Heatmap: Cluster_95 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Ovary
Microspore
Generative cell
Pollen
Sperm cell
Pollen grain
Pollen tube
Pollen tube (1.5h)
Pollen tube (3h)
Pollen tube (9h)
Pistil
Style (before flowering)
Style (after flowering)
Style (pollinated, after flowering)
Flower (buds)
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Pericarp/Exocarp (4 DPA)
Pericarp
Pericarp (5 DPA)
Pericarp (7 DPA)
Pericarp (10 DPA)
Fruit (mature green)
Fruit (breaker stage)
Septum (7 DPA)
Septum (10 DPA)
Septum/Seed (4 DPA)
Seed (5 DPA)
Seed (7 DPA)
Seed (10 DPA)
Seeds (10 DPA)
Seeds (20 DPA)
Seeds (30 DPA)
Seeds (Pk-stem)
Seeds (Br-stem)
Seeds (Pk-equatorial)
Seeds (Pk-stylar)
Seeds (Br-stylar)
Seeds
Seeds (RR)
Seeds (LR)
Seeds (MG-equatorial)
Hypocotyl
Seedling (leaves)
Seedling (roots)
Callus
Meristem (vegetative)
Meristem
Apical meristem
Leaf
Root
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root hair cells
- - - 4.78 -6.18 -6.6 -8.82 -4.98 -5.99 -6.69 -6.56 -6.8 -6.16 - - - 4.7 2.13 - - - - - -8.9 -10.53 - -10.06 - -9.85 - - -9.38 - - - - - - - -7.67 - - - - - - - -6.96 -7.11 - - - -7.67 -8.15 -7.65 - - -
- - - 0.65 - - - -2.55 - -3.37 -3.89 - 1.67 - - - 3.45 - - - -0.54 - 1.89 4.26 2.33 -0.9 -0.5 0.03 -21.27 0.36 1.6 1.95 0.93 - - -0.73 - - - - - - - - - - - - -2.13 -7.43 - - -2.18 - - - - -
2.03 2.2 - - - - 2.84 - - - - - 0.73 -0.0 - - - - - - - - - - - - - - - - - - - - - - - - - 5.09 - -0.45 - - - - - - 1.99 - - - -0.38 - - - - -
- - - - - - - 3.85 - - - - - - - - - - - - - - - - - - - - - 2.98 - - - - - - - - - - - - - - - - - - 5.16 - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - 5.86 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - 4.48 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 5.14 - - - -1.68 - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 5.84 - - - - - - - - - - - - -0.61 - - - - -
-6.54 -6.97 -2.04 4.78 -0.51 -0.43 0.06 0.17 0.27 -0.07 -0.01 -0.08 -3.07 -0.97 -4.34 -3.16 3.25 1.91 -2.79 -3.85 -2.26 -2.32 -4.29 -3.08 -3.14 -4.27 -5.7 -2.57 -1.18 -1.98 -3.35 -1.97 -1.28 -0.98 -0.03 -2.48 - -6.58 - -8.11 -3.74 -1.42 - - 0.34 -1.75 -4.33 -1.13 -4.07 -7.81 -3.53 -1.81 -2.15 -2.49 -1.35 -5.05 -5.08 -1.32
- -5.99 -8.5 4.53 -7.54 - - - - - - - -6.15 -4.14 -8.01 -6.28 4.63 3.32 - -8.23 -8.12 - -9.09 -9.1 -9.89 - -9.08 -8.92 -8.51 -6.86 -8.77 -9.25 -7.72 - - - - - - - - -10.86 - - - -6.76 -9.89 -4.42 -6.07 - -8.13 -8.46 -7.63 -6.85 -5.76 -6.53 -7.27 -
- - - 4.8 -3.43 - - - - - - - -4.25 -4.36 - -7.27 3.32 1.87 - -5.71 -4.07 - - -4.19 -1.6 - -6.49 -6.32 0.02 -3.6 - -1.69 1.12 1.95 2.89 -0.51 -4.04 -5.28 - - - -5.84 - - - - - - -4.12 - -4.3 - -4.36 - - - - -
