Heatmap: Cluster_272 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00002p00049830 (evm_27.TU.AmTr_v1.0_scaffold00002.20)
- - - - 3.71 - - - -0.11 - - - -0.22 0.41 1.58 - - - - 0.58 - 0.39
AMTR_s00002p00144970 (evm_27.TU.AmTr_v1.0_scaffold00002.107)
- - - - 4.04 - - - -3.72 -2.95 - - -3.25 - 0.07 - - - - - 2.05 -
AMTR_s00002p00272170 (evm_27.TU.AmTr_v1.0_scaffold00002.668)
- - - - 3.64 - - - -2.66 - - - 0.34 -3.01 -0.52 1.6 1.03 - 0.99 -2.0 - -
AMTR_s00003p00251040 (evm_27.TU.AmTr_v1.0_scaffold00003.295)
- - - -0.39 3.38 - - - - - -1.21 0.57 -2.39 -3.04 -1.51 - -0.48 - - -2.46 2.81 -1.6
AMTR_s00007p00259230 (evm_27.TU.AmTr_v1.0_scaffold00007.317)
- - - - 3.7 - -4.47 - -4.91 -3.27 -1.53 - -0.34 0.77 0.78 - 0.29 - - -1.0 1.0 -0.92
AMTR_s00009p00215900 (evm_27.TU.AmTr_v1.0_scaffold00009.150)
- - - -1.51 3.83 - - - -1.29 -1.45 -0.41 - -1.99 - 1.26 - 0.78 - -0.02 -1.6 - -2.27
AMTR_s00010p00121370 (evm_27.TU.AmTr_v1.0_scaffold00010.76)
- - - - 4.19 - - - 0.64 - - - - - 1.14 - - - - - - -
AMTR_s00012p00222300 (evm_27.TU.AmTr_v1.0_scaffold00012.169)
- - - -6.02 3.54 - -4.13 - -4.89 -4.52 0.2 -2.15 0.5 -2.29 0.65 -1.71 -0.59 -1.34 0.47 0.16 0.51 -1.38
AMTR_s00018p00116900 (evm_27.TU.AmTr_v1.0_scaffold00018.52)
- - - - 4.15 - - - - - - - - - - - 2.07 - - - - -
AMTR_s00019p00130890 (evm_27.TU.AmTr_v1.0_scaffold00019.111)
- - - - 4.18 - - - - 0.95 - - - - 0.94 - - - - - - -
AMTR_s00023p00058970 (evm_27.TU.AmTr_v1.0_scaffold00023.26)
- - - - 4.27 - - - - - - - - - 1.42 - - - - - - -
AMTR_s00028p00209420 (evm_27.TU.AmTr_v1.0_scaffold00028.100)
- - - - 4.22 - - - - - - - -0.36 - 0.43 - - - - 0.38 - -
AMTR_s00030p00237000 (evm_27.TU.AmTr_v1.0_scaffold00030.202)
- - - - 3.74 - - - - - - - - -1.03 1.76 - 1.93 - - - - -0.05
AMTR_s00031p00059180 (evm_27.TU.AmTr_v1.0_scaffold00031.23)
- - - - 4.18 - -5.76 -3.64 -6.19 - - - -5.33 -3.32 1.41 - - - - - -0.2 -3.72
AMTR_s00038p00194660 (evm_27.TU.AmTr_v1.0_scaffold00038.137)
- - - - 3.85 - - - -3.82 -1.77 -1.55 0.2 -1.85 -2.93 -0.5 - -0.94 - - -2.2 1.85 -1.72
AMTR_s00038p00194680 (evm_27.TU.AmTr_v1.0_scaffold00038.139)
- - - - 3.6 - - - -4.94 -1.29 - 1.45 -0.72 -1.34 -0.23 - - - - -1.45 2.1 -2.52
AMTR_s00038p00194690 (evm_27.TU.AmTr_v1.0_scaffold00038.137)
