Heatmap: Cluster_221 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00001p00272630 (evm_27.TU.AmTr_v1.0_scaffold00001.547)
- 2.1 - 2.83 -0.37 - - -1.04 - - - - - - - - - 1.74 - - 2.58 -
AMTR_s00001p00272690 (evm_27.TU.AmTr_v1.0_scaffold00001.553)
- - - 3.35 0.06 - - 0.98 - - - - - - -3.17 - - - - -4.07 3.11 -
AMTR_s00002p00154950 (evm_27.TU.AmTr_v1.0_scaffold00002.124)
- -0.47 - 2.34 0.93 - -1.84 1.58 -1.14 -1.28 - -1.72 -0.41 -1.11 -1.29 - -3.17 - -3.89 -3.45 2.95 -2.02
AMTR_s00004p00209040 (evm_27.TU.AmTr_v1.0_scaffold00004.210)
-3.04 -3.6 - 2.5 -2.19 -0.87 -4.12 2.05 -5.6 -4.23 -3.94 -3.44 -4.34 -5.16 -1.26 -3.63 -3.55 -5.96 -4.61 -3.29 3.32 -2.77
AMTR_s00004p00262100 (evm_27.TU.AmTr_v1.0_scaffold00004.259)
- - - 3.12 2.32 - - - - - - - - - - - - - - - 3.06 -
AMTR_s00005p00235450 (evm_27.TU.AmTr_v1.0_scaffold00005.116)
- - - 3.39 1.89 - - - - - - - -4.23 -2.43 - - - - - -2.45 2.83 -1.64
AMTR_s00008p00159260 (evm_27.TU.AmTr_v1.0_scaffold00008.79)
- - - 2.86 1.47 - -5.56 0.82 - -5.56 - - -3.67 -6.08 -2.76 -1.67 - - - -4.22 3.25 -4.92
AMTR_s00011p00232490 (evm_27.TU.AmTr_v1.0_scaffold00011.115)
- - - 2.8 0.9 - - 1.92 -6.41 - - - -4.51 - -4.97 - - - - -5.84 3.22 -
AMTR_s00012p00178170 (evm_27.TU.AmTr_v1.0_scaffold00012.111)
1.73 - - 2.63 -0.99 - -6.34 - -4.3 -4.46 1.01 -0.17 -0.49 -0.99 -1.61 0.27 0.38 -0.1 -0.23 -0.8 0.97 -0.7
AMTR_s00016p00028570 (evm_27.TU.AmTr_v1.0_scaffold00016.11)
- - - 3.41 - - - - - - - - - - -4.16 - -0.06 - - - 3.31 -1.29
AMTR_s00017p00027420 (evm_27.TU.AmTr_v1.0_scaffold00017.9)
- - - 3.13 -0.88 - - 1.88 - - -4.45 -1.71 -4.1 -2.67 -2.29 - - -0.9 - -1.45 2.88 -5.55
AMTR_s00019p00191800 (evm_27.TU.AmTr_v1.0_scaffold00019.213)
-0.3 - - 2.71 -0.75 - -5.94 3.2 - - - - -5.07 -6.41 -4.43 - - - - -3.8 2.23 -7.06
AMTR_s00022p00218930 (evm_27.TU.AmTr_v1.0_scaffold00022.264)
1.16 - - 2.71 1.43 - - - -4.15 - -1.07 0.68 -2.61 - -0.87 - - - - - 2.91 -2.6
AMTR_s00027p00071710 (evm_27.TU.AmTr_v1.0_scaffold00027.16)
- 0.73 - 3.4 0.84 - - 1.19 -2.81 -2.66 - - -0.51 -1.06 -0.65 - -2.54 -1.68 -2.84 0.11 0.17 -0.41
AMTR_s00036p00143810 (evm_27.TU.AmTr_v1.0_scaffold00036.66)
- - - 2.59 1.45 - - - 1.34 -1.78 -0.78 0.96 -3.25 -2.61 -4.05 - -0.17 - - -3.1 2.62 -1.21