-5.43 - - 4.56 -5.07 - - - - - - - -3.44 -5.75 - - 3.99 4.19 - - -6.53 - - - -7.5 -5.99 - -6.66 - - - -4.97 -4.08 - - - - - - - - - - - - - -7.43 - -6.83 - - -4.99 -5.94 - - - - -
1.87 -0.16 1.14 2.57 - - - -7.04 -6.68 - - - 2.59 -5.41 -2.5 -0.27 2.98 0.77 - -4.05 -3.12 0.03 - -3.93 -3.18 -2.1 -0.9 -3.5 -1.11 -3.02 -4.49 -3.65 -2.38 - -2.86 -2.78 1.43 0.97 1.73 1.36 0.14 1.12 2.46 2.32 -2.18 -1.92 -4.68 -5.22 -5.03 -8.05 -4.69 -4.14 -2.48 -4.09 - - - -
-0.56 -0.42 0.65 2.87 -1.79 - -3.93 - - - - - 0.8 -2.63 -2.02 -1.73 2.04 1.12 1.97 -0.48 0.62 -3.82 -1.99 -0.98 -1.31 -3.07 -2.36 1.21 1.42 1.41 -1.35 -0.39 -1.39 -2.41 -1.85 -1.12 -2.29 -1.61 - -1.97 -3.21 -2.51 -2.53 -2.17 -1.65 0.51 -1.34 2.07 -1.61 0.2 1.59 0.11 -0.86 -0.07 1.4 0.93 -5.83 0.45
- - - - - - - 3.18 1.91 2.64 2.29 2.97 - - - - - 3.65 - - - - - 0.63 - - 2.4 - - - - - - - - - - - - - - - - - - - - - 2.56 - - - -0.04 - - - - -
- - - 1.89 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 2.76 - 4.99 - 0.67 - - - 2.28 - - 3.12 - - - -0.74 - - - - -
- - - - - - - - - - - - - - - - 4.82 - - - - - - 0.77 - - - - - - - - - - - - - - - - - - - - - - - 3.93 2.09 - - - -0.12 2.93 - - - -
- -0.17 -3.06 4.49 -1.9 - -2.36 -2.76 -4.1 -4.21 -2.51 - -2.3 -3.52 - - 4.63 -4.37 - - -1.95 - - -2.0 -2.75 - - -0.9 - 0.28 0.5 0.26 0.0 - 0.72 - - - - - - - - - - -2.15 - - -0.85 - - - -7.86 - - - - -
- 0.72 -1.15 2.48 - - - - -3.35 - - - -1.4 - - - 5.44 - 0.64 - - - - -1.92 - - - 0.27 - - - -1.24 0.05 - - 0.44 - - - - - -3.35 - - - - - - -1.33 - - - -3.04 - - - - -
- 2.64 - 1.77 -0.49 - 2.23 -2.69 0.57 -2.27 -2.35 -1.07 -0.74 - - - 4.67 -1.37 - - - - -0.68 -3.21 -1.67 - - - -1.3 -0.0 2.04 1.17 0.38 - - - - - - - - - - - - - - - 0.75 - -0.2 - -1.63 - -0.1 - - -
- - - 2.48 - - - -1.9 - - - - - - - 0.11 - - - - 1.2 - 0.8 3.36 -1.15 - - - - - 1.29 0.52 -6.78 - - - - - - - - -0.8 - - - - - - 4.62 - - 1.34 0.14 1.55 - -0.67 - -
- - - 0.91 - - - 1.38 -0.4 - - -0.37 1.88 - - - 4.73 2.88 - - - - - - - - - - - - - -1.14 - - - - - - - - - -0.03 - - - - - - 3.2 1.85 - - -3.24 - - - - -
-5.41 -6.9 -0.17 2.55 -5.49 - - - -7.72 - -8.65 - -1.9 -0.68 -2.59 -2.84 4.44 -1.63 -0.88 -2.01 0.69 -4.48 0.36 1.04 0.51 -1.75 -4.94 0.55 1.44 0.92 0.7 -0.03 -0.96 -3.65 -4.4 -6.22 - - - - -4.45 -7.47 - - - 1.83 -1.33 2.04 -3.62 -5.79 -6.6 -0.46 0.22 -1.22 -3.07 -7.03 -5.08 -1.41
-7.42 -9.86 -6.21 5.19 -0.89 -6.32 -4.41 -6.2 -6.29 -6.47 -6.32 -5.99 -3.86 -5.33 -4.86 -5.1 3.99 2.1 -8.64 -6.14 -5.73 - - -7.0 -7.94 -7.06 -9.74 -6.3 -5.6 -4.75 -7.3 -4.1 -4.84 -5.29 -4.1 -6.67 - -9.76 - -6.66 - -8.21 -8.28 - -8.58 -7.84 - -6.98 -4.7 -8.76 -7.33 -10.39 -8.98 -6.4 -7.65 -6.71 -7.12 -7.28
