Heatmap: Cluster_190 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Ovary
Microspore
Generative cell
Pollen
Sperm cell
Pollen grain
Pollen tube
Pollen tube (1.5h)
Pollen tube (3h)
Pollen tube (9h)
Pistil
Style (before flowering)
Style (after flowering)
Style (pollinated, after flowering)
Flower (buds)
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Pericarp/Exocarp (4 DPA)
Pericarp
Pericarp (5 DPA)
Pericarp (7 DPA)
Pericarp (10 DPA)
Fruit (mature green)
Fruit (breaker stage)
Septum (7 DPA)
Septum (10 DPA)
Septum/Seed (4 DPA)
Seed (5 DPA)
Seed (7 DPA)
Seed (10 DPA)
Seeds (10 DPA)
Seeds (20 DPA)
Seeds (30 DPA)
Seeds (Pk-stem)
Seeds (Br-stem)
Seeds (Pk-equatorial)
Seeds (Pk-stylar)
Seeds (Br-stylar)
Seeds
Seeds (RR)
Seeds (LR)
Seeds (MG-equatorial)
Hypocotyl
Seedling (leaves)
Seedling (roots)
Callus
Meristem (vegetative)
Meristem
Apical meristem
Leaf
Root
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root hair cells
-3.44 -9.83 -3.9 - -3.92 - -2.12 -1.8 -1.89 -5.29 -4.95 -5.1 -5.9 -4.12 - -3.99 - - - - -2.9 - -4.97 -3.05 -3.56 -4.22 - -4.98 - -4.06 -7.19 -1.35 2.46 5.16 3.18 0.57 -0.71 0.03 -0.5 -3.2 -1.28 -0.59 -2.35 - -1.29 - -6.0 - - - - - -7.72 - - - - -
-0.01 - - -0.26 - - 2.15 - - - - - 0.22 - - - - - - - -0.47 - - 0.76 0.52 - - - 1.97 0.01 1.5 2.03 3.53 - 4.28 - - - - - - -2.25 - - - - - - 1.85 - - - - - - - - -
-6.12 -8.75 -7.52 -4.9 -6.23 - -5.39 - -11.51 - - - -5.2 -5.56 -9.36 -8.79 -7.1 -8.98 - - -1.75 -4.68 -3.58 -2.19 -1.69 -4.15 - -1.08 -1.0 -0.41 0.64 1.32 2.38 4.14 3.09 1.69 -6.22 -8.1 -5.15 -5.63 -5.16 -1.52 -7.16 - 0.14 -6.8 - -1.01 -7.1 - -8.75 - -9.99 -1.55 -1.05 3.49 -8.77 1.27
- - - -7.5 - - - - - - - - - -8.19 - -9.19 - - - - -2.66 - -4.93 -3.11 -2.56 - - -1.88 -1.12 -0.75 -1.24 0.89 1.83 5.32 3.36 -2.87 - - - - - - - - - - - - - - - - - - - - - -
- - - - -3.16 - - -6.46 -4.96 - - - -4.98 - - - - -4.68 - - -3.66 -1.69 - -2.19 -0.92 -2.05 - -1.76 0.43 -0.43 -1.46 0.72 2.86 4.48 3.74 1.69 -1.17 -0.14 -1.08 -0.87 0.51 -0.25 - - 0.17 - - - -3.25 - - - -5.3 - - - - -
- - -0.06 - 3.27 - 2.87 - - - - - - - - - - - - - -0.07 - - - 0.39 - - - 2.02 - - 0.9 1.82 - 4.71 - - - - - - - - - - - - - 0.27 - - 0.06 - - - - - -