- - - - 3.84 - - - -4.4 -1.58 -1.32 - -1.54 -2.64 -0.47 - -0.04 - - -0.84 1.7 -0.19
AMTR_s00044p00048750 (evm_27.TU.AmTr_v1.0_scaffold00044.23)
- - - - 4.37 - - - - - - - - - - - - - - 0.47 - -
AMTR_s00044p00091920 (evm_27.TU.AmTr_v1.0_scaffold00044.64)
- - - - 3.73 - - - - - - - -3.0 -2.94 -2.31 - - - - - 3.05 -
AMTR_s00050p00022420 (evm_27.TU.AmTr_v1.0_scaffold00050.2)
- - - - 4.13 - - - - -2.06 - - -1.0 - -0.11 - -0.83 - - -2.89 0.81 -1.5
AMTR_s00051p00155030 (evm_27.TU.AmTr_v1.0_scaffold00051.57)
- - - - 4.08 - -1.19 0.43 -2.74 -3.64 - - -2.07 -3.53 0.06 - -0.3 - - -0.89 - -1.46
AMTR_s00052p00149190 (evm_27.TU.AmTr_v1.0_scaffold00052.54)
- - - - 3.4 - -1.89 - -2.54 -2.56 1.14 0.74 -0.29 0.08 0.57 -1.41 -0.57 -1.04 - -1.69 -1.2 0.39
AMTR_s00057p00165000 (evm_27.TU.AmTr_v1.0_scaffold00057.163)
- - - - 4.04 - - - - - - - -1.03 - 1.1 - 1.54 - - - - -
AMTR_s00060p00089550 (evm_27.TU.AmTr_v1.0_scaffold00060.36)
- - - - 3.83 - - - - - - - - -1.4 -1.06 - - - - - 2.8 -
AMTR_s00061p00190500 (evm_27.TU.AmTr_v1.0_scaffold00061.218)
- - - - 4.15 - - - -2.11 -1.47 - - - -1.25 1.7 - - - - - - -
AMTR_s00062p00205800 (evm_27.TU.AmTr_v1.0_scaffold00062.220)
- - - -1.12 3.63 - - - - - - - -3.91 - -3.32 - - - - -0.46 3.02 -2.9
AMTR_s00062p00206110 (evm_27.TU.AmTr_v1.0_scaffold00062.219)
- - - - 3.68 - - - - -3.8 -0.89 - -2.59 - 0.06 - -0.99 0.8 - -2.19 2.23 -1.98
AMTR_s00066p00146820 (evm_27.TU.AmTr_v1.0_scaffold00066.148)
- - - - 3.66 - - - -2.17 - - - -3.01 -2.62 -0.23 - - - - - 2.96 -2.08
AMTR_s00070p00200820 (evm_27.TU.AmTr_v1.0_scaffold00070.137)
- - - - 3.94 - - - -4.06 -4.57 -0.15 0.63 - - -0.52 - 1.34 - -0.54 -3.48 - -3.31
AMTR_s00071p00164360 (evm_27.TU.AmTr_v1.0_scaffold00071.162)
- -3.46 - -1.15 3.32 0.36 -3.84 0.08 -1.6 -2.21 -0.45 - -0.59 -0.54 0.3 - 0.62 - - -0.07 1.03 -0.6
AMTR_s00073p00179890 (evm_27.TU.AmTr_v1.0_scaffold00073.58)
-0.85 - - -1.5 3.58 - - - - - -1.6 - -1.41 -0.88 1.84 - -0.88 -0.01 -1.17 0.66 - -0.5
AMTR_s00074p00187130 (evm_27.TU.AmTr_v1.0_scaffold00074.110)
- - - - 4.01 - -0.33 - -0.89 -0.36 -0.49 - -1.04 -2.17 -0.44 - 0.16 - -1.83 -2.12 - -
AMTR_s00085p00181210 (evm_27.TU.AmTr_v1.0_scaffold00085.115)
- - - - 4.0 - - - - - - - - - -1.05 - - - - - 2.45 -
