Heatmap: Cluster_51 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Ovary
Microspore
Generative cell
Pollen
Sperm cell
Pollen grain
Pollen tube
Pollen tube (1.5h)
Pollen tube (3h)
Pollen tube (9h)
Pistil
Style (before flowering)
Style (after flowering)
Style (pollinated, after flowering)
Flower (buds)
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Pericarp/Exocarp (4 DPA)
Pericarp
Pericarp (5 DPA)
Pericarp (7 DPA)
Pericarp (10 DPA)
Fruit (mature green)
Fruit (breaker stage)
Septum (7 DPA)
Septum (10 DPA)
Septum/Seed (4 DPA)
Seed (5 DPA)
Seed (7 DPA)
Seed (10 DPA)
Seeds (10 DPA)
Seeds (20 DPA)
Seeds (30 DPA)
Seeds (Pk-stem)
Seeds (Br-stem)
Seeds (Pk-equatorial)
Seeds (Pk-stylar)
Seeds (Br-stylar)
Seeds
Seeds (RR)
Seeds (LR)
Seeds (MG-equatorial)
Hypocotyl
Seedling (leaves)
Seedling (roots)
Callus
Meristem (vegetative)
Meristem
Apical meristem
Leaf
Root
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root hair cells
- - - -1.32 -3.66 - -0.89 -5.53 -3.87 - - -4.04 -2.63 - - - - - - - 1.17 -2.49 - 0.3 0.83 -1.35 - -0.91 0.77 -0.02 -1.25 0.05 1.18 5.24 0.92 -1.41 - - - 0.85 - -1.89 - 0.56 - - - - -2.18 - - - -5.5 - - - - -
-1.26 -0.28 -1.06 2.97 -0.72 - - -0.7 -1.3 -1.23 -1.85 -1.97 3.79 -1.11 -1.4 -0.01 -1.71 -1.73 - -0.34 - -1.26 -1.92 -1.65 - -1.67 -0.15 - -0.6 -1.43 -1.79 -1.74 -2.72 1.15 0.55 -0.37 - - - - - -0.93 0.35 - 1.3 -2.24 -2.0 -0.79 3.59 - -0.24 - -1.23 0.44 - - -1.44 -
-0.39 - 0.14 3.46 - - - - - - - - 3.34 -3.33 - -5.15 3.47 -2.73 - - -1.48 - -3.67 -1.99 - -0.52 - 1.14 -3.8 0.58 1.88 1.28 -0.88 3.15 - -1.9 - - - - - -5.42 -1.12 - - - - -0.53 0.13 -2.81 - - - -1.42 - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - 3.63 - - - 5.51 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-0.37 - - - - - - - - - - - -1.67 - - - - - - - -0.58 - - - -0.51 - - - -0.32 - - 0.02 1.31 5.32 2.43 - - - - 1.86 - -0.04 - - - - - - 0.28 - - - -2.85 - - - - -
1.67 2.22 0.33 -4.52 -3.24 - -7.23 - - - - - -1.54 -2.25 -3.01 -1.98 0.13 0.18 -0.18 2.43 -0.32 -3.81 -0.37 0.17 -0.47 -2.62 -9.5 -0.78 0.38 -1.26 -0.75 -1.14 0.87 1.65 3.45 0.63 -4.33 -4.89 -3.0 -2.57 -1.34 -1.51 -2.94 -3.23 -0.85 0.0 -4.8 0.17 3.23 -5.93 -6.76 -6.81 -0.34 -2.51 -6.29 -5.64 -8.27 -1.34
-1.86 -2.34 -1.75 0.76 2.14 - 2.72 -4.06 -3.93 -5.04 -4.88 -4.55 0.58 -1.52 -2.17 -2.18 -2.49 -2.75 -4.58 -1.05 -2.45 - -3.54 -3.34 -3.36 -1.39 -3.39 -1.99 -2.04 -1.63 -3.83 -1.9 -1.21 0.44 2.64 3.51 -4.1 -2.45 -3.06 -3.5 -3.06 0.11 -1.95 -3.02 -0.08 -1.01 -7.35 1.05 1.42 -1.81 -2.63 -1.4 -1.9 -0.58 0.05 -0.03 2.87 -1.76
4.12 2.83 2.17 0.39 - - - - -6.26 - - - 1.03 - - -6.17 -1.82 -1.23 - - - - - - -3.0 -0.9 - - -1.7 - - -6.45 -1.51 - 4.46 0.38 - - - -3.38 - -5.43 - - - - -5.94 - -5.49 - - -4.71 -4.41 - - - - -
0.83 - 1.13 - 1.37 0.95 - 2.54 1.47 - -1.55 - 2.2 - - -0.88 - - - - - 0.83 - - - 0.53 - - - - - - -0.85 - 2.06 3.61 2.35 - - - - -1.12 - - 3.28 - - - - - - - - - - - - -
