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Heatmap: Cluster_221 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00001p00272630 (evm_27.TU.AmTr_v1.0_scaffold00001.547)
 0.0 0.22 0.0 0.36 0.04 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.17 0.0 0.0 0.3 0.0
AMTR_s00001p00272690 (evm_27.TU.AmTr_v1.0_scaffold00001.553)
 0.0 0.0 0.0 30.9 3.16 0.0 0.0 6.01 0.0 0.0 0.0 0.0 0.0 0.0 0.34 0.0 0.0 0.0 0.0 0.18 26.22 0.0
AMTR_s00002p00154950 (evm_27.TU.AmTr_v1.0_scaffold00002.124)
 0.0 1.1 0.0 7.73 2.92 0.0 0.43 4.57 0.69 0.63 0.0 0.46 1.15 0.71 0.63 0.0 0.17 0.0 0.1 0.14 11.84 0.38
AMTR_s00004p00209040 (evm_27.TU.AmTr_v1.0_scaffold00004.210)
 5.09 3.47 0.0 236.55 9.22 23.03 2.41 173.69 0.87 2.23 2.73 3.86 2.07 1.17 17.52 3.39 3.59 0.68 1.72 4.27 419.23 6.14
AMTR_s00004p00262100 (evm_27.TU.AmTr_v1.0_scaffold00004.259)
 0.0 0.0 0.0 2.71 1.56 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 2.61 0.0
AMTR_s00005p00235450 (evm_27.TU.AmTr_v1.0_scaffold00005.116)
 0.0 0.0 0.0 4.64 1.64 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02 0.08 0.0 0.0 0.0 0.0 0.0 0.08 3.15 0.14
AMTR_s00008p00159260 (evm_27.TU.AmTr_v1.0_scaffold00008.79)
 0.0 0.0 0.0 8.19 3.12 0.0 0.02 1.99 0.0 0.02 0.0 0.0 0.09 0.02 0.17 0.35 0.0 0.0 0.0 0.06 10.69 0.04
AMTR_s00011p00232490 (evm_27.TU.AmTr_v1.0_scaffold00011.115)
 0.0 0.0 0.0 16.05 4.31 0.0 0.0 8.74 0.03 0.0 0.0 0.0 0.1 0.0 0.07 0.0 0.0 0.0 0.0 0.04 21.51 0.0
AMTR_s00012p00178170 (evm_27.TU.AmTr_v1.0_scaffold00012.111)
 16.84 0.0 0.0 31.36 2.55 0.0 0.06 0.0 0.26 0.23 10.22 4.51 3.61 2.56 1.67 6.1 6.61 4.74 4.31 2.92 9.92 3.12
AMTR_s00016p00028570 (evm_27.TU.AmTr_v1.0_scaffold00016.11)
 0.0 0.0 0.0 4.64 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02 0.0 0.42 0.0 0.0 0.0 4.35 0.18
AMTR_s00017p00027420 (evm_27.TU.AmTr_v1.0_scaffold00017.9)
 0.0 0.0 0.0 33.28 2.07 0.0 0.0 14.0 0.0 0.0 0.17 1.17 0.22 0.6 0.78 0.0 0.0 2.04 0.0 1.39 27.93 0.08
AMTR_s00019p00191800 (evm_27.TU.AmTr_v1.0_scaffold00019.213)
 9.07 0.0 0.0 73.2 6.68 0.0 0.18 102.97 0.0 0.0 0.0 0.0 0.33 0.13 0.52 0.0 0.0 0.0 0.0 0.81 52.47 0.08
AMTR_s00022p00218930 (evm_27.TU.AmTr_v1.0_scaffold00022.264)
 4.37 0.0 0.0 12.84 5.28 0.0 0.0 0.0 0.11 0.0 0.94 3.13 0.32 0.0 1.08 0.0 0.0 0.0 0.0 0.0 14.78 0.32
AMTR_s00027p00071710 (evm_27.TU.AmTr_v1.0_scaffold00027.16)
 0.0 1.6 0.0 10.19 1.72 0.0 0.0 2.19 0.14 0.15 0.0 0.0 0.68 0.46 0.61 0.0 0.17 0.3 0.13 1.04 1.08 0.73
AMTR_s00036p00143810 (evm_27.TU.AmTr_v1.0_scaffold00036.66)