- - - - - - - - - - - - - - - - - - - - 0.71 - - -1.21 -2.8 - - - -0.23 0.17 -1.17 1.32 3.53 2.26 5.02 - 0.36 -0.52 - - - - - - - - - - - - - - - - - - - -
- - - - - - - - -3.43 - - - - - - - - - - - -1.0 - - 0.9 0.73 - - -0.17 1.8 0.34 -2.19 0.54 3.28 2.68 4.7 - 0.84 - - - - -2.43 - - - - - - 1.22 - - - -3.36 - - - - -
- - - - -2.34 - - - - - - - -3.82 - - - - - - - -0.22 - - -1.55 -1.7 - - -0.66 -0.8 -0.14 - 1.6 2.8 4.95 3.61 -2.04 - - - - - -4.75 - - - - - - -0.74 - - - -6.48 - - - - -
- -1.35 - -4.38 -1.89 - -3.03 -3.91 -4.07 -1.68 -1.79 -1.76 -2.48 - - -5.72 - -4.35 - - 0.62 -1.32 -3.23 -0.64 0.4 -0.39 -2.46 -0.08 1.27 1.32 1.8 2.98 4.51 2.73 -0.23 -1.16 - - - - -0.39 -2.75 - - - -2.59 -4.37 -3.53 - - - - -5.03 0.75 -3.59 - - -
- -1.3 - -4.28 -1.73 - -2.93 -3.81 -3.98 -1.58 -1.69 -1.67 - - - -5.62 - -5.96 - - 0.48 -0.58 -1.98 -0.69 0.07 1.61 -2.0 -0.69 1.25 1.29 1.7 2.9 4.62 - -0.13 - -1.39 0.49 - -1.94 - -1.12 -1.15 - 0.27 -2.5 - -3.43 -0.46 - - - -5.15 0.85 -3.49 - - -
-0.34 -2.3 -0.61 2.23 1.22 - 0.54 -3.14 -3.45 - -3.43 -3.53 -2.03 - - -4.74 -1.12 -2.68 - -2.53 -1.42 - - -3.0 -0.63 -0.18 - -0.65 -0.8 -0.77 0.46 1.13 1.86 3.56 4.19 1.31 - - - - - -2.03 - 0.33 - - - - -0.65 -3.2 -1.3 - -1.61 - - - - -
-4.67 -4.9 -1.18 - -4.31 - - -8.3 - - - - - - - - - -1.09 0.91 -1.77 -2.29 - -3.35 -0.87 -0.71 -2.1 -4.85 -1.52 -1.23 -0.1 -1.54 2.51 4.64 0.08 3.02 2.82 - -4.65 -2.31 -1.5 -2.31 -2.8 - -2.27 -1.31 - -6.3 -1.1 -3.74 - - - 0.93 -3.3 - - - -4.87
-2.54 -4.25 -3.97 -4.64 - - - - - - - - -0.65 -4.6 -4.15 -5.4 -4.7 -2.1 -3.84 -0.88 -0.5 -5.23 -1.81 -1.21 0.73 -4.87 -6.52 -0.37 1.56 0.88 0.88 2.38 3.48 1.09 4.71 -4.39 - - - - - -6.96 - - - - - - -4.79 -2.0 -1.23 - -6.65 - - - - -
- - - - - - - - - - - - 2.58 - - - - - - - - - - 0.25 -0.19 - - 1.38 0.19 2.31 2.03 2.75 3.56 3.68 - - - - - - - -1.62 - - - - - - 2.45 - - - - - - - - -
- - - 1.35 -3.0 - - -6.99 - - -4.28 -5.28 -1.89 - - -4.99 -2.74 - - - -1.23 - -4.42 -2.64 0.82 -3.92 - -1.49 2.3 -0.57 -4.75 0.51 3.49 2.39 4.51 1.87 - - - -1.37 - -3.15 -1.86 -0.96 -0.96 - - - -1.95 - - - - - - - - -
