Heatmap: Cluster_257 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Ovary
Microspore
Generative cell
Pollen
Sperm cell
Pollen grain
Pollen tube
Pollen tube (1.5h)
Pollen tube (3h)
Pollen tube (9h)
Pistil
Style (before flowering)
Style (after flowering)
Style (pollinated, after flowering)
Flower (buds)
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Pericarp/Exocarp (4 DPA)
Pericarp
Pericarp (5 DPA)
Pericarp (7 DPA)
Pericarp (10 DPA)
Fruit (mature green)
Fruit (breaker stage)
Septum (7 DPA)
Septum (10 DPA)
Septum/Seed (4 DPA)
Seed (5 DPA)
Seed (7 DPA)
Seed (10 DPA)
Seeds (10 DPA)
Seeds (20 DPA)
Seeds (30 DPA)
Seeds (Pk-stem)
Seeds (Br-stem)
Seeds (Pk-equatorial)
Seeds (Pk-stylar)
Seeds (Br-stylar)
Seeds
Seeds (RR)
Seeds (LR)
Seeds (MG-equatorial)
Hypocotyl
Seedling (leaves)
Seedling (roots)
Callus
Meristem (vegetative)
Meristem
Apical meristem
Leaf
Root
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root hair cells
- - - - -3.6 - - - - - - - - -7.73 - - - -3.75 - - 0.47 - -5.39 -1.44 -1.07 - - 0.37 -0.84 2.0 -2.65 2.88 3.55 4.71 -3.6 - - -4.17 -2.21 - - -5.5 -2.22 - - - - - -1.28 - - - -4.62 1.72 - - - -
- -9.32 -9.96 -3.94 -8.94 - - - - - - - -6.53 -6.08 -10.35 -8.91 -4.97 - - - -0.84 -3.81 -2.57 -1.44 -0.75 -3.51 - -0.23 -0.08 0.68 1.6 2.33 3.53 -2.26 4.79 1.89 - -6.87 -6.87 -5.57 - -1.88 -5.52 -6.83 0.2 - - - -9.04 - - -9.84 -10.8 - - -8.28 - -
-4.08 -3.56 -2.42 -2.15 0.92 -1.25 0.07 -2.78 -2.19 -1.67 -1.84 -1.77 -1.88 0.36 0.59 0.63 -2.28 -2.49 -5.68 -4.42 -0.54 - -2.46 -1.2 -0.32 -5.65 - -0.77 0.79 0.33 0.79 2.08 3.33 1.56 4.5 -4.86 - - - - -6.24 -7.85 - - - -6.16 -9.44 -6.28 -4.84 -3.19 -2.87 -5.41 -6.31 -7.45 -6.24 -4.63 -5.92 -
- - - 0.28 -3.07 - - -0.78 -0.85 - - - -3.27 -2.47 -3.49 -3.44 - -4.3 - - 0.02 - - -0.53 0.13 -4.0 -3.69 0.29 1.53 1.1 -2.66 1.58 3.38 4.07 3.69 -0.45 - -1.46 -0.98 - - -4.8 - - - - -2.13 - -0.99 - - -3.95 -2.58 - - - - -
- - - -0.62 -0.59 - - - -6.5 - - - -4.52 - - - - -3.21 - - 0.02 - - -1.86 -0.93 - - -2.05 1.21 1.4 -2.92 1.83 3.34 4.16 4.03 -1.32 - - - - - -5.05 - - - - -1.2 - -0.82 - - - -4.49 - - - - -
- - - - - - -2.56 - - - - - -3.68 - - - - - - - 1.27 - - -2.09 0.15 - - -1.76 0.96 1.41 -1.11 2.01 3.18 4.03 4.2 -1.77 - - - - - -4.85 - - - - - - -1.28 - - - -4.21 - - - - -
- - - 1.95 -2.57 - -0.95 - -3.13 - - - -1.6 - -4.08 - -2.42 - - - -2.23 - -2.1 -2.13 -0.52 - - -1.06 -0.06 -0.18 2.49 1.31 2.63 2.7 4.78 -2.29 - - - - - - - - - - - - -1.95 - - - -4.9 -1.97 - - - -