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 5.71 - 2.48 - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 5.86 - - - - - - - - -
- - 1.12 2.45 - - 1.77 - - - - - - 1.23 3.59 3.22 - 3.52 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 3.56 - - - - - - - - -
- - - 0.64 - - - -3.34 - - - - 0.09 - - - - -2.01 - - - - - - - - - - - - - -0.84 1.02 - 1.71 - 2.56 2.88 - 3.5 - 1.7 2.65 2.7 1.5 - - - 2.49 - - - -2.92 - - - - -
- - -5.77 3.91 -4.9 - - - - - - - -3.37 -0.76 -1.41 -1.44 4.21 -0.48 - -5.66 -3.38 -2.5 -3.04 -3.09 -2.19 -2.65 -0.97 -2.08 -3.47 -1.64 -1.31 -1.62 -2.16 - -2.04 -3.09 - -4.88 - -4.54 -2.89 -3.19 -3.9 - -4.05 -2.94 - -0.59 -0.89 - -3.48 -5.86 -3.0 -1.11 2.65 2.82 -5.51 1.62
- - -4.0 4.08 - - - - - - - -6.74 -0.15 -2.29 -2.94 -4.66 5.01 2.42 - - - - - - - - - - -4.81 - - -5.99 - - - - - -2.23 - - -1.12 -3.32 - - -2.28 - - -2.89 -0.42 - -4.27 - -5.3 - -3.37 -3.38 - -
1.02 0.84 0.12 2.63 -4.12 - - -5.06 -7.2 - - - -0.15 -3.33 -4.29 -3.9 3.29 -0.26 1.34 -1.08 -0.05 -3.14 2.1 1.05 0.02 -2.82 -2.66 0.83 -1.67 -0.1 0.76 -0.08 -0.37 - -2.25 -3.91 1.63 0.64 0.2 1.11 0.2 0.31 1.3 0.92 - -3.25 - - -1.35 -3.58 -2.81 - -3.17 -1.7 -4.41 - -1.42 -1.43
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 5.53 - - - - - - - - 3.56 - - - - - - - - -
- - - - - - - - - - - - 2.72 - 2.77 1.96 - - - - - - - - - - - - - - - - - - - - - - - 4.77 - 0.87 - - - - - - 3.53 - - - - - - - - -
-0.9 - -2.58 1.43 0.29 - - - - - - - 0.28 -3.1 - -2.61 2.23 - - -1.44 2.27 - 1.52 0.96 0.56 - -0.73 0.51 0.15 1.34 0.19 1.2 2.15 1.18 1.13 - - 0.33 - - - -1.29 - - - -1.48 -1.07 -1.23 1.02 1.77 2.36 -1.59 -1.14 -1.41 -0.43 -4.34 0.33 -0.02
0.17 2.1 - 4.07 - - - -0.71 0.65 0.1 0.7 0.3 - -1.56 -1.22 - 3.39 2.48 - - - - - - - - - - - - -1.71 - - - - - - - - - - - - - - - - - -1.22 - - -1.45 -1.29 - 3.09 0.76 - 0.13
- - - 5.23 -5.52 - -5.21 -10.28 -8.27 -7.68 - - -4.76 -9.12 - - 3.48 3.16 -6.01 - - - - -9.3 - - - - - - - - - - - - - - - - - - - - - - - -5.41 -3.78 - - - -4.21 -3.87 -6.68 - - -
- -8.91 - 4.84 - - - - - - - - -6.18 -5.99 - - 4.42 2.97 - - - - - - - - - - - - - - - - - - - -8.41 - - - -11.45 - - - - - - -7.05 - - - -11.69 -9.45 - - - -
- - - - - - - -1.76 - - - - - - - - - - - - - - - - - - - - - - - - 0.35 - - - - - - 4.31 4.23 0.87 3.38 - - - - - 2.49 - - - - - - - - -
- - - 3.27 - - 4.16 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 3.81 - 0.0 - - - - - - 3.89 - - - -0.89 - - - - -