- - - 3.13 - - -1.27 0.82 0.43 -1.66 -1.82 -1.12 - - - -2.94 - - - - - - - - - - - - - - - - - 2.77 3.55 2.71 0.34 1.24 1.38 1.6 1.38 0.77 - 1.42 1.43 - - - -1.16 - - - -4.09 - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 5.86 - - - - - - - - -
- - - - - - - - 3.15 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.53 4.71 - - - - - - - - -
- 1.3 - - - - - - - - - - - - - - - - - - - - - - - -0.27 - - - - - -0.48 -0.07 - - 0.96 4.0 2.65 - 2.96 - 2.26 1.74 - 2.59 - - - 1.8 1.72 - - -3.17 - - - - -
-0.03 - -0.56 - - - - -3.19 - - - -1.03 -0.12 - -0.86 -1.84 0.52 - - - -0.6 - - -1.18 - - -1.29 - -1.08 - 0.03 1.87 2.19 - 5.06 1.72 - - - - - -2.7 - - - - - - 2.12 - - - -2.07 - - - - -
- - - - - - - - 2.38 - - 2.43 - 3.82 - 3.53 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.36 - - - 0.22 - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.65 5.04 - - - - - - - - -
- 2.31 - 1.49 - - -0.14 -4.5 - - - - 0.85 - - - - - - - - - -0.95 -2.92 -2.57 - - -0.94 -0.78 -0.9 3.07 -1.05 0.59 1.3 4.75 1.56 - - - - - -2.5 - - 0.34 - - - -0.26 - - - - - - - - -
- - -1.32 2.47 -0.24 - 0.71 -4.23 - - - - 1.08 1.69 1.69 1.87 - - - - 1.67 - 0.86 0.98 -1.63 - - -0.07 -1.47 1.8 -0.54 -1.38 0.01 2.57 0.38 - - 0.81 - - 1.76 -1.34 0.9 - - -0.12 - - 1.36 -0.14 -0.38 -0.16 -3.68 0.36 - - 0.08 -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
0.47 1.05 -1.02 4.38 -0.43 - - -3.09 - - - - 2.48 -0.08 0.1 -3.02 -1.5 -3.09 - -0.25 - - - -2.83 - - - - -1.15 - - -3.3 - - - - 1.53 -0.38 - -0.08 - -2.5 - - 0.61 - - 2.02 2.8 - -0.27 -1.03 -1.99 1.75 - - -1.22 -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.92 3.22 2.08 1.11 - - - - - 4.27 - - - 0.26 - - - - - - 4.17 - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.36 - - - 3.79 - - - - - - - - - - - - - - - 4.56 - - - - - - - - -
- - - 0.95 - - - -6.07 - - - - -5.26 - - - -0.95 - - - - -2.71 - - - 0.47 -4.4 - - - - -6.43 - - - 5.14 -1.73 -1.69 -1.69 -0.9 - 0.25 -1.06 -0.65 2.75 - - -2.24 -2.81 - - - 1.07 1.71 -1.74 -0.65 0.61 -3.25
-2.2 1.83 -0.45 3.99 3.07 - 0.1 -6.28 -4.29 -5.64 - - 0.83 -6.27 -5.83 -5.75 0.22 -3.75 - -5.15 -1.15 - -3.3 -2.47 -2.98 -0.78 -4.51 -0.99 -1.58 -3.24 0.16 0.99 1.24 1.8 1.74 -1.32 -2.36 -3.66 0.26 0.22 - 0.72 0.14 - -0.33 -1.53 - -2.25 0.68 -1.76 -2.31 -5.29 -3.24 -1.64 -4.81 -3.73 -1.27 -
-5.42 -3.65 -2.35 -2.74 - -3.5 - -8.85 -4.82 - - - -2.56 -1.56 - - 0.83 -4.72 - -2.32 -4.3 -1.28 -3.09 -4.86 -3.48 0.89 -2.96 -3.24 -5.0 -3.58 -2.88 -3.91 -2.11 -1.26 3.5 4.6 -2.53 -3.2 - -4.43 -1.48 1.97 -0.16 - 2.78 -3.59 -6.33 - -2.23 -2.79 -1.19 -5.0 -3.23 0.78 - - - -0.98
-0.58 - -1.02 4.5 - - 0.66 -3.36 -3.32 -4.02 - - -0.94 -2.19 -4.21 -4.13 1.64 -2.17 -1.22 -3.52 -1.96 - -4.12 -1.47 -1.59 0.31 -4.24 -3.08 -3.65 -1.62 -0.52 -1.34 -2.48 - - -1.04 - - - -0.89 - 1.83 2.69 - -0.86 0.09 - 1.02 1.13 -0.14 -2.29 -3.67 -1.67 -0.1 -3.19 -2.11 0.35 1.41