- - - - -5.01 - - - - - - - -2.25 -3.83 - - -5.58 -5.08 - - -2.51 - -6.11 -2.21 0.91 - - -3.22 2.63 -2.31 - -1.05 3.55 2.53 4.93 -3.72 - - - - - - - - - - -6.1 -3.89 -6.7 - - -4.05 -5.5 -3.72 - - - -
- - - - - - - - - - - - - - - - - - - - -0.86 - - -1.76 0.62 -5.09 - -1.62 2.15 -0.95 -4.45 0.69 4.32 3.16 4.3 -5.11 - - - - - - - - - - - - - - - - - - - - - -
-3.71 - -2.17 -1.36 - - - - - - - - 0.48 -3.43 -4.3 -3.29 -3.11 -4.67 - - -1.97 - -5.42 -2.72 -0.84 - -3.04 -1.07 0.69 -0.63 -0.17 0.36 2.2 4.22 4.64 -2.16 - - - - - -4.19 - - - - -6.64 - -1.38 -4.96 -5.5 -5.32 -5.12 -4.18 - -1.47 -3.52 -
- - -3.37 -3.59 - - - - - - - - -1.82 - - - - -6.96 - - -1.29 - - -2.32 -0.86 - - -2.45 0.21 -1.37 -2.85 1.48 3.95 3.74 4.51 - - - - -4.56 - - - - - - - - - - - - - - - - - -
-2.53 -0.43 -2.63 -7.44 -6.53 - - -5.84 -7.94 - - - -0.68 -6.17 -3.64 -2.42 -5.93 -3.3 - - -2.44 - -2.62 -2.4 -2.29 - - -0.93 -2.08 -0.46 1.67 1.95 1.36 5.23 2.71 - - - - - - - - - - -7.33 -7.59 - -8.22 - - -4.7 -5.18 - - - - -
- - - - - - - - - - - - -8.21 - - - -5.12 -7.1 - - -0.76 - -5.24 -1.88 -0.42 -6.22 -8.55 -1.94 1.25 -0.09 -3.76 1.36 3.28 3.71 4.75 -4.88 - - - - - - - - - - -8.92 - -7.39 - - -7.24 -5.85 -5.4 -6.89 -2.11 - -
- -2.04 -6.71 -2.82 - - - - - - - - -3.44 - - - -5.04 -4.65 - -6.22 -2.28 - -4.46 -2.16 -1.99 -5.65 - -1.62 -1.46 -0.43 0.17 1.27 2.15 4.08 3.91 1.45 - -3.15 - - -3.4 -1.79 - - 0.15 - - -3.14 - - - - -6.87 -2.59 -4.62 -0.16 3.23 -1.23
- - - - - - - - -9.09 - - - - - - - - - -5.25 - -1.62 - -7.15 -2.62 -2.08 - - -1.32 -0.5 -0.32 -2.48 1.03 2.3 5.19 3.55 - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - 0.29 - - -2.01 -2.63 - - - -2.32 0.6 - 0.94 3.2 5.2 1.83 - - -0.35 - - - - - - - - - - 0.94 - -1.51 - -5.21 - - - - -
- - - -1.08 1.43 - - - - - - - -0.3 - - - - - - - 0.25 - - -2.59 -1.14 - - -0.58 -2.05 -0.93 - 1.38 2.75 5.21 1.1 - - -0.08 - - - - - - - - - - 0.41 - - - -5.9 - - - - -
- - -3.03 0.18 -0.7 - - - -4.98 - - - -0.92 - - - - - - - - - - -4.35 -1.55 - - - -3.31 - - -3.07 -1.3 - 5.59 -1.61 - - - 0.37 - -0.21 - - -0.78 -2.87 -2.88 0.89 -0.79 - - - -3.99 -1.02 - - - -