1.71 1.09 0.77 4.27 - -2.32 -0.78 -1.32 -0.64 -1.69 -3.81 -2.33 -1.7 0.46 1.44 -1.48 2.52 1.19 - -1.9 -0.84 - -0.19 -0.48 0.31 - - -1.13 -1.37 -0.47 -0.41 0.18 0.18 - - - - -0.09 - - - -2.08 - - - -2.39 - 0.31 1.05 -2.63 -1.28 -1.73 -2.01 1.28 - - - -
- - - 4.8 -3.18 - -3.07 - - - - - -5.09 -5.68 - - 4.72 1.46 - - -6.98 - - - -6.94 - - - -6.41 -5.24 -5.49 -6.11 -3.09 - -3.36 -3.6 - - - - - -6.92 - - - - - - -4.28 - - - -7.77 -5.61 -2.64 -6.3 - -
-3.82 - - 0.54 - -2.76 - - -6.44 - - - -3.93 -2.88 -1.37 -1.54 3.81 1.76 - - -1.93 -3.14 2.15 2.17 2.55 0.31 -1.72 -2.32 0.16 -4.01 3.08 1.57 1.78 -1.41 0.23 -0.73 - -2.34 - - -1.21 -1.42 -2.07 - -0.21 -4.46 - - -2.96 - - - -0.86 - - - - -
-1.95 -1.59 -0.73 2.68 -1.95 - -7.08 - - - - - -0.84 -1.76 -2.35 -3.13 4.24 1.83 -1.3 -0.03 -0.96 - -0.58 -1.03 -2.12 -5.19 - 0.37 -0.29 0.2 0.45 0.64 0.7 1.38 0.49 -0.74 - - - - - -7.07 - - -3.86 0.21 -2.92 -1.67 0.29 -0.2 0.96 -2.44 -3.0 -1.22 0.01 0.83 -1.04 -0.02
-1.9 -2.72 -0.21 2.21 3.32 -0.12 2.3 1.23 0.59 -1.5 -1.29 -1.28 -0.34 0.36 0.28 0.61 2.6 0.75 -3.87 -2.52 -1.4 -1.69 -2.33 -1.69 -1.91 -2.31 -3.35 -1.56 -0.6 -0.87 -1.63 -1.15 -0.65 -0.34 -0.49 -2.14 -3.62 -4.26 -4.14 -4.02 -3.14 -3.19 -2.8 -4.1 -3.2 -0.38 -2.72 0.67 0.02 -2.06 -0.03 -1.51 -0.95 0.13 0.24 -0.83 1.31 -1.95
- - -4.37 5.1 -4.55 - -5.21 - -6.98 - - - 0.01 -6.87 -3.34 -4.03 1.82 2.5 - - -5.66 3.16 - -5.35 -5.29 -5.46 -1.05 -4.98 -5.27 - - - -6.86 - - - - - - - - -8.31 - - - -4.59 -5.82 -0.99 -5.3 -4.14 - -2.58 0.6 -2.78 -0.13 -1.88 - -5.1
-8.43 - -5.93 3.76 -5.56 - -7.46 -5.73 -7.76 - - - -2.0 -1.75 -0.46 -1.3 3.86 2.02 -5.46 - -5.08 3.18 -6.26 -5.16 -3.22 -2.77 0.65 -4.88 -4.25 -4.43 -6.31 -3.67 -2.28 -3.02 -2.0 -7.61 - - - - -5.83 -7.59 -6.69 - -6.98 -3.4 -4.3 -0.62 -5.27 -5.63 -5.74 -2.57 1.93 -2.35 1.9 1.45 -1.32 -1.48
-4.63 -4.39 -1.81 3.85 -3.11 -7.07 -5.19 -5.59 -5.54 -4.93 -4.96 -5.1 -0.59 -0.18 -1.27 -2.2 3.55 2.64 -1.32 -1.37 -0.37 0.03 1.0 1.71 1.54 -0.35 -1.13 -0.71 -3.7 -2.59 -3.59 -2.87 -2.51 -7.97 -4.65 -0.1 -2.66 -2.48 -3.13 -2.04 -2.82 -1.11 -3.05 -2.28 -0.19 -1.23 -0.36 -6.36 -6.22 -0.42 -1.65 0.22 1.31 -5.59 -7.81 -7.71 -5.43 -4.2
- -7.32 -8.05 4.87 -4.33 -3.45 -2.94 -4.56 -3.87 -4.26 -4.12 -4.03 -5.31 -4.3 -8.08 -7.4 4.24 0.33 - - - - - - -6.66 - - -7.38 - - -7.01 -8.05 -9.34 - -6.26 - - - - - - -8.34 - - - 0.84 - 1.34 -1.4 - - - -7.15 -0.4 -0.65 -0.68 -1.72 -0.11
- - - - - - - - - - - - - 2.66 - - 2.44 - - - - - 1.82 - - - - 3.0 2.14 - - 0.51 2.49 - - - - - - - - 0.34 - - - - - 3.24 3.66 - - - - - - - - -
