Heatmap: Cluster_256 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	Leaf, Brachetto, 3 month old plants	Leaf, Pinot noir	Stem, Cabernet Sauvignon, N. parvum-infected, 3h	Stem, Cabernet Sauvignon, N. parvum-infected 24h	Stem, Cabernet Sauvignon, N. parvum-infected 6 weeks	Shoot apex, Chasselas Blanc,Preanthesis G stage	Shoot apex, Chasselas cioutat,Preanthesis G stage	Shoot phloems, Merlot	Flower bud, Female, Stage B	Flower bud, Female, Stage D	Flower bud, Female, Stage G	Flower bud, Female, Stage H	Flower bud, Hermaphrodite, Stage B	Flower bud, Hermaphrodite, Stage D	Flower bud, Hermaphrodite, Stage G	Flower bud, Hermaphrodite, Stage H	Flower bud, Male, Stage B	Flower bud, Male, Stage D	Berry, mid-ripening	Berry, post-fruit set	Berry, post-harvest withering	Berry, Zinfandel, veraison	Berry, Zinfandel, post-veraison	Berry, Zinfandel, harvest	Grape Skin, Cabernet Sauvignon, 20 Brix	Grape Skin, Cabernet Sauvignon, 22 Brix	Grape Skin, Cabernet Sauvignon, 24 Brix	Grape Skin, Cabernet Sauvignon, 26 Brix	Grape Skin, Chardonnay, 20 Brix	Grape Skin, Chardonnay, 22 Brix	Grape Skin, Chardonnay, 24 Brix	Grape Skin, Chardonnay, 26 Brix	Grape Skin, Merlot, 20 Brix	Grape Skin, Merlot, 22 Brix	Grape Skin, Merlot, 24 Brix	Grape Skin, Merlot, 26 Brix	Grape Skin, Pinot Noir, 20 Brix	Grape Skin, Pinot Noir, 22 Brix	Grape Skin, Pinot Noir, 24 Brix	Grape Skin, Pinot Noir, 26 Brix	Grape Skin, Sauvignon Blanc, 20 Brix	Grape Skin, Sauvignon Blanc, 22 Brix	Grape Skin, Sauvignon Blanc, 24 Brix	Grape Skin, Sauvignon Blanc, 26 Brix	Pericarp, Barbera, pea-sized berry	Pericarp, Barbera, berries beginning to touch	Pericarp, Barbera, soft berries	Pericarp, Barbera, Ripe for harvest	Pericarp, Negroamaro, pea-sized berry	Pericarp, Negroamaro, berries beginning to touch	Pericarp, Negroamaro, soft berries	Pericarp, Negroamaro, Ripe for harvest	Pericarp, Primitivo, pea-sized berry	Pericarp, Primitivo, berries beginning to touch	Pericarp, Primitivo, soft berries	Pericarp, Primitivo, Ripe for harvest	Pericarp, Refosco, pea-sized berry	Pericarp, Refosco, berries beginning to touch	Pericarp, Refosco, soft berries	Pericarp, Refosco, Ripe for harvest	Pericarp, Sangiovese, pea-sized berry	Pericarp, Sangiovese, berries beginning to touch	Pericarp, Sangiovese, soft berries	Pericarp, Sangiovese, Ripe for harvest	Seed, green berry stage	Seed, 1 week after flowering	Seed, seeded grape	Seed, seedless grape	Seed, 7 weeks after flowering	Seed trace, green berry stage
GSVIVT01000191001	-	-	-	5.18	3.34	-	-1.4	0.49	-	-	-	-	-	-	-	0.04	-	-0.15	-	-	2.31	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-2.56	-0.4	-	0.03	0.59	-0.56	-	-	-1.9	1.32	-	-	-	0.92	-	-	-	-	-	-1.39	-	-0.24	2.27	-