- - - -0.39 - - - - - - - - -2.93 - - - - - - - - - - - -3.37 1.13 - -1.85 - - - - -1.5 - 3.21 3.63 1.53 0.83 -0.2 1.64 0.8 1.5 3.01 2.84 1.82 - - - -2.37 - - -3.12 - - - -2.78 -2.82 -
- - -2.51 -0.19 0.34 - - -0.46 -4.55 - - - -0.65 1.56 - -2.2 - -3.04 -0.71 - - - - - - 0.3 - - - - - - - - - -0.98 - -0.53 - - - -4.28 - - - - - 4.35 1.3 - - - -2.64 4.55 - - - 0.64
- - - -0.45 -1.33 1.62 -2.41 0.28 -1.04 -1.37 -1.5 -1.22 -1.86 0.46 - -4.13 - 0.25 - - - - - -5.42 - -1.87 - -2.83 - - - -5.34 - - -0.69 1.82 - -3.2 - - -1.25 -4.81 - - - - -5.45 3.4 -0.5 - - - -6.92 3.73 - - - 4.18
- - - 0.28 1.25 3.77 1.47 1.93 0.27 0.62 0.46 - 2.73 - - - - -1.06 - - - - - - - - 0.36 - - - - - - - - 2.51 - - - - - -1.03 - - - - - 1.18 2.74 - - - -2.97 2.69 - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - -0.75 - -0.15 2.06 - - - - - -21.94 - -3.19 - -2.42 -15.88 1.78 - - 1.23 - - -2.37 -22.42 -0.58 -2.46 - - - - 2.65 2.06 2.38 2.03 -0.07 1.28 - - - 2.74 1.5 - - 3.02 - - - 2.15 - - - -4.01 - - - - -
- 1.21 - 3.0 - - -2.38 - - - - - 0.38 1.13 -0.86 -0.39 -1.71 -0.66 -0.94 - -2.92 - -3.27 -2.2 -1.38 -1.97 -0.97 - -2.41 - 0.24 -1.96 1.41 1.67 4.01 -0.46 - -1.7 0.28 -1.23 - -1.46 -0.58 - -0.68 - -3.92 - 3.46 - - -2.64 -1.11 - - - - -
- - - -1.57 - - - -5.59 - - - - -1.57 - -2.8 - -2.81 - - - -0.56 - - -2.78 -1.25 - - -0.86 0.38 1.29 0.27 2.32 3.06 3.88 4.43 - - - - - - - - - - - - - -1.03 - - - -2.41 - - - - -
0.24 2.14 -0.96 -1.02 - - - -7.16 -8.12 - - - -4.41 -4.31 -1.83 -1.33 -1.99 -2.89 -1.88 3.32 -0.96 -3.81 -3.95 -0.23 -1.84 -1.06 -2.34 -0.06 0.12 -0.59 -0.44 0.29 1.44 3.28 3.34 0.84 -1.87 -2.56 -0.66 -0.38 -1.18 -1.06 -1.52 -1.21 -0.86 -0.26 -3.74 -1.94 0.38 -1.69 -0.57 -4.08 -4.36 -1.82 -1.61 -1.98 - -5.18
- - - 1.96 - - - - -2.14 - - - 0.46 -0.35 -0.14 -0.27 1.47 - - - 1.45 - -0.05 1.45 -1.18 - - -0.01 - - -0.01 1.27 0.8 4.88 -1.84 1.58 - - - - - - - - - 0.44 - - - - - - -2.3 - - - - -
- - - 5.12 - - - - 1.79 - - - 3.23 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 3.38 - - - - - - - - -
- - - - -1.05 - - - - - - - - - - - - - - - -1.62 - - -1.34 -0.87 - - -0.6 0.82 0.37 -1.09 2.09 3.71 4.61 3.35 - - - - - - - - - - - - - - - - - - -4.55 - - - -
- - - 4.4 - - - -1.79 -3.06 - - - - - - - - - - - - - - - - - - - - - - - - - - - 2.18 2.1 3.27 - - 1.02 1.27 3.31 - - - - - - - - -4.57 1.87 - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 5.49 3.7 - - - - - - - - - - - - - - - - - - - - - - -
- - -1.3 1.86 - -1.31 - - -3.49 - - - 2.14 - - - -0.87 - - - 0.28 - - -0.2 -1.99 - - -0.14 0.05 1.11 2.74 3.34 3.65 3.26 1.06 - - - - - - - - - - - - - 0.12 - - - -5.93 - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-6.15 -4.23 1.2 5.06 -3.27 -3.1 -2.85 -5.91 -5.54 -5.4 -8.04 -7.09 -3.95 1.63 0.84 0.59 2.07 -0.6 - - -4.64 -2.49 -5.98 -5.97 -5.94 -4.19 - -5.54 -6.48 -3.4 -2.77 -2.0 -3.25 - 1.1 1.24 -4.83 -4.92 - -5.16 - -3.82 - - -1.04 -6.04 -2.26 -0.68 -3.25 -2.61 - -2.26 -0.39 0.91 -2.59 -3.97 -2.38 -