- - - -7.57 - - - - -11.66 - - - -7.59 -4.55 -9.66 -8.3 - - - - -0.9 - -3.67 -1.71 -0.75 -9.17 -9.41 -0.43 0.48 0.27 0.65 2.01 3.03 4.63 3.85 -3.36 - - - - - -8.31 - - -6.31 - - - -9.69 - - - -11.81 - - - - -
- - - - - - - - - - - - -10.77 - - - - - - - -2.02 - -6.29 -2.82 -1.63 - -11.1 -2.05 -0.09 -1.41 -2.17 0.62 2.36 5.13 3.78 -6.05 - - - - - -12.51 - - - - - - - - - - - - - - - -
- -4.8 -4.71 -0.36 - - - - -7.54 - - - - - - -7.53 - -7.87 - - 0.07 - -1.89 -1.19 -0.12 - - 1.08 -0.27 1.01 2.52 3.07 3.32 4.57 0.71 - - - - - - - - - - - - - - - - - -8.12 -6.2 - - - -
-8.19 -4.42 -6.24 -10.4 -10.76 - - - -15.03 -14.32 - - -7.84 - -13.21 - -8.89 -4.56 -10.91 -12.52 -3.47 -10.04 -4.36 -3.85 -3.38 1.34 -7.85 -2.86 -2.88 -2.08 -0.29 0.02 0.91 5.07 2.89 2.31 -6.01 -6.94 -4.89 -5.53 -3.84 0.13 -6.16 -4.65 1.85 -12.95 -6.68 -6.44 -8.58 - - -8.07 -7.4 -7.35 - - - -6.25
- - - - - - - - - - - - -5.85 - - - - -7.6 - - -4.89 - -4.45 -5.54 -1.47 - - -6.5 -0.18 - -2.46 -2.86 2.29 1.59 5.59 -4.0 - - - - - - - - - - - - - - - - -11.08 - - - - -
- - - -2.65 - - - - - - - - -3.77 - - - - - - - -2.43 - -6.1 -3.98 0.02 - - -4.27 1.45 -3.89 -2.36 -0.25 2.81 1.43 5.42 -3.68 - - - - - - - - - - - -6.63 -5.58 - - - - - - - - -
- - - -7.47 - - - - - - - - -5.02 -7.96 -6.23 -7.97 - - - - -1.67 - -4.12 -2.37 -1.7 - - -2.01 -0.27 -1.08 -0.24 1.43 2.81 5.13 3.31 -5.36 - - - - - - - - - - - - -6.66 -5.29 - - -10.4 - - -7.06 -7.1 -
- - - -4.97 - -4.6 - -3.76 -5.81 -7.26 - -5.32 - - - - - -6.3 - - 0.2 - -5.06 -0.22 -1.02 - - 0.07 0.27 1.81 -1.28 3.39 3.61 4.53 1.69 - - - - - - - - - - - - - -5.74 - - - - - - - - -
- - - - - - -10.44 - - - - - - - - - - - - - -1.66 - -5.23 -2.31 -1.7 -10.7 - -1.48 -0.47 -0.33 -0.78 1.27 2.53 5.27 2.98 -6.8 - - - - - -13.1 - - - - - - -9.95 - - - -12.66 - -10.27 - - -
-0.57 - -2.38 0.74 -0.15 - - -4.07 - - - - -1.8 -2.54 - - - - - - -1.15 - - -0.19 - - - - 1.19 -0.46 - 1.04 1.99 2.4 4.98 0.15 - - - 0.28 - -2.29 0.07 - - - - - 1.12 -1.77 -2.22 - -2.56 - - -1.65 - -
- - - 1.31 - - - - - - - - 1.39 -3.54 - - - - - - -1.54 - - -1.54 0.71 -1.18 -1.25 -2.59 1.83 -0.72 - -0.56 3.11 3.4 4.27 -1.21 - - - - - -1.74 - - - -2.14 - -0.35 1.77 - -0.81 - -3.41 - - - -1.83 -