- - -2.61 -0.33 - - - -6.15 - - - - -3.73 - - - 0.35 - - - -1.04 - - -1.33 -1.03 - -3.7 0.18 -0.24 1.11 -1.42 2.43 3.4 4.97 0.04 - - - - - - - - - - -0.84 - - -3.91 - -2.75 -1.51 -4.38 -2.87 - -2.74 - -
-6.52 -2.68 -5.83 -2.7 -1.82 -7.79 -4.47 -6.12 -7.72 -8.85 -8.63 -9.51 -4.4 -6.12 -4.31 -5.43 -4.18 -6.58 -5.64 -4.73 -1.02 - -1.61 -1.6 -0.17 -9.61 - 0.4 0.94 0.72 2.81 1.6 3.22 1.15 4.72 -3.28 -6.79 -5.82 -5.69 -6.57 - -6.24 -4.97 - - -6.27 -7.4 -0.35 -4.45 -2.8 -1.67 -6.3 -3.75 -2.05 -7.49 -7.27 -5.16 -1.97
-4.0 -3.97 -3.98 0.74 -1.53 - -3.35 - -9.52 - - - -3.66 -6.53 -6.23 -5.75 -3.95 -3.38 -3.18 -5.32 -0.75 -2.43 -6.58 -1.51 -0.36 -3.54 -6.71 -0.64 0.94 1.18 -2.53 2.34 3.23 0.02 4.61 2.72 -3.68 -5.32 - -5.68 -4.17 -3.0 -5.18 - -0.28 -5.0 -8.37 -7.97 -2.14 -3.09 -3.68 -7.14 -4.45 -5.36 -5.66 -5.16 -3.85 -
- -2.2 -4.07 - 1.17 - -1.92 -6.75 -4.17 - - - - - - - - -4.28 - - -0.43 - -4.18 -1.01 -0.99 - - -0.01 -0.05 -0.0 0.73 2.07 3.14 4.83 2.75 - - - - - - - - - -1.91 - - - -1.7 - - - - - - - - -
- - -5.98 -5.79 -4.81 - - - - -7.1 -6.07 - - - - - -5.74 -7.47 - - -0.92 - - -2.14 -0.34 -5.06 - -1.67 0.28 -0.04 -2.64 1.57 3.84 1.24 4.84 2.04 - -3.85 -2.81 -1.91 -1.81 -3.25 -2.81 - -2.38 - - - -3.37 - - - -6.53 -5.52 - - - -
- - - - 2.47 - 0.88 -5.38 -4.14 - - - - - -4.12 - - - - - -0.41 - -1.92 -1.27 -0.45 -2.63 - 0.02 0.69 1.36 0.56 2.1 3.13 3.43 3.42 -1.81 0.42 -0.1 - -0.9 0.62 -1.01 0.43 - -1.34 - - - -3.93 - - - - - - - - -
- -1.08 - 1.45 1.76 - -2.3 - -4.03 - -4.15 - -2.2 -2.54 -3.15 -4.67 - - - - -0.33 - - -1.93 -1.33 - - -3.02 -1.11 -1.9 -3.01 0.05 3.29 3.87 3.99 - - -1.98 0.36 -0.22 0.36 -1.04 0.36 - - -0.56 - - -0.59 - - - -5.99 - - - - -
- - - - - - - - - - - - -5.74 -8.45 - - - - - - -0.35 - -4.23 -1.51 -1.19 - -9.05 -0.03 -0.8 1.11 0.1 2.76 3.11 5.03 1.76 - - - - - - -10.86 - - - - - -7.07 -7.89 - - - -14.47 - - - - -6.21
- - - - - -0.56 - -1.68 -2.21 - - - - - - - -2.07 - - - -0.15 - - -1.66 0.05 - - 0.48 1.46 -1.83 0.17 2.67 4.02 0.73 4.56 - - - - - - -2.55 - - - - - - -1.17 - - - -1.93 - - - - -
-6.51 - - -5.3 -4.94 - -5.69 - - - - - -5.15 -0.59 -2.89 -3.89 -2.53 -5.4 - -6.72 -0.34 - - -0.95 0.28 -6.92 - -0.97 1.71 1.13 -4.73 1.81 3.82 2.07 4.28 -0.18 - - - - - -8.66 - - -4.86 -0.64 -3.45 1.55 -5.65 -7.39 -3.31 -3.11 -3.56 -0.53 -0.63 -1.49 -1.76 -6.45