- - 1.04 - - - - 0.21 - - - - - 1.53 - - 2.93 1.76 - - 2.61 - - 0.79 0.63 1.98 2.68 - 2.31 - - 0.26 0.78 - - - - - - - - - - - - - - - 1.46 - 1.85 - 1.23 2.2 - - - -
- - - 3.27 3.19 - - - -0.41 - - - 1.69 - - - - - - - - - - - - - - - - - - 0.46 - - - - - 3.92 - 3.74 - 2.45 - - - - - - - - - - - - - - - -
3.84 3.58 1.94 1.52 3.29 -5.33 0.61 -3.8 -5.53 -3.24 -4.08 -5.42 1.17 -2.96 - -2.99 -2.37 -3.45 - -4.84 -3.85 - -3.33 -2.26 -3.46 - -5.69 -1.78 -3.62 -2.64 -0.02 -0.57 -0.48 0.46 1.82 -3.94 - - -2.15 - -2.15 -3.78 -3.16 - -3.31 -2.98 - - -0.37 -1.9 -3.99 -5.07 -4.91 -3.33 - -4.41 -3.88 -
- -0.2 - 0.44 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 2.26 5.14 3.65 - - - - - -0.49 - - 1.3 - - - - - - - - - - - - -
- - - 5.31 - - -2.46 -2.7 -3.02 -5.46 - -3.66 -1.89 - - - -1.26 -4.02 - - - - - - -3.06 - - - -0.96 - - -3.44 -1.29 - 3.87 0.18 - -2.91 - - - - - - - - - - -3.56 - - - -8.77 - - - - -
- - - - - - - - 0.66 - - - - - - - - - - - - 4.34 2.41 1.86 - - - - - 2.48 2.43 2.63 - - - - - - - - - 3.3 - - - - - - - - - - -1.94 - - - - -
- - 0.7 - - - - - - - - - - 0.51 1.24 -1.94 - -1.62 - - - - - - - - - - - - - -1.24 -0.2 - - - 3.44 2.46 2.21 1.63 2.21 2.63 2.79 - 2.84 -0.65 - - 0.04 - - - -2.89 - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
1.09 0.68 1.7 1.43 -1.74 -1.91 - -4.31 0.03 0.99 1.53 1.16 -2.3 - - -4.16 -1.87 -1.7 1.54 1.25 -1.99 0.66 - -4.82 -3.94 - - -0.93 -1.55 -2.48 -3.48 -2.52 -0.32 1.07 2.49 -1.5 0.23 -0.12 1.27 0.43 - -1.14 0.94 - - 1.26 -1.07 -0.3 -0.88 1.66 - 1.11 -0.96 -1.72 -0.95 -2.31 1.03 -
-2.39 -2.42 -0.78 1.83 1.21 -2.93 - -5.54 -5.11 -6.04 -4.79 -5.86 0.73 0.22 -0.64 -1.29 - -2.71 - -2.52 - - - - -3.15 - -3.29 - - -2.12 - - -1.42 1.05 2.41 0.98 - -1.86 - - - -1.58 - - -0.71 -2.61 -4.01 -0.35 -0.84 3.42 -1.1 -1.7 -1.89 -0.92 -0.45 1.17 4.09 0.5
- - - - - - - - 1.05 - - - - - - - - 0.47 - - - 5.21 - - - - - - - - - - - - - - - - - - - - - - - - - 1.34 - - - 2.54 -1.32 3.15 - - - -
3.37 3.12 -0.99 -4.41 - - - - - - - - -1.5 - - - - -0.62 -1.93 - -2.36 - -2.64 -1.67 -1.83 -1.72 - -0.31 -2.44 -0.87 1.11 0.55 -0.39 1.19 4.18 2.97 - - - - - -3.25 -2.42 - 0.21 -5.01 - -5.22 -4.17 - -3.56 - -4.5 - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.12 - - - - - - 5.35 - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 5.86 - - - - - - - - - - - - - - - - - - - - - - - - -
- - -1.68 -1.26 - - 1.0 -4.07 - - - - -0.47 - - - - -2.94 - - -1.48 - - - -2.35 -1.19 - 0.05 -1.97 0.8 -1.33 2.11 3.22 4.44 3.37 - - - - - - -3.6 - - - - - -2.07 -1.03 - 0.37 - 1.14 - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.