- - - - - - - - - - - - - - - - - - - - - - - -2.08 0.33 - - - - 0.28 - 1.89 3.47 - 5.29 - - - - - - -1.95 - - - - - - -0.72 -0.93 - - -4.81 - - - - -
-2.09 - - -2.71 -1.82 - - -3.54 -5.09 - - - -3.3 - - - - -3.34 - - -2.09 - -1.82 - 0.02 - -3.64 - 0.93 -2.48 - 0.13 3.49 2.65 4.95 0.1 - - 0.27 - - -3.65 - - - - - -3.53 -0.17 - -1.88 - -3.21 - - - - -
-3.65 - -6.39 1.74 -4.06 -4.91 - -8.42 - -6.45 - - -2.56 -6.31 -5.63 -6.96 - -1.42 - -4.15 0.13 - -5.84 -0.7 -0.11 - -5.02 -1.24 1.3 -0.15 -0.85 2.35 4.61 3.31 2.63 - - -4.38 - - - -4.09 - - - - - -4.22 -0.49 -5.75 -3.27 -5.35 -2.8 -4.42 - - - -
-0.82 -0.9 -2.16 -0.11 1.51 - - -5.91 - - - - -0.53 -2.75 -1.99 -3.39 -1.46 -1.93 - -1.61 -0.97 - -0.74 -1.29 0.88 -1.46 - -2.3 1.54 -1.0 -3.34 -0.86 3.08 2.89 4.46 -1.91 - - - -1.56 - -2.33 - - - - -3.9 -3.72 0.42 -1.26 0.1 -2.84 -2.23 - -2.16 -2.49 -1.56 -
- - -6.62 -6.34 -7.75 - - -11.06 -11.38 - - -11.46 -6.33 - - - - -7.67 - - -3.0 -3.27 -3.65 -3.15 -2.19 -3.73 -9.23 -2.38 -1.72 -1.58 0.44 0.94 1.86 4.78 4.31 0.64 - - - - - -3.22 - - -1.18 - - -5.27 - - - -8.65 -8.72 -7.03 - - - -
-6.23 - -7.58 - - - - - - - - - -5.18 - - - - - - - -0.95 - -5.5 -2.06 -1.57 - - -0.78 -0.58 0.45 -1.71 1.24 2.13 5.46 1.64 - - - - - - - - - - - - - - - - - -9.53 -6.34 - - - -
- - - - -3.46 - -5.56 - - - - - -5.54 -0.86 -1.7 -2.67 -5.74 -5.06 - - -1.54 - -7.87 -1.71 -0.78 - - -1.89 0.5 -0.74 -2.86 1.76 3.93 4.75 2.71 -6.4 - - - - - -9.71 - - - -2.52 -1.67 - -8.13 - -4.85 -2.2 -1.62 - - - - -4.37
-5.6 -3.48 -7.2 -3.63 - - - 1.0 0.23 - - - -5.96 -1.12 -2.33 -0.8 - - - - -0.97 -5.85 -3.58 -2.48 -1.59 -2.74 - -1.36 0.14 0.78 0.04 0.97 2.29 2.99 4.9 1.35 - - - - - -1.66 - - -1.53 - - - -6.99 - - - - - - - - -
- - - -5.27 -7.93 - - -9.48 - - - - - - - - - - - - -1.15 - -4.89 -2.1 -1.08 - - -0.54 -0.03 0.1 -0.56 1.36 2.27 5.12 3.49 -4.95 - - - - - - - - - - - - - - - - - - - - - -
- - 2.16 -1.9 -2.3 -3.41 -0.22 - - - - - 3.94 -2.33 -4.72 -5.53 -2.28 -3.45 - - -1.94 - - -3.0 -1.37 - - -3.71 -1.12 -3.0 -1.77 -0.85 1.47 2.59 4.62 -3.2 - - - - -1.21 - - - - - - - - - - - -6.45 - - - - -