- - - 1.21 - - - -0.43 -1.87 - - - - -3.16 - -3.62 - - - - -1.92 - -3.08 -2.39 -1.3 - - -2.53 1.0 -0.21 0.59 2.3 2.28 2.14 5.11 - - - - - - - - - - - - - -2.36 - - - -6.83 - - - - -
-6.67 - - - -7.6 - - - -10.18 - - - -9.08 - - - - -10.0 - - -0.71 -6.54 -6.69 -1.2 0.36 -4.3 - -0.73 1.31 0.46 -2.01 2.22 4.15 2.04 4.53 -0.47 -4.23 -6.65 -5.51 -4.06 -4.52 -3.07 -6.52 - -2.27 - - -7.69 -6.27 - - - -10.8 - - - - -
- - - - -2.62 - - - - - - - -4.1 - - - - - - - -0.4 - - -2.25 -2.05 - - -0.8 -0.17 0.38 0.87 1.87 2.66 3.79 4.38 - 1.56 - - 0.82 - -0.42 -1.4 - 0.41 - - - -2.71 - - - -8.5 - - - - -
- - - - -3.56 - - -0.56 -1.21 -2.13 -1.46 -1.83 - -6.13 - -5.99 - -3.33 - - -0.25 - - -0.83 -1.14 - - 0.15 0.49 1.34 -0.66 2.25 3.67 1.63 4.78 -3.22 - - - - - -6.19 - - - - - - -3.67 - - - -6.58 - - - - -
-6.93 - - -4.73 - - - -8.12 - - - - -5.69 -8.95 -7.78 - -7.54 -7.1 - - 0.16 - -5.65 -0.52 1.1 - -6.03 -0.63 2.51 0.8 -2.99 1.71 4.2 2.55 4.04 0.37 -4.39 -5.35 -4.32 -5.96 -4.32 -5.25 - - -3.11 -7.91 -5.4 - -5.27 - - -6.24 -4.56 - - - - -
- - -6.32 - - - - -5.8 -6.5 - -6.78 -7.62 -4.05 - -6.89 - -6.37 - - - -0.43 - - -1.37 0.39 - - -0.28 1.61 0.6 -1.49 2.01 3.54 3.47 4.51 -3.49 - - - - - - - - - - - - -5.91 - - - - - - - - -5.71
- - - -0.12 - - - - - - - - 1.71 - - - - - - - -0.63 - - -1.32 -0.63 - - -0.21 1.19 0.62 -1.94 1.64 3.4 3.28 4.56 - - - - - - - - - - - - - -3.24 - - - -4.24 - - - - -
- - - 1.03 - - - -2.27 -4.31 -1.57 -2.26 -1.48 -2.46 - - - - - - - -2.81 - -1.19 -1.85 -0.54 - - -0.23 0.96 -1.22 2.6 2.02 1.73 1.92 4.99 - - - - - - - - - - - - - -1.73 - - - -4.62 -3.35 - - - -1.03
- - -5.63 - -0.97 - -3.39 - - - - - -5.79 - - -6.68 - -4.52 -2.59 -4.99 -0.03 - -4.3 -1.64 -2.0 - - -0.85 -1.04 0.96 0.2 2.37 3.23 5.15 -0.15 -3.99 - -4.34 - - - -6.08 - - - -5.48 -3.95 - -2.08 - - - -4.87 - - - - -
- -4.27 -4.88 -5.31 -4.36 -6.47 -4.37 -4.24 -4.86 -6.54 -5.51 -6.34 - - - -7.62 -0.12 -4.5 - - -0.88 - -6.71 -1.82 -0.25 - - -1.9 0.98 0.14 -1.52 0.71 3.43 4.31 4.24 -2.87 - - - - - -6.25 - - - - - - -5.79 - - - - - - - - -
- - - - - - - - -8.61 - - - - - - - - - - - -0.47 - -4.76 -1.42 -0.53 - - 0.01 0.76 1.1 -0.35 2.78 3.76 -1.71 4.88 -3.35 - - - - - -8.41 - - - - -7.08 -1.93 - - - - -6.12 -4.99 - - - -
- - - -5.36 - - - - -9.32 - - - -6.29 - - -8.23 -2.88 -2.3 - - -0.29 - -4.41 -1.41 -0.35 -6.55 -3.87 0.07 0.33 1.26 0.43 2.38 2.91 3.53 4.54 -6.32 - - - - - -9.13 - - - -1.93 -3.42 -7.39 -4.53 - - -4.85 -6.62 -4.39 - - -2.41 0.34
