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Heatmap: Cluster_110 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00002p00266850 (evm_27.TU.AmTr_v1.0_scaffold00002.513)
 - - - - - - 1.75 - - 0.21 - - 3.09 - 2.74 - - - - 1.18 - -
AMTR_s00003p00191660 (evm_27.TU.AmTr_v1.0_scaffold00003.168)
 - - - - 3.58 - - - - - - - 3.01 - 0.24 - - - - -0.28 - -
AMTR_s00006p00234690 (evm_27.TU.AmTr_v1.0_scaffold00006.104)
 - - - - - - 2.48 - 2.01 3.13 - - - 1.88 - - - - - - - -
AMTR_s00007p00147140 (evm_27.TU.AmTr_v1.0_scaffold00007.107)
 - - - - 3.73 - - - 1.44 0.29 - - 2.25 - - - - - - - - -
AMTR_s00007p00147280 (evm_27.TU.AmTr_v1.0_scaffold00007.109)
 - - - - 3.72 - - - - - - - 3.15 - - - - - - - - -
AMTR_s00009p00048990 (evm_27.TU.AmTr_v1.0_scaffold00009.12)
 - -1.62 1.64 - 1.0 - -3.01 0.51 0.33 3.3 - - -0.13 - - - - - - -1.39 1.36 -
AMTR_s00010p00069010 (evm_27.TU.AmTr_v1.0_scaffold00010.37)
 - - - - 1.82 - -0.34 - 1.56 2.73 - - 1.8 - - - - - - - - 2.2
AMTR_s00013p00259990 (evm_27.TU.AmTr_v1.0_scaffold00013.267)
 - - - - - - - - - 4.46 - - - - - - - - - - - -
AMTR_s00016p00183360 (evm_27.TU.AmTr_v1.0_scaffold00016.145)
 - - - - 0.78 - 2.03 - 0.43 2.18 - - 0.91 0.66 - - - - - - - 2.78
AMTR_s00016p00256640 (evm_27.TU.AmTr_v1.0_scaffold00016.343)
 - - - - - - - - 0.55 3.62 - - - 0.79 2.71 - - - - - - -
AMTR_s00018p00096090 (evm_27.TU.AmTr_v1.0_scaffold00018.44)
 - - - - - - - - - - - - 2.76 3.93 - - - - - - - -
AMTR_s00019p00224540 (evm_27.TU.AmTr_v1.0_scaffold00019.289)
 - - - -5.6 0.93 - -3.25 - -1.48 -2.41 0.33 -0.23 2.16 2.51 0.99 -2.79 0.47 -0.84 -1.49 -1.18 -0.58 0.67
AMTR_s00019p00250890 (evm_27.TU.AmTr_v1.0_scaffold00019.413)
 - - - -12.33 -6.53 -4.0 -1.72 -0.48 2.38 1.62 -6.27 -4.62 1.59 3.24 -3.39 - - -7.62 -8.78 -9.95 - -8.13
AMTR_s00022p00226080 (evm_27.TU.AmTr_v1.0_scaffold00022.294)
 - - - - - - - - - - - - 4.31 1.12 - - - - - - - -
AMTR_s00025p00143670 (evm_27.TU.AmTr_v1.0_scaffold00025.156)
 - - - - - - 1.88 - 1.13 1.87 - - - 2.47 2.79 - - - - - - -
AMTR_s00028p00038190 (evm_27.TU.AmTr_v1.0_scaffold00028.5)
 - - - - - - - - - - - - 4.46 - - - - - - - - -
AMTR_s00029p00107220 (evm_27.TU.AmTr_v1.0_scaffold00029.108)
 - - - - 3.47 - - - - 3.45 - - - - - - - - - - - -
AMTR_s00029p00230590 (evm_27.TU.AmTr_v1.0_scaffold00029.366)
 - - - - - - - - - - - - 4.46 - - - - - - - - -
AMTR_s00030p00223090 (evm_27.TU.AmTr_v1.0_scaffold00030.172)
 - - - - - - - - - 4.46 - - - - - - - - - - - -
AMTR_s00034p00223490 (evm_27.TU.AmTr_v1.0_scaffold00034.94)
 - - - - 4.0 - - - - - - - 1.76 1.4 - - - - - - - -