GSVIVT01000192001	-3.56	-	-0.01	5.43	3.3	-3.98	-2.09	0.7	-2.43	-	-2.49	-0.01	-1.32	-	-2.4	-1.57	-1.82	-	-	-	-0.02	-	-1.08	-2.15	-	-	-	-	-	-	-	-	-	-4.61	-	-	-	-	-2.57	-2.67	-	-	-	-	-2.7	-	-4.46	-1.05	-2.88	-0.98	-	-3.81	-	-	-4.79	-	-	-	-	-0.36	-	-	-	-	-	-3.41	-3.88	-0.88	2.67	-4.18
GSVIVT01000935001	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
GSVIVT01001604001	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
GSVIVT01001614001	-	-	-	-	5.62	-	3.06	-	-	-	-	-	-	-	-	-	-	-	-	-	2.94	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	2.25	-	-	-	-
GSVIVT01004746001	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
GSVIVT01007532001	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
GSVIVT01009541001	-	-	-	2.89	-	-1.24	-1.28	-0.97	-	-	-	-	-	-	-	-	-	1.0	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-0.51	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.42	-	-	-	-	-	-	-	5.8	-	-
GSVIVT01010063001	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
GSVIVT01012391001	-1.22	-	-	4.43	4.53	2.05	-0.18	-0.52	-	-	-	-	-	-	-	-	-	0.44	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-0.11	-	-	-	0.55	-	-	-	-	-	-	-	-0.93	-	-	-	-	-	-	-	-	-	-	-0.54	-	3.82
GSVIVT01012392001	-1.35	-	-	4.12	3.97	1.7	1.36	-	-	-	-0.61	-	-	-0.57	-	0.29	-	-	-	-	-1.26	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-2.69	1.5	-1.66	-	-	1.2	-1.7	-	-1.95	-3.17	-2.51	-	-	-2.25	-	-	-1.44	-2.5	-2.39	-	-	-	-2.95	-	0.28	-	4.25
GSVIVT01012528001	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
GSVIVT01012746001	-2.98	-5.44	-2.78	-0.35	3.67	2.03	2.12	-3.31	-	-2.15	-0.66	-	-	-4.6	-3.6	-1.75	-	-3.93	-	-	4.83	-	-0.15	-1.1	-2.2	-4.09	-3.72	-4.46	-5.13	-4.12	-4.6	-2.02	-	-3.63	-2.51	-2.08	-0.81	-0.63	-1.28	0.63	-6.11	-6.63	-	-4.8	-1.11	-	-2.89	0.89	-4.78	-5.72	-3.5	1.51	-	-	-4.34	-1.35	-5.52	-	-5.58	2.49	-	-	-	-4.46	-	-3.59	-4.34	-5.09	-2.49	-
GSVIVT01012882001	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
GSVIVT01014953001	-1.18	-0.07	-	3.25	1.29	1.91	1.58	-1.19	-	-	-	-1.32	-	-0.91	-	-	-	-	-2.11	-	-	-2.63	-	-	-	-	-	-3.89	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	2.15	-2.94	-2.79	-1.33	2.29	-2.03	-3.22	-1.91	0.74	1.15	0.07	-	0.71	-2.15	-1.1	-	2.24	-0.32	-	-0.18	-3.17	-0.31	0.78	1.45	4.14	-0.26
GSVIVT01014963001	-6.4	-	-	-4.14	-	-1.32	-0.43	-0.33	-	-	-	-	-	-	-	-	-	-	-1.09	-	0.28	0.27	1.13	1.31	0.49	0.21	0.86	0.87	-1.07	-2.47	-2.23	-2.15	0.64	0.81	1.02	1.54	-1.82	-1.3	-1.21	0.79	0.39	0.54	0.18	0.9	-0.79	0.14	1.71	1.57	-1.66	-1.69	-0.14	1.64	-1.09	1.58	0.87	-0.84	-1.51	0.1	-0.2	0.59	-1.08	0.71	-1.01	-0.06	-1.67	-3.21	2.88	-1.68	1.11	-2.02
GSVIVT01015612001	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