-6.86 - -6.56 3.9 - - - - - - - - -4.47 -5.45 -8.33 -8.75 4.79 3.91 - -7.07 - - - - -6.67 - -7.79 - - -7.03 - - - - - - - -6.36 - - -4.25 -6.06 - - - - - -4.06 -4.55 - - - -8.99 -6.14 - - - -4.42
-3.71 -4.99 -5.89 4.9 - - - -8.71 -10.42 - - - -3.53 -7.29 -7.65 -8.86 4.57 1.87 -6.5 - -8.11 - -9.26 -8.42 -6.72 -7.12 -8.53 -7.56 -7.24 -7.58 -6.7 -8.36 -7.91 -4.6 -6.93 -5.81 -7.03 -6.53 - -6.57 - -7.65 - -5.95 -7.15 -7.05 - -5.48 -4.37 -7.1 -2.89 -8.96 -6.89 -5.33 -5.47 -7.39 -8.67 -5.69
-4.35 -6.5 -3.16 4.24 1.19 1.37 1.25 1.27 1.43 1.71 1.79 1.96 -3.53 -2.4 -2.55 -1.98 3.37 0.58 -5.28 -3.98 -4.66 - -5.44 -5.29 -6.29 -3.81 -7.96 -3.55 -6.33 -5.06 -4.02 -3.9 -4.55 -3.26 -3.64 -4.3 -5.1 -4.67 -4.06 -4.71 - -5.47 - - -5.02 -1.35 -4.0 -3.56 -3.06 - - -2.93 -2.99 -5.9 0.28 -2.1 - -5.03
- - - - 5.15 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.48 - - - - - - - - -
- - - 4.23 3.92 - - - - - - - - - - - - - - - - 2.44 - - - - - - - - - - - - - - - - - - - 0.49 - - - - - - 4.07 - - - -1.41 - - - - -
- - - - - - - - 1.64 - - - 3.37 - - - - - - - - - - - - - - - - - - - - - - - - - - 5.43 - - - - - - - - - - - - 0.64 - - - - -
0.27 - - 5.03 - - - - - - - - -0.49 - - - 2.04 2.87 - - - - -0.0 -0.64 -0.79 - - 0.97 - - 2.37 1.42 - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - 3.79 - - - - - - - 3.89 - - - - - - - - - - - - - - - - - - 1.4 - - - - - - - - - - - - - - - - 4.7 - - - -0.4 - - - - -
- - - - - - - - - - - - - - - - 5.45 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 3.85 - - - - - - - - -
1.22 0.79 - -0.06 - - - -2.76 - - - - 0.36 - 0.3 1.68 1.17 0.99 - 0.16 - 3.48 0.34 1.63 0.89 - - - -1.25 1.17 2.6 0.32 -0.61 - - - - - - - - - - - - - -1.61 - 1.54 - - 0.89 -0.18 - 2.96 - - -
- - -3.65 4.44 -1.03 0.12 -0.62 0.36 0.17 0.5 0.5 0.56 -6.15 -0.7 -2.93 -2.71 4.36 2.42 -5.28 - -6.21 - -7.48 -9.02 -6.87 - -7.97 - - -6.45 -7.48 -7.49 -5.78 -4.26 -2.76 -4.3 - -5.03 - - - -9.78 - - -5.22 -4.29 - -7.86 -3.28 -6.76 - - -5.45 - - -6.64 - -
-4.54 -5.6 -3.97 4.9 -2.02 - -4.65 -7.42 -7.48 -8.16 -8.35 -8.95 -2.98 -3.29 -3.02 -3.96 4.29 2.56 -5.33 -3.48 -6.62 - -4.16 -4.67 -4.52 -6.99 -4.86 -5.35 -5.59 -3.92 -5.04 -3.4 -4.24 - -3.92 -6.74 - -2.65 - -5.62 -1.97 -4.11 -5.98 - -3.98 -4.12 - -3.63 -3.04 -5.3 -6.32 - -3.03 -4.62 -2.81 -4.46 - -
- - - - - - - - - - - - - - - - 4.82 - - - - - - - - - - - - - - - - - - - - - - - - - - - - 3.97 - - 3.81 - - - - - - - - -
- - - - - - 3.74 - - - - - 1.84 - - - 3.64 - - - - - - - - - - - - - - 0.3 - - - - - - - - - - - - - - - 3.27 2.34 1.91 - - - - 3.16 - - -
- - - - - - 4.36 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 5.21 - - - -1.81 - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.