 -1.32 -5.27 -5.17 -3.85 -6.09 -4.07 -3.66 -2.5 -9.42 -0.45 0.47 -1.43 -1.08 -1.09 -0.88 -0.67 -0.45 -2.13 -1.73 0.66 -1.53 -4.88 3.01 -3.43 -9.4 -1.42 -8.56 -0.16 1.12 -1.73 -5.44 -9.9 0.95
0.39 0.23 0.61 -0.41 -3.87 - -1.51 -7.45 - - - - 0.95 1.21 2.83 2.59 -0.99 0.46 -0.7 -1.49 -1.63 -1.26 -1.12 -1.79 -2.35 -1.23 0.55 -0.29 -1.83 -0.48 -0.98 -0.81 -1.94 0.33 -1.85 -2.03 0.07 -0.04 0.2 -0.0 0.2 0.25 0.82 -0.34 -0.61 -2.98 -1.11 -2.08 -2.47 0.78 2.83 -0.37 -0.86 -2.28 -1.21 -0.52 0.39 -0.77
- - - - - - - - - - - - - - - - 4.05 - - - - - -2.09 -1.1 0.48 - - - - - 2.14 1.66 - - - - - - - 2.43 - -1.37 2.72 - - - - 2.76 3.4 - - - - - - - 1.08 -
0.99 3.05 0.94 -2.94 -2.04 - -1.59 - -5.29 - - - 0.32 -3.9 - -4.1 -3.02 -2.89 3.21 0.73 -1.1 -0.05 -2.03 -0.02 -1.11 2.43 -1.47 0.36 0.72 0.72 2.43 1.49 1.29 -0.15 0.55 0.26 -0.99 -1.9 - -1.33 - -4.36 0.04 - -0.11 - - - 0.24 - - - -2.2 - -2.44 - -2.74 -
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Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.