AMTR_s00035p00180750 (evm_27.TU.AmTr_v1.0_scaffold00035.38)
 - - - - - - - - - - - - 3.48 - 3.43 - - - - - - -
AMTR_s00036p00145440 (evm_27.TU.AmTr_v1.0_scaffold00036.68)
 - - - - - - 2.75 - 2.51 2.96 - - - -0.06 -0.23 - - - - - - -
AMTR_s00037p00238350 (evm_27.TU.AmTr_v1.0_scaffold00037.162)
 - - - - - - - - - 4.46 - - - - - - - - - - - -
AMTR_s00038p00068610 (evm_27.TU.AmTr_v1.0_scaffold00038.28)
 - - - - - - - - - - - - 4.46 - - - - - - - - -
AMTR_s00038p00080440 (evm_27.TU.AmTr_v1.0_scaffold00038.36)
 - - - 2.25 1.54 - - - - - - - 2.51 1.82 0.89 - -0.42 - 0.55 -0.32 - -1.99
AMTR_s00038p00163940 (evm_27.TU.AmTr_v1.0_scaffold00038.102)
 - - - - -0.95 - - - - - - - 3.48 3.3 -2.88 - - - - - - -1.58
AMTR_s00038p00164880 (evm_27.TU.AmTr_v1.0_scaffold00038.104)
 - - - - -0.35 - - - 2.54 3.72 -0.49 - -1.44 - - - 0.11 - - - - -
AMTR_s00040p00189760 (evm_27.TU.AmTr_v1.0_scaffold00040.186)
 - 2.4 - - 1.04 - 0.65 - 0.23 - - - 3.04 - 0.29 - - - - 1.32 - -
AMTR_s00041p00176310 (evm_27.TU.AmTr_v1.0_scaffold00041.135)
 - - - - - - - - 3.25 1.69 - - 3.21 - - - - - - - - -
AMTR_s00041p00213960 (evm_27.TU.AmTr_v1.0_scaffold00041.226)
 - - - - - - - - - - - - 4.46 - - - - - - - - -
AMTR_s00044p00080750 (evm_27.TU.AmTr_v1.0_scaffold00044.49)
 - - - - 3.42 - - - - - - - 3.3 - 0.57 - - - - - - -
AMTR_s00045p00207440 (evm_27.TU.AmTr_v1.0_scaffold00045.278)
 - - - - -0.11 1.32 -0.05 1.52 2.54 1.92 - - 2.17 -2.38 - - - - - - - -1.13
AMTR_s00047p00091130 (evm_27.TU.AmTr_v1.0_scaffold00047.36)
 - - - - 2.96 - - - - - 1.65 - 2.26 - -0.03 - 1.38 - - 1.45 - -
AMTR_s00047p00213990 (evm_27.TU.AmTr_v1.0_scaffold00047.156)
 0.05 1.23 0.85 0.58 0.81 -5.4 -2.98 1.47 -1.21 2.51 -1.53 -0.94 -0.98 -1.17 -2.35 -2.51 -2.84 -0.91 -0.63 -1.31 -1.55 -1.96
AMTR_s00051p00129540 (evm_27.TU.AmTr_v1.0_scaffold00051.51)
 - - - - 4.03 - - - - - - - 2.51 - - - - - - - - -
AMTR_s00052p00099240 (evm_27.TU.AmTr_v1.0_scaffold00052.28)
 - - - - 0.83 - 2.58 - 2.38 2.16 - - -0.28 0.04 0.92 - - - - -0.31 - -
AMTR_s00053p00149850 (evm_27.TU.AmTr_v1.0_scaffold00053.96)
 - - - - - - - - - 2.64 - - 2.74 3.18 - - - - - - - -
AMTR_s00054p00147360 (evm_27.TU.AmTr_v1.0_scaffold00054.47)
 - - - - - - - - - - - - 4.46 - - - - - - - - -
AMTR_s00054p00153030 (evm_27.TU.AmTr_v1.0_scaffold00054.49)
 - - - - - - - - - - - - 4.46 - - - - - - - - -
AMTR_s00055p00218320 (evm_27.TU.AmTr_v1.0_scaffold00055.165)
 - - - - 1.28 - 0.44 - 2.61 3.37 - - -1.18 -1.4 - - - - - - - -0.15
AMTR_s00058p00156330 (evm_27.TU.AmTr_v1.0_scaffold00058.131)