AMTR_s00092p00153620 (evm_27.TU.AmTr_v1.0_scaffold00092.125)
- - - - 3.7 - -1.06 - -0.11 0.63 - - -2.88 -1.97 2.25 - -1.17 - - - - -1.01
AMTR_s00093p00088560 (evm_27.TU.AmTr_v1.0_scaffold00093.24)
- - - - 4.17 - - - -0.32 - - - - - 1.7 - - - - - - -
AMTR_s00100p00068290 (evm_27.TU.AmTr_v1.0_scaffold00100.14)
- - - - 3.77 - - - - -2.4 - - - - 1.41 - -0.02 - -0.05 - 1.77 -2.65
AMTR_s00102p00031090 (evm_27.TU.AmTr_v1.0_scaffold00102.8)
- - - - 4.21 - - - - -0.93 - - - - -0.96 - - - 1.33 - - -
AMTR_s00106p00149020 (evm_27.TU.AmTr_v1.0_scaffold00106.122)
0.19 - - - 3.88 - - - -3.38 - - - -1.08 -2.47 -0.6 - - - - -1.62 2.08 -2.56
AMTR_s00109p00124990 (evm_27.TU.AmTr_v1.0_scaffold00109.125)
- - - - 3.84 - - - - - - 1.07 -0.08 -0.87 0.03 - -1.06 - - -0.85 0.73 -1.48
AMTR_s00117p00028920 (evm_27.TU.AmTr_v1.0_scaffold00117.6)
- - - - 3.84 - - - - - - - -1.66 -0.69 0.89 - - - - 2.27 - -3.27
AMTR_s00117p00032150 (evm_27.TU.AmTr_v1.0_scaffold00117.7)
- - - - 3.62 - - - - - - - -0.21 -0.45 1.72 - - - - 2.26 - -
AMTR_s00119p00114820 (evm_27.TU.AmTr_v1.0_scaffold00119.89)
- - - - 4.07 - -2.44 - -0.85 -2.11 - - - - 1.58 - - - - -0.18 - -1.47
AMTR_s00130p00118290 (evm_27.TU.AmTr_v1.0_scaffold00130.62)
- - - - 3.66 - - - - -2.34 - - -1.61 -2.26 1.2 - - - - - 2.66 -
AMTR_s00130p00120550 (evm_27.TU.AmTr_v1.0_scaffold00130.72)
- - - - 4.22 - - - - - - - -0.69 - 1.44 - - - - - - -
AMTR_s00140p00041550 (evm_27.TU.AmTr_v1.0_scaffold00140.15)
- - - - 4.22 - -2.82 - -2.66 - - - -1.26 - 1.26 - - - - - - -1.85
AMTR_s00147p00074310 (evm_27.TU.AmTr_v1.0_scaffold00147.35)
- - - - 4.11 - - - - -3.64 - - -1.03 -3.28 1.35 - - - 0.37 -2.55 - -
AMTR_s00148p00067250 (evm_27.TU.AmTr_v1.0_scaffold00148.41)
- - - - 4.34 - - - - - - - -0.04 -0.27 - - - - - - - -
AMTR_s00156p00031630 (evm_27.TU.AmTr_v1.0_scaffold00156.11)
- - - -2.02 3.74 - - - -4.25 -4.07 -1.25 1.47 -3.17 -2.68 1.05 - -1.67 - - -2.72 1.12 -3.42
AMTR_s00170p00056030 (evm_27.TU.AmTr_v1.0_scaffold00170.26)
- - 0.11 - 3.75 - -6.13 - -2.83 -4.1 - - -1.53 -2.01 0.25 - -1.55 - - -3.31 2.12 -0.47
AMTR_s00186p00050260 (evm_27.TU.AmTr_v1.0_scaffold00186.21)
- - - - 4.33 - - - - - - - - - - - - - - 0.89 - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.