AMTR_s00039p00124610 (evm_27.TU.AmTr_v1.0_scaffold00039.78)
- - - 3.42 0.93 - - 2.18 - - - - - - - - - - - - 2.29 -
AMTR_s00047p00078070 (evm_27.TU.AmTr_v1.0_scaffold00047.22)
- - - 3.1 - - - - -6.09 - 0.91 0.54 -2.14 -0.96 -3.23 0.57 0.62 0.67 -0.76 -0.21 1.37 -0.84
AMTR_s00053p00135830 (evm_27.TU.AmTr_v1.0_scaffold00053.85)
- - - 2.72 0.65 - -4.14 - -5.25 -5.57 0.17 1.47 0.24 -2.09 -1.22 -1.68 -0.57 0.02 -0.82 -2.06 2.35 -3.56
AMTR_s00054p00201020 (evm_27.TU.AmTr_v1.0_scaffold00054.80)
-0.88 -4.97 -1.31 3.18 -0.28 - -5.57 - - - -0.06 -1.88 -1.17 -1.03 -1.69 - 1.01 -2.07 -0.79 -0.42 2.24 -1.46
AMTR_s00055p00185650 (evm_27.TU.AmTr_v1.0_scaffold00055.112)
- - - 3.38 -2.97 - - - - -1.27 - - -1.23 -0.72 -0.44 - - - - -1.08 2.91 0.32
AMTR_s00058p00055620 (evm_27.TU.AmTr_v1.0_scaffold00058.24)
- 0.22 -0.21 3.04 -1.31 - - -1.54 -6.28 - - - -7.49 - - - - - - -5.47 3.45 -
- - - 3.52 0.28 - -2.38 - -2.75 - - - -3.18 -2.33 -2.16 - 0.9 - - - 2.72 -
AMTR_s00065p00126490 (evm_27.TU.AmTr_v1.0_scaffold00065.79)
-0.74 0.29 -0.04 2.35 0.98 - -3.69 0.98 -2.07 -2.63 -2.12 -1.5 -0.77 0.19 0.56 -3.02 -1.23 -0.91 -1.04 0.35 1.25 -0.6
AMTR_s00087p00180310 (evm_27.TU.AmTr_v1.0_scaffold00087.56)
-2.16 - - 3.03 0.41 - - -0.24 - - - - - - -3.26 - - - - - 3.5 -
AMTR_s00093p00061750 (evm_27.TU.AmTr_v1.0_scaffold00093.10)
- - - 2.88 -2.24 - 0.26 - 1.18 0.45 - - - -0.71 -4.1 - -1.28 - - - 3.09 -
-0.42 -1.18 -0.79 2.57 0.17 -1.88 - 1.11 -9.39 - - - -6.1 -4.63 -6.07 -3.0 -6.16 - - -2.31 3.37 -6.73
AMTR_s00105p00062730 (evm_27.TU.AmTr_v1.0_scaffold00105.28)
- - - 3.4 -2.52 - - -4.1 - - -0.5 -1.54 -2.34 -2.1 -3.53 0.22 -1.64 -0.73 -0.42 -0.33 2.5 -1.68
AMTR_s00124p00016700 (evm_27.TU.AmTr_v1.0_scaffold00124.1)
- - - 3.16 0.13 - - 1.82 -1.71 -1.64 - - -0.8 -1.42 -1.13 - - - - - 2.55 -0.79
AMTR_s00130p00076680 (evm_27.TU.AmTr_v1.0_scaffold00130.33)
0.81 - 1.14 2.48 -2.81 -4.76 -4.44 -8.45 -3.04 -3.61 0.61 0.6 -0.2 -0.73 -0.96 -0.8 0.06 -0.13 -0.94 -0.11 1.05 -0.07
AMTR_s00130p00119390 (evm_27.TU.AmTr_v1.0_scaffold00130.66)
-0.83 0.12 - 2.28 -0.05 - -5.65 2.89 -4.62 -4.21 -1.18 - -1.25 -2.26 -1.87 - -1.91 - - -1.6 2.29 -2.35
AMTR_s00139p00061330 (evm_27.TU.AmTr_v1.0_scaffold00139.14)
- - - 4.0 -1.68 - - 2.02 - - - - -4.79 - - - - - - - 0.73 -