 0.0 0.0 0.0 1.21 0.55 0.0 0.0 0.0 0.51 0.06 0.12 0.39 0.02 0.03 0.01 0.0 0.18 0.0 0.0 0.02 1.24 0.09
AMTR_s00039p00124610 (evm_27.TU.AmTr_v1.0_scaffold00039.78)
 0.0 0.0 0.0 9.93 1.77 0.0 0.0 4.22 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 4.55 0.0
AMTR_s00047p00078070 (evm_27.TU.AmTr_v1.0_scaffold00047.22)
 0.0 0.0 0.0 11.46 0.0 0.0 0.0 0.0 0.02 0.0 2.51 1.95 0.3 0.69 0.14 1.97 2.05 2.13 0.79 1.15 3.44 0.74
AMTR_s00053p00135830 (evm_27.TU.AmTr_v1.0_scaffold00053.85)
 0.0 0.0 0.0 11.12 2.64 0.0 0.1 0.0 0.04 0.04 1.9 4.68 1.98 0.4 0.72 0.53 1.13 1.71 0.96 0.41 8.57 0.14
AMTR_s00054p00201020 (evm_27.TU.AmTr_v1.0_scaffold00054.80)
 1.08 0.06 0.81 18.08 1.64 0.0 0.04 0.0 0.0 0.0 1.91 0.54 0.89 0.98 0.62 0.0 4.02 0.48 1.15 1.49 9.41 0.73
AMTR_s00055p00185650 (evm_27.TU.AmTr_v1.0_scaffold00055.112)
 0.0 0.0 0.0 4.4 0.05 0.0 0.0 0.0 0.0 0.17 0.0 0.0 0.18 0.25 0.31 0.0 0.0 0.0 0.0 0.2 3.17 0.53
AMTR_s00058p00055620 (evm_27.TU.AmTr_v1.0_scaffold00058.24)
 0.0 6.84 5.1 48.31 2.38 0.0 0.0 2.03 0.08 0.0 0.0 0.0 0.03 0.0 0.0 0.0 0.0 0.0 0.0 0.13 64.44 0.0
0.0 0.0 0.0 1.1 0.12 0.0 0.02 0.0 0.01 0.0 0.0 0.0 0.01 0.02 0.02 0.0 0.18 0.0 0.0 0.0 0.63 0.0
AMTR_s00065p00126490 (evm_27.TU.AmTr_v1.0_scaffold00065.79)
 1.59 3.25 2.59 13.58 5.23 0.0 0.21 5.25 0.63 0.43 0.61 0.94 1.56 3.03 3.91 0.33 1.13 1.41 1.29 3.39 6.33 1.75
AMTR_s00087p00180310 (evm_27.TU.AmTr_v1.0_scaffold00087.56)
 0.14 0.0 0.0 5.08 0.83 0.0 0.0 0.52 0.0 0.0 0.0 0.0 0.0 0.0 0.06 0.0 0.0 0.0 0.0 0.0 7.03 0.0
AMTR_s00093p00061750 (evm_27.TU.AmTr_v1.0_scaffold00093.10)
 0.0 0.0 0.0 1.46 0.04 0.0 0.24 0.0 0.45 0.27 0.0 0.0 0.0 0.12 0.01 0.0 0.08 0.0 0.0 0.0 1.69 0.0
31.68 18.62 24.48 250.63 47.68 11.49 0.0 91.13 0.06 0.0 0.0 0.0 0.62 1.7 0.63 5.27 0.59 0.0 0.0 8.55 436.97 0.4
AMTR_s00105p00062730 (evm_27.TU.AmTr_v1.0_scaffold00105.28)
 0.0 0.0 0.0 9.21 0.15 0.0 0.0 0.05 0.0 0.0 0.61 0.3 0.17 0.2 0.08 1.01 0.28 0.52 0.65 0.69 4.94 0.27
AMTR_s00124p00016700 (evm_27.TU.AmTr_v1.0_scaffold00124.1)
 0.0 0.0 0.0 0.5 0.06 0.0 0.0 0.2 0.02 0.02 0.0 0.0 0.03 0.02 0.03 0.0 0.0 0.0 0.0 0.0 0.33 0.03
AMTR_s00130p00076680 (evm_27.TU.AmTr_v1.0_scaffold00130.33)
 6.98 0.0 8.74 22.16 0.57 0.15 0.18 0.01 0.48 0.33 6.08 6.02 3.47 2.4 2.04 2.29 4.14 3.63 2.08 3.69 8.26 3.8
AMTR_s00130p00119390 (evm_27.TU.AmTr_v1.0_scaffold00130.66)
 2.41 4.66 0.0 20.77 4.14 0.0 0.09 31.77 0.17 0.23 1.89 0.0 1.81 0.9 1.18 0.0 1.14 0.0 0.0 1.42 20.99 0.84
AMTR_s00139p00061330 (evm_27.TU.AmTr_v1.0_scaffold00139.14)