-5.82 -1.96 -6.27 -0.41 - - - - - - - - -3.43 - - -7.45 - -7.07 - - -1.1 - -3.9 -1.95 -1.58 -6.15 - -0.27 -0.44 0.5 0.85 1.84 2.47 4.77 3.78 -3.65 - -5.33 - - -3.18 -7.17 -5.19 -4.14 - - - -2.59 -2.92 - - - -8.95 -2.06 - - - -4.1
- -9.22 - - - - - - - - - - - - - - - - - - -1.56 -7.39 -4.96 -2.34 -0.75 -9.65 -8.13 -1.84 0.45 -0.91 -0.72 0.97 3.03 3.99 4.8 -4.77 - - -6.63 - -6.63 -8.9 - - - - - - -8.05 -9.24 -6.34 - -10.87 - - - -9.31 -7.02
- -9.92 - - - - - - -12.63 - - - -10.9 -10.78 -9.95 -11.92 -8.74 -9.53 - - -0.67 - -3.89 -1.55 -0.55 - -11.23 -0.32 0.59 0.72 0.37 2.12 3.13 4.25 4.23 -3.9 - - - - - -10.31 - - - -9.41 - - -11.08 - - -5.86 -7.64 - - - - -6.5
- -5.53 - -6.0 - - - - - - - - -4.36 -8.65 - - - - - - -1.4 - -1.45 -1.84 0.12 -6.93 - 0.24 0.69 0.59 2.82 1.87 2.52 2.91 4.78 -3.83 - - - - - - - - - - - - - - - - -8.77 - -6.2 - - -5.57
-1.64 -2.29 -2.25 2.25 -2.33 - -1.54 -6.54 -9.43 - - - -1.32 -0.5 0.24 -0.25 -1.23 -1.59 -5.25 -3.92 -1.96 -6.34 -5.05 -2.49 -0.28 -3.3 -4.2 -2.16 0.4 -1.03 -1.45 0.47 2.55 1.71 4.91 -1.37 -1.64 -2.22 -2.73 -1.92 - -2.63 -2.42 - -2.45 -5.78 -7.05 -4.14 -2.59 -7.34 -1.12 -2.8 -0.86 -1.67 - - - -6.29
- - -6.14 -1.53 - - -4.45 - -9.1 - - - -5.1 - -7.24 -5.11 - - - - -1.89 - - -2.49 -0.83 -6.75 - -2.21 0.92 -1.83 -3.45 0.14 2.94 4.02 4.85 -2.13 - - - - - - - - - -6.98 -8.02 - -6.48 - - - -8.9 - -5.97 - - -
- - - -0.39 - - - - - - - - - - - - - - - - -2.88 - - -2.17 -0.9 - - -2.41 0.95 -1.59 - -0.33 2.66 4.61 4.46 -2.33 - - - - - - - - - - - - - - - - -5.63 - - - - -
- -7.64 - -7.18 -7.28 - - - - - - - -8.28 - - - -9.18 - - - -1.25 - -5.81 -2.25 -0.55 -8.16 -9.74 -1.7 0.85 -0.62 -1.97 1.01 3.34 3.85 4.75 -2.68 - - - - - -11.85 - - -7.15 -9.79 -10.47 -8.33 -6.94 - - - -9.33 -8.9 - - - -
- - - -7.18 -4.64 - - - - - - - -6.92 -4.43 -4.66 -5.63 - -7.72 - - -1.0 - -6.06 -1.66 -0.71 - - -2.11 1.13 -0.83 -2.6 1.41 3.62 4.78 3.42 - - - - - - - - - - - - - - - - - -12.09 - - - - -
-0.34 -1.94 - -2.28 -3.37 - - - -1.9 - - - -3.28 -5.25 -5.38 - - - - -3.05 -3.53 - - -3.54 -1.7 -4.32 - -1.4 -0.55 -0.15 -0.06 0.47 2.18 5.08 3.65 - - - - - - -6.71 - - - -3.16 - - -3.47 - - - -3.5 -2.7 - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.