AMTR_s00142p00045990 (evm_27.TU.AmTr_v1.0_scaffold00142.25)
- - - 2.56 0.13 - -3.57 1.34 -0.43 -1.4 0.37 - -0.17 -0.52 0.28 - - 1.01 0.03 -2.3 1.85 -1.55
AMTR_s00145p00068020 (evm_27.TU.AmTr_v1.0_scaffold00145.23)
- - - 3.02 -2.71 - -3.24 - 0.24 -0.93 1.78 0.54 -1.11 -0.71 -1.55 -1.02 0.5 - - -0.77 1.51 -1.99
AMTR_s00155p00016930 (evm_27.TU.AmTr_v1.0_scaffold00155.6)
- - - 2.84 -1.56 - -5.07 - -4.06 -6.26 -0.58 -0.22 -0.48 0.28 -0.1 -0.78 -1.43 -0.09 0.09 0.58 2.19 -0.04
AMTR_s00274p00013110 (evm_27.TU.AmTr_v1.0_scaffold00274.3)
- - - 2.85 0.78 - -3.76 1.9 - - - - - -3.69 -1.75 - - - - -2.95 3.11 -2.85
-0.37 - - 3.55 -0.65 - - 1.03 - - -2.51 - -4.16 -3.53 -1.68 -0.33 - - -0.94 -2.41 2.21 -3.57
AMTR_s00334p00011840 (evm_27.TU.AmTr_v1.0_scaffold00334.3)
-3.33 -3.24 -3.02 3.22 -2.22 -6.22 -8.88 -1.49 -9.08 -8.84 -6.5 -8.47 -5.99 -5.63 -5.81 -3.94 -4.11 -5.85 -6.37 -3.9 3.52 -6.37
AMTR_s00514p00011690 (evm_27.TU.AmTr_v1.0_scaffold00514.2)
- - 0.73 2.64 -0.38 - - 2.0 - - - - - - -2.77 - - - - - 3.2 -
AMTR_s02071p00000020 (evm_27.TU.AmTr_v1.0_scaffold02071.1)
0.83 0.61 1.05 2.28 1.04 -0.37 -12.71 0.45 -12.0 -10.47 -6.3 -7.65 -8.42 -7.59 -6.23 -6.77 -5.18 -7.32 -7.16 -5.99 2.9 -8.39
AMTR_s02393p00009230 (evm_27.TU.AmTr_v1.0_scaffold02393.1)
- -0.79 - 2.95 - - - 0.33 - - - - - - - - - - - - 3.63 -
AMTR_s03283p00005470 (evm_27.TU.AmTr_v1.0_scaffold03283.1)
0.31 -0.73 0.42 2.84 0.07 -4.61 -11.78 -0.4 -8.97 -9.81 -8.58 -6.08 -7.51 -6.66 -5.89 -5.8 -5.73 -6.59 -6.44 -5.66 3.28 -7.16
AMTR_s03511p00002160 (evm_27.TU.AmTr_v1.0_scaffold03511.1)
- - - 3.19 -2.18 - - - - - - 0.37 -6.79 - - - - -1.83 -1.98 -2.77 3.41 -6.68
AMTR_s04307p00000800 (evm_27.TU.AmTr_v1.0_scaffold04307.1)
- - - 3.5 0.08 - - -4.62 - -6.28 - - -5.12 -5.34 -3.38 - - - - -5.25 3.23 -5.52
AMTR_s04400p00006200 (evm_27.TU.AmTr_v1.0_scaffold04400.1)
- - - 3.33 1.66 - - 2.54 - - - - - - -2.9 - - - - - 1.5 -
AMTR_s04480p00003730 (evm_27.TU.AmTr_v1.0_scaffold04480.1)
- - - 3.36 -4.37 - - - - - - -8.33 -3.68 -23.05 - - - -7.43 -12.78 -2.22 3.5 -4.37
AMTR_s05347p00001480 (evm_27.TU.AmTr_v1.0_scaffold05347.1)
- - - 4.08 -0.07 - - 2.03 - - - - - - - - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.