GSVIVT01017186001	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
GSVIVT01017203001	-	-	-	2.52	-	2.5	3.0	1.7	-	-	-	-	-	-	-	-	-	-	1.54	-	1.27	-	-	-	-	-	-	-0.01	-	-	1.03	1.13	-	-	-	-	-	0.96	1.11	-	-	0.63	-	-	2.0	-	-	-	-	-	-	2.49	-	-	-	-	-	-	-	3.12	2.76	1.24	-	1.05	-	0.74	-	-	-	-
GSVIVT01018137001	1.06	-4.95	-3.9	0.15	3.91	-1.96	-2.29	1.46	-	-2.22	-1.78	-0.97	-4.97	-3.68	-2.46	-2.17	-3.5	-	-4.96	-6.54	4.12	-6.98	-0.42	-2.34	-2.02	-4.54	-3.37	-3.92	-3.74	-2.14	-3.14	-0.87	-7.71	-2.22	-1.5	0.0	-2.23	-0.57	-0.15	1.61	-7.98	-5.91	-4.6	-2.81	-3.35	-	-2.61	0.39	-5.37	-6.64	-5.81	1.79	-3.3	-5.59	-0.67	-5.08	-5.15	-	-4.56	1.45	-1.19	-3.91	-3.3	2.61	-	0.72	-1.03	-0.86	1.23	-7.24
GSVIVT01018139001	0.41	-	-4.49	0.24	3.81	-2.5	-2.2	3.37	-4.24	-3.08	-0.87	-0.91	-	-5.4	-	-	-	-3.58	-6.6	-6.71	4.51	-6.91	-1.45	-2.8	-2.35	-3.34	-2.33	-3.48	-	-7.44	-	-6.72	-3.5	-0.87	-0.54	0.68	-	-7.53	-	-3.82	-	-7.55	-	-	-2.91	-5.97	-2.16	0.96	-	-	-	1.64	-3.04	-6.42	-1.84	-	-4.29	-	-4.81	1.79	-1.69	-4.23	-2.11	1.34	-	-1.74	-0.6	-2.34	-0.41	-7.37
GSVIVT01021330001	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	6.13	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
GSVIVT01021734001	-1.39	-	0.01	2.28	5.07	-2.11	-2.27	2.23	-1.56	-3.28	-0.87	-0.73	-1.62	-0.56	-2.13	0.96	-	-	-2.87	-	2.84	-4.8	-2.24	-4.45	-2.42	-5.12	-2.92	-4.05	-2.31	-4.18	-5.07	-1.92	-	-5.32	-	-3.42	-3.66	-0.85	-2.65	-1.27	-4.06	-4.38	-	-	-2.39	-	-4.48	1.19	-5.57	-	-5.31	-0.31	-	-	-1.12	-2.84	-3.78	-	-	1.5	-3.93	-4.86	-	-3.39	-	1.08	-1.75	-2.52	-1.02	-2.13
GSVIVT01022123001	-3.97	-	-1.0	4.52	1.07	1.64	1.78	0.09	-0.84	0.62	-	-	1.26	-	-	-	0.38	-1.16	-	-2.13	0.06	-	-	-	-	-	-	-	-	-	-	-	-	-3.34	-	-	-	-	-	-	-	-	-	-	0.86	-	-	-0.8	2.05	1.5	-	1.44	-2.51	-	-	-	-	-	-	3.43	-1.13	-	-	-	-	-2.22	-2.16	2.36	-3.04	-
GSVIVT01022699001	-1.63	-	-	3.18	4.59	0.0	-1.86	-	-	-	-	-	-	-	-	-	-	-	-	-1.5	4.42	-	-0.86	-	-2.43	-2.39	-3.33	-	-1.39	-2.24	-	-	-	-0.79	-1.2	-1.45	-	-2.33	-2.06	-0.86	-	-2.54	-2.32	-	-2.0	-	-2.94	-0.62	-	-	-	0.69	-	-	-	-2.63	-	-	-	2.11	-	-	-	-1.1	-	-	-0.08	-1.68	-1.41	-
GSVIVT01022702001	-1.6	-	-	1.63	3.76	-0.11	-1.41	-1.25	-	-	-2.88	-3.21	-	-1.23	-1.2	0.21	-	-	-4.14	-4.11	5.14	-	-1.49	-	-3.79	-	-5.32	-4.66	-3.29	-3.38	-	-4.13	-5.06	-5.32	-	-2.79	-2.63	-2.95	-4.96	-2.2	-	-4.83	-4.93	-3.0	-	-	-2.74	-0.15	-	-	-3.05	1.37	-	-	-1.67	-3.31	-	-	-4.75	2.01	-	-	-3.41	-1.48	-	-3.16	0.55	-2.57	0.63	-
GSVIVT01022712001	-1.77	-	-	4.32	4.02	-0.24	-0.36	-0.61	-	-0.4	-	-2.26	-3.38	-2.87	-	-1.01	-	-	-	-	3.85	-	-0.52	-2.95	-3.26	-3.94	-4.19	-2.56	-5.05	-1.05	-2.47	-3.37	-4.09	-	-4.03	-1.44	-1.97	-2.21	-2.2	-1.03	-	-3.62	-3.0	-1.21	-4.83	-	-	-0.31	-	-	-	2.14	-4.63	-	-1.03	-2.63	-	-	-	1.81	-	-	-	-	-	-1.15	-1.47	-3.34	-0.82	-