 0.0 0.0 0.0 27.13 0.53 0.0 0.0 6.88 0.0 0.0 0.0 0.0 0.06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 2.82 0.0
AMTR_s00142p00045990 (evm_27.TU.AmTr_v1.0_scaffold00142.25)
 0.0 0.0 0.0 1.19 0.22 0.0 0.02 0.51 0.15 0.08 0.26 0.0 0.18 0.14 0.25 0.0 0.0 0.41 0.21 0.04 0.73 0.07
AMTR_s00145p00068020 (evm_27.TU.AmTr_v1.0_scaffold00145.23)
 0.0 0.0 0.0 30.81 0.58 0.0 0.4 0.0 4.48 2.0 13.06 5.52 1.76 2.32 1.29 1.87 5.37 0.0 0.0 2.23 10.84 0.95
AMTR_s00155p00016930 (evm_27.TU.AmTr_v1.0_scaffold00155.6)
 0.0 0.0 0.0 16.4 0.77 0.0 0.07 0.0 0.14 0.03 1.53 1.97 1.64 2.77 2.14 1.33 0.85 2.15 2.44 3.42 10.44 2.22
AMTR_s00274p00013110 (evm_27.TU.AmTr_v1.0_scaffold00274.3)
 0.0 0.0 0.0 6.72 1.6 0.0 0.07 3.48 0.0 0.0 0.0 0.0 0.0 0.07 0.28 0.0 0.0 0.0 0.0 0.12 8.04 0.13
2.22 0.0 0.0 33.78 1.83 0.0 0.0 5.87 0.0 0.0 0.51 0.0 0.16 0.25 0.9 2.29 0.0 0.0 1.5 0.54 13.3 0.24
AMTR_s00334p00011840 (evm_27.TU.AmTr_v1.0_scaffold00334.3)
 5.68 6.04 7.04 531.36 12.23 0.77 0.12 20.4 0.11 0.12 0.63 0.16 0.9 1.16 1.02 3.72 3.31 0.99 0.69 3.83 656.39 0.69
AMTR_s00514p00011690 (evm_27.TU.AmTr_v1.0_scaffold00514.2)
 0.0 0.0 1.64 6.16 0.76 0.0 0.0 3.95 0.0 0.0 0.0 0.0 0.0 0.0 0.14 0.0 0.0 0.0 0.0 0.0 9.06 0.0
AMTR_s02071p00000020 (evm_27.TU.AmTr_v1.0_scaffold02071.1)
 1563.44 1340.35 1818.51 4267.82 1812.75 678.95 0.13 1203.37 0.22 0.62 11.19 4.39 2.58 4.58 11.7 8.06 24.32 5.49 6.18 13.86 6588.16 2.62
AMTR_s02393p00009230 (evm_27.TU.AmTr_v1.0_scaffold02393.1)
 0.0 0.33 0.0 4.41 0.0 0.0 0.0 0.71 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 7.07 0.0
AMTR_s03283p00005470 (evm_27.TU.AmTr_v1.0_scaffold03283.1)
 622.09 302.85 673.37 3599.6 526.76 20.56 0.14 381.69 1.0 0.56 1.31 7.44 2.76 4.99 8.47 9.06 9.48 5.21 5.8 9.97 4873.44 3.52
AMTR_s03511p00002160 (evm_27.TU.AmTr_v1.0_scaffold03511.1)
 0.0 0.0 0.0 8.7 0.21 0.0 0.0 0.0 0.0 0.0 0.0 1.23 0.01 0.0 0.0 0.0 0.0 0.27 0.24 0.14 10.15 0.01
AMTR_s04307p00000800 (evm_27.TU.AmTr_v1.0_scaffold04307.1)
 0.0 0.0 0.0 54.98 5.14 0.0 0.0 0.2 0.0 0.06 0.0 0.0 0.14 0.12 0.47 0.0 0.0 0.0 0.0 0.13 45.54 0.11
AMTR_s04400p00006200 (evm_27.TU.AmTr_v1.0_scaffold04400.1)
 0.0 0.0 0.0 46.09 14.44 0.0 0.0 26.56 0.0 0.0 0.0 0.0 0.0 0.0 0.61 0.0 0.0 0.0 0.0 0.0 12.96 0.0
AMTR_s04480p00003730 (evm_27.TU.AmTr_v1.0_scaffold04480.1)
 0.0 0.0 0.0 8.89 0.04 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.07 0.0 0.0 0.0 0.0 0.01 0.0 0.19 9.85 0.04
AMTR_s05347p00001480 (evm_27.TU.AmTr_v1.0_scaffold05347.1)
 0.0 0.0 0.0 16.21 0.91 0.0 0.0 3.9 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)