- -0.03 - -2.3 -1.92 - - -6.87 - - - - - - - - - - - - -1.96 - -1.65 -2.05 -0.94 - - 0.55 -0.76 0.9 2.82 2.18 2.07 - 5.12 -2.64 - - - - - - - - - - - - -1.63 - - - -4.31 - - - -3.66 -
- -4.77 - -6.65 -8.07 - - -12.65 - - - - -9.02 - - - -8.97 -12.32 - - -1.6 - -2.35 -2.07 -1.7 -9.24 - -0.88 -1.67 -0.02 1.58 1.88 3.01 4.55 2.8 -2.59 - - - - -6.65 -5.89 - - -6.71 -7.47 - -0.85 -5.17 - - -9.57 -11.0 0.5 -5.91 -0.55 1.9 1.75
- -9.38 -8.27 -7.75 - - - - - - - - -9.28 - - - - -10.56 - - -0.8 -6.6 -4.96 -1.45 -0.04 -7.74 -8.79 -1.03 1.18 0.17 -0.6 2.03 4.03 1.75 4.79 -4.56 - - - -8.36 -6.72 -8.55 -7.72 - - - - - -6.81 - - - -8.95 - - - - -
- -3.47 - - -2.11 - - -7.02 - - - - -3.59 - - - -3.11 - - - -2.14 - -3.01 -1.24 0.43 - - -1.0 0.65 -0.59 1.89 1.33 4.19 -1.22 4.75 - - - - -2.67 - -5.43 - - - - - - -0.78 - - - -6.93 - - - - -
- -4.46 -5.27 2.03 -3.87 - -5.52 - - - - - -4.95 - - - -4.64 - - - -1.8 - -5.1 -2.96 -0.85 - -4.73 -3.19 0.62 -0.92 -1.4 0.26 2.48 1.46 5.31 -1.23 - -3.89 - -4.51 - -4.45 -2.87 - - - - -6.66 -4.62 - - - -7.3 -4.04 -5.35 - - -
- - - -3.52 -4.26 - -0.83 - - - - - -7.79 -7.12 -8.55 -6.38 -8.74 -9.37 - - -0.85 - -3.75 -1.7 -0.27 -3.84 - -0.4 0.77 0.88 0.36 2.35 3.03 2.41 4.92 -1.68 - -7.75 - - -5.81 -5.39 - - -4.04 -7.18 -10.08 -3.37 -7.24 -9.41 - - -4.79 -4.3 - -8.06 -7.48 -1.62
- - -5.43 -1.46 - - - - - - - - -3.46 -2.47 -3.48 -4.56 - - - - -0.84 - -3.29 -1.52 -0.52 -6.65 - -0.05 0.32 1.34 1.29 2.45 2.97 1.22 5.02 -3.44 - - - - - -9.29 - - - - - - -5.38 - - - -7.86 -6.62 - - - -
-8.35 - - -6.73 - - - - -9.31 -11.62 -10.55 -9.04 -9.52 -9.14 -9.77 -10.01 -8.81 -8.2 - - -0.36 -7.35 -9.11 -1.34 0.15 -4.77 -7.62 -1.08 1.46 0.38 -3.51 1.65 3.82 1.44 4.65 2.24 -4.38 -4.18 -4.15 -4.21 -4.32 -3.45 -4.21 -3.28 -0.73 - -10.5 - -6.59 - - -6.15 -5.48 - - - - -
- - -10.54 -5.28 -7.18 -9.92 - -7.8 -7.25 -11.04 -8.25 -9.74 -8.07 -7.9 -7.28 -8.81 -4.39 -3.23 - - -0.74 -4.59 -6.89 -1.5 0.3 -3.66 -8.19 -1.53 1.44 0.0 -2.54 1.55 3.66 0.68 4.68 2.27 -2.34 -1.72 -1.69 -2.09 -1.65 -1.78 -2.09 -2.31 0.08 -3.57 -6.62 -10.54 -6.4 - -8.88 -4.21 -1.69 -9.53 - - - -
-8.42 - -9.77 -3.79 - - - - - - - - - -6.88 -9.28 -9.1 -1.88 -9.86 - - -0.5 - -4.83 -1.68 -1.56 -8.83 - -0.08 0.14 1.02 -0.95 2.03 3.23 4.98 2.71 -5.35 - - - - - -10.89 - - - - - - - - - - -11.53 -8.8 - - - -