GSVIVT01024849001	-3.53	-4.3	-4.12	3.41	2.77	-0.16	0.31	-1.7	-2.91	-2.05	-2.97	-3.73	-1.6	-1.59	-2.31	-1.61	-1.68	-1.81	-2.21	-1.22	2.18	1.17	0.91	-0.6	-1.12	-0.41	-0.52	-1.56	-0.09	-0.87	-0.88	-1.23	-0.56	-0.39	-0.72	-0.73	0.9	1.07	1.32	1.62	0.52	0.75	0.69	0.13	0.44	-1.24	-3.33	-0.44	-1.17	-2.87	-3.3	0.46	-1.12	-2.57	-3.42	-2.5	-0.39	-0.34	-5.88	-0.03	-0.98	-2.39	-5.51	-0.48	-	-0.69	-4.63	-1.44	2.06	-2.7
GSVIVT01025925001	-4.21	-4.94	-1.64	2.02	2.28	0.38	0.91	-0.16	-2.48	-1.29	-	-2.87	-3.93	-1.15	-2.47	-0.81	-1.53	-0.81	-4.79	-2.22	3.83	-1.19	-2.3	-2.81	-4.45	-2.33	-3.49	-2.75	-3.23	-4.29	-3.51	-3.32	-5.72	-3.33	-1.2	-3.17	-3.89	-4.63	-4.03	-2.28	-4.97	-1.28	-	-2.65	3.34	0.31	-2.81	-0.86	2.46	0.55	-5.77	-2.05	1.22	-0.66	-4.17	-4.3	1.59	-0.51	-	0.29	1.72	-0.85	-4.06	-5.35	-4.84	-2.36	-2.81	1.13	0.57	-0.44
GSVIVT01026602001	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
GSVIVT01029483001	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
GSVIVT01031145001	-1.45	-	-3.58	3.31	4.32	2.0	2.28	-3.89	-	-	-	-	-3.87	-1.24	-2.4	-0.56	-	-3.78	-	-4.47	4.58	-	-	-3.24	-	-	-	-	-4.53	-	-	-	-	-	-	-	-	-	-5.56	-4.5	-	-	-	-	-	-5.59	-	-4.74	-0.43	-4.42	-	-3.73	-1.21	-	-5.55	-5.98	0.03	-	-	-3.58	-0.73	-	-	-	-4.37	-3.48	-	-1.85	0.72	-
GSVIVT01031585001	-	-	-	-	-	-	0.76	3.59	-	-	-	-	-	-	-	3.36	-	-	-	-	-	-	-	-	-	-	0.38	-	-	-	-	-	-	-	-	-	1.36	1.38	-	-	-	-	-	-	-	-	-	-	2.62	-	-	-	0.89	-	-	-	-	-	-	-	-	-	-	-	-	0.93	-	2.09	4.3	2.52
GSVIVT01031614001	-	-	-2.31	3.81	3.7	0.24	3.49	2.28	0.66	-1.28	-	0.04	-0.03	-0.56	-0.55	-0.7	1.09	0.32	-	-1.34	1.34	-2.35	-	-	-2.81	-	-	-4.28	-2.66	-2.59	-	-3.54	-3.25	-2.01	-2.66	-4.48	-2.6	-2.0	-	-	-4.65	-	-	-	0.63	-3.35	-4.88	-1.95	-0.74	-0.37	-3.32	-2.28	-0.43	-1.07	-3.25	-4.3	-0.03	-1.47	-	-3.9	-0.44	-2.97	-	-	-	-0.43	-3.6	0.54	-	0.92
GSVIVT01031815001	-5.27	-	-0.58	3.03	4.54	-1.89	-0.72	-2.03	-	-	-	-	-	-	-	-4.23	-	-	-0.99	-	3.52	-0.15	2.14	2.91	-0.57	-0.82	-1.18	-0.9	-0.52	-0.79	-2.16	-2.03	-3.08	-3.71	-3.9	-4.04	-0.22	-0.03	-1.06	0.22	-4.92	-5.24	-5.19	-5.23	-1.98	-	-2.51	-0.65	-3.15	-6.25	-6.38	-1.18	-1.78	-5.26	-4.7	-2.13	-2.92	-4.87	-6.35	-2.25	-1.67	-	-	-	-5.32	-4.29	-5.38	-3.49	-0.27	-4.06
GSVIVT01031820001	-3.82	-7.85	0.7	4.39	3.71	-0.45	0.27	-2.02	-	-	-	-2.84	-	-	-6.02	-5.17	-	-4.78	-	-5.5	4.06	-1.59	-0.06	-2.09	-1.28	-3.26	-2.8	-3.4	-5.26	-5.33	-3.76	-2.69	-5.94	-4.5	-4.06	-2.83	-0.02	-0.16	0.15	1.49	-3.95	-4.55	-3.91	-3.09	0.43	-	-2.92	-0.84	-2.14	-7.18	-4.84	-1.15	-1.08	-3.97	-6.58	-3.26	-1.34	-	-	-2.51	-0.94	-5.5	-	-4.14	-7.67	-4.06	-6.34	-0.92	-1.43	-0.58
GSVIVT01035201001	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
GSVIVT01038032001	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.