 - - - - - - - - - - - - 4.46 - - - - - - - - -
AMTR_s00059p00183820 (evm_27.TU.AmTr_v1.0_scaffold00059.199)
 - - - - - - - - - 3.37 - - 3.54 - - - - - - - - -
AMTR_s00069p00179380 (evm_27.TU.AmTr_v1.0_scaffold00069.169)
 - - - - - - - - - 4.46 - - - - - - - - - - - -
AMTR_s00077p00066660 (evm_27.TU.AmTr_v1.0_scaffold00077.43)
 - - - - - - - - - 4.46 - - - - - - - - - - - -
AMTR_s00078p00150720 (evm_27.TU.AmTr_v1.0_scaffold00078.127)
 - - - - - - - - - - - - 4.26 1.48 - - - - - - - -
AMTR_s00078p00153010 (evm_27.TU.AmTr_v1.0_scaffold00078.130)
 - - - - - - - - - - - - 3.28 3.61 -3.54 - - - - - - -
AMTR_s00080p00087650 (evm_27.TU.AmTr_v1.0_scaffold00080.29)
 - - - - - - - - - 4.46 - - - - - - - - - - - -
AMTR_s00090p00141730 (evm_27.TU.AmTr_v1.0_scaffold00090.75)
 - - - - -0.93 - - - - - - - 3.82 -1.49 -0.16 - 2.52 - - -1.62 - -
AMTR_s00090p00157700 (evm_27.TU.AmTr_v1.0_scaffold00090.88)
 - - - - -0.51 - - - 2.83 3.82 - - -4.82 - - - - - - - - -
AMTR_s00090p00157710 (evm_27.TU.AmTr_v1.0_scaffold00090.89)
 - - - - -0.6 - -4.61 0.6 2.78 3.69 - - - - - - - - - - - -
AMTR_s00108p00016060 (evm_27.TU.AmTr_v1.0_scaffold00108.1)
 - - - - - - - - - - - - 4.46 - - - - - - - - -
AMTR_s00110p00101270 (evm_27.TU.AmTr_v1.0_scaffold00110.63)
 - - - - - - -1.04 - - - - 3.48 3.11 -1.38 0.41 - - - - - - -
AMTR_s00122p00116220 (evm_27.TU.AmTr_v1.0_scaffold00122.53)
 - - - - 1.69 - 1.38 - 1.75 3.68 - - - - - - - - - - - -
AMTR_s00124p00045850 (evm_27.TU.AmTr_v1.0_scaffold00124.5)
 - - - - - - - - - 4.46 - - - - - - - - - - - -
AMTR_s00157p00081450 (evm_27.TU.AmTr_v1.0_scaffold00157.44)
 - - - - 3.53 - - - - 3.39 - - - - - - - - - - - -
AMTR_s00167p00042130 (evm_27.TU.AmTr_v1.0_scaffold00167.17)
 - - - - - - - - - 3.74 - - - - 3.11 - - - - - - -
AMTR_s00190p00046410 (evm_27.TU.AmTr_v1.0_scaffold00190.18)
 - - - - 0.8 - 2.26 - 1.35 3.45 - - - -0.89 0.55 - - - - - - -
AMTR_s00325p00013080 (evm_27.TU.AmTr_v1.0_scaffold00325.1)
 - - - - - - - - - - - - 4.46 - - - - - - - - -
AMTR_s00374p00005120 (evm_27.TU.AmTr_v1.0_scaffold00374.1)
 2.31 - - - -0.66 - -1.86 - 1.04 0.54 -0.08 - 1.86 2.85 -0.25 - - - - - - -
AMTR_s00850p00009770 (evm_27.TU.AmTr_v1.0_scaffold00850.1)
 - - - - - - - - - - - - 4.07 - 2.38 - - - - - - -
AMTR_s01155p00010600 (evm_27.TU.AmTr_v1.0_scaffold01155.1)
 - - - - - - - - - - - - 4.0 - 2.57 - - - - - - -
AMTR_s02767p00008580 (evm_27.TU.AmTr_v1.0_scaffold02767.1)
 - - - 1.43 2.43 - -2.66 - -1.41 -0.88 0.08 - 1.24 0.89 0.9 - 0.6 - - 1.73 - -0.19

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.