- - - -1.83 - -7.18 - - - - - - -7.9 -7.95 - - -5.28 -7.61 - - -0.59 - -2.95 -1.54 -0.77 - - 0.19 0.62 0.71 0.73 2.13 3.57 2.49 4.8 -3.44 -5.04 - - - - -8.32 - - - -5.4 -8.35 -6.14 -5.42 - -6.59 - -5.32 - - - - -
- -4.69 - -2.64 -4.77 -6.91 -2.51 -7.66 -6.57 - - - -5.37 -6.53 - - -5.95 -6.57 - - -0.23 - -3.38 -1.62 -1.05 - - 0.2 0.26 1.26 1.03 2.33 2.99 4.26 4.06 -3.23 - - - - - - - - - - - -5.87 -5.89 - - - -8.88 -6.45 - - - -
- -6.75 - -7.21 - - - - - - - - -7.72 - - - - - - - -0.06 - -5.4 -1.59 -0.64 - - -0.3 1.41 1.06 -1.82 1.77 3.28 4.62 3.53 -2.09 - -3.17 - - -1.84 -3.82 - - -2.87 - - - -5.91 - - - - -6.99 - - - -
- - - 1.09 1.77 - 0.58 -3.2 -3.85 - - - -0.87 - - - -2.14 - - - -0.99 - - -1.31 -1.87 -2.41 - - 0.75 -1.89 - -0.0 3.46 2.89 4.72 - - - - - - - - - - -0.75 - - -1.25 - - - -5.97 - - - - -
-2.68 -2.26 -6.12 - -11.19 - - -13.6 - - - - -10.27 -10.84 - - -11.83 -11.26 -5.4 -2.73 -2.38 - -3.05 -2.71 -1.56 -4.84 -8.39 -1.47 -0.75 -0.33 1.07 1.81 1.63 1.86 5.39 -1.08 - -8.92 - -10.56 -7.6 -6.97 -7.56 -7.56 -6.39 - - -7.19 -8.94 -10.21 -12.33 - -10.62 -6.31 - - - -
- - -4.0 -3.32 - - -0.73 -3.97 -5.28 - - - -4.94 -5.3 - - - -5.04 - - -3.83 - - -1.59 -2.99 - -4.99 -1.54 -0.62 -0.85 -3.08 -0.76 2.54 - 5.39 1.61 0.07 -0.98 - -1.76 -3.21 -1.33 -0.51 - -15.93 - - -3.24 -2.11 - - - -4.94 - - -4.04 - -
- - - -1.62 - - - - - - - - - - - - - - - - -0.85 - -3.94 -1.78 -0.25 -8.23 -9.12 -0.51 1.08 0.39 0.68 2.2 3.47 2.64 4.8 -3.52 - -4.34 -5.21 -4.04 -5.21 -4.97 -5.14 - -4.78 - - - -7.38 - - - -11.12 -8.2 - - - -
- - - - - - - - - - - - - -5.85 -7.88 - - - - - 0.02 - - -0.79 0.95 - - -1.23 2.18 0.75 -5.3 1.33 3.65 4.11 3.74 0.99 - - - - - -5.17 - - - - - - -4.3 - - - -4.73 - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 5.86 - - - - - - - - - - - - - - - - - - - - - - -
2.21 1.17 -1.53 0.23 -5.16 - -4.22 -6.88 -8.67 - - - 0.07 -1.1 -2.69 -2.17 -3.89 -4.94 -4.67 -4.26 -0.43 - -2.61 -1.49 -0.7 -1.9 -6.42 -0.35 0.21 0.95 0.36 1.95 3.19 1.82 3.95 0.62 - - - - - -7.03 - - - - - -3.59 2.22 - - -4.39 -6.88 -5.04 -1.54 -0.35 -2.84 -1.07
- -6.58 -7.3 -3.17 -5.05 -3.63 -5.64 -4.57 -4.6 -4.55 -4.35 -4.98 -6.18 -8.28 -8.07 -7.62 -4.44 - -5.5 - 0.49 - -3.97 -0.75 -0.93 - - 0.55 -0.43 2.03 0.42 2.89 2.8 4.95 0.87 -5.75 - - - - - - - - -5.14 - - -6.12 -7.74 - - - -10.68 - -5.23 - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.