Heatmap: Cluster_199 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00001p00260380 (evm_27.TU.AmTr_v1.0_scaffold00001.371)
- -4.51 - 2.56 1.22 - -7.29 2.6 -4.1 -4.07 -2.38 -0.57 -4.08 -4.06 -1.74 - -4.71 -1.76 -1.78 -3.83 2.47 -5.27
- - - 3.06 0.02 - - - - - -0.55 - -2.85 - 0.02 - - - - -15.11 3.43 -
AMTR_s00002p00143250 (evm_27.TU.AmTr_v1.0_scaffold00002.105)
1.02 -3.87 - 1.22 -0.06 - -6.06 - -2.56 -2.87 -0.97 -0.21 0.19 -0.06 -0.62 0.23 -1.34 - 1.15 0.8 2.45 0.24
AMTR_s00009p00195580 (evm_27.TU.AmTr_v1.0_scaffold00009.125)
1.45 -1.52 -0.94 2.64 -1.61 1.6 -4.8 2.54 -3.69 -4.23 -1.91 -2.27 -0.5 -3.21 -1.76 -1.7 -6.22 -1.39 -2.49 -3.25 -3.07 -2.91
AMTR_s00010p00050670 (evm_27.TU.AmTr_v1.0_scaffold00010.24)
- - - 1.56 -2.53 - - - - - - - -1.52 - -1.78 - -1.16 - - -0.98 4.09 -2.13
AMTR_s00012p00203480 (evm_27.TU.AmTr_v1.0_scaffold00012.137)
- - -3.68 1.3 1.48 - -4.14 -0.01 -5.14 -2.95 -0.63 -1.36 -0.96 -0.96 -0.44 - 0.24 - -1.13 -1.09 3.38 -2.5
AMTR_s00012p00228430 (evm_27.TU.AmTr_v1.0_scaffold00012.180)
- - - 1.85 -0.14 - - 0.82 - -5.14 - - - - -3.86 - -2.58 - - -4.08 3.94 -5.44
AMTR_s00012p00255600 (evm_27.TU.AmTr_v1.0_scaffold00012.290)
- - - 2.58 -2.7 - - - -4.29 -4.86 - - -4.75 -5.12 -1.37 -0.02 -1.59 0.35 1.51 0.65 3.0 -1.86
AMTR_s00015p00229890 (evm_27.TU.AmTr_v1.0_scaffold00015.83)
- - - 2.98 0.68 - -8.07 2.73 -4.8 -4.36 -2.34 - -1.68 -3.49 -1.81 - -2.9 - - -1.29 2.06 -2.37
AMTR_s00020p00137290 (evm_27.TU.AmTr_v1.0_scaffold00020.50)
- - - 1.48 1.28 - - 2.75 - - - - -3.74 -4.32 - - -0.44 - - -2.13 3.16 -
AMTR_s00029p00158900 (evm_27.TU.AmTr_v1.0_scaffold00029.188)
- - - 2.65 -1.49 - - - -3.04 -3.21 - - -1.32 -1.46 0.14 -0.19 1.59 - -0.98 -1.01 3.03 -2.44
AMTR_s00034p00027260 (evm_27.TU.AmTr_v1.0_scaffold00034.2)
0.29 - -3.56 2.46 1.31 - - 3.13 - - - - - -6.66 -6.75 - - - - -5.66 1.98 -
AMTR_s00034p00225550 (evm_27.TU.AmTr_v1.0_scaffold00034.98)
-2.33 - - 2.46 -3.04 - -7.52 -1.27 -7.91 -6.2 -5.47 - -7.54 -4.22 -6.8 -3.29 -3.82 - - -3.65 3.94 -7.73
AMTR_s00034p00229260 (evm_27.TU.AmTr_v1.0_scaffold00034.102)
- 2.21 - 1.31 1.18 - -2.04 - -2.8 -2.54 - - 0.18 0.16 0.19 - -0.55 - - 1.02 2.18 0.5
AMTR_s00037p00079030 (evm_27.TU.AmTr_v1.0_scaffold00037.25)
1.73 - - -0.07 0.02 - - 1.81 - - - - - - - - - - - -2.74 3.71 -
AMTR_s00041p00198360 (evm_27.TU.AmTr_v1.0_scaffold00041.175)
- - - 2.34 -0.36 - - 2.69 - - - -0.43 -3.74 - -5.63 - - - - -2.87 3.13 -
AMTR_s00046p00186330 (evm_27.TU.AmTr_v1.0_scaffold00046.110)
- - - 2.32 -3.38 - -7.97 -7.89 -10.42 -8.19 -4.54 -3.73 -6.18 -5.81 -3.27 -4.3 - - -4.9 -5.47 4.04 -5.57
AMTR_s00049p00086260 (evm_27.TU.AmTr_v1.0_scaffold00049.55)
- 3.19 - 1.56 0.4 - - - -4.24 - - - - -2.33 - - - 0.38 - - 2.81 -
AMTR_s00050p00192550 (evm_27.TU.AmTr_v1.0_scaffold00050.59)
- 0.48 - 1.52 1.19 - -4.26 - -4.87 -2.31 -0.01 - -1.96 -0.57 -0.68 -0.29 -1.7 0.09 - -0.86 3.25 -1.48
AMTR_s00051p00187370 (evm_27.TU.AmTr_v1.0_scaffold00051.75)
- - - 3.34 -1.05 - - 3.16 - -5.45 - - - - - - - - - - 1.3 -
AMTR_s00057p00152200 (evm_27.TU.AmTr_v1.0_scaffold00057.139)
- - -2.16 2.2 1.34 - - 0.88 -3.06 -4.61 -0.62 - 0.72 -1.87 1.37 -0.02 -2.59 0.36 -0.81 0.69 0.2 0.79
AMTR_s00058p00189280 (evm_27.TU.AmTr_v1.0_scaffold00058.188)
- - - 1.33 -0.13 - -6.05 - -3.85 -3.83 0.87 1.13 1.16 -1.4 -0.29 -0.66 0.24 -0.29 0.89 0.37 1.78 0.83
AMTR_s00059p00012580 (evm_27.TU.AmTr_v1.0_scaffold00059.2)
-0.14 - -3.44 0.46 -0.47 - -5.89 - -3.66 -3.38 0.45 0.86 0.05 -1.93 -1.74 0.78 0.65 -0.65 -0.38 0.03 2.95 -1.0
AMTR_s00060p00195440 (evm_27.TU.AmTr_v1.0_scaffold00060.139)
- - -4.14 1.6 0.99 - -3.86 - -2.23 -2.98 0.82 -0.61 0.71 -0.09 -0.87 0.06 1.36 -0.75 0.48 -0.73 2.03 -0.59
AMTR_s00062p00116740 (evm_27.TU.AmTr_v1.0_scaffold00062.98)
- - - -0.02 0.45 2.65 -3.06 1.3 -4.1 -2.13 - - -2.79 -2.63 -3.0 - -2.58 - - -3.57 3.3 -
AMTR_s00062p00132510 (evm_27.TU.AmTr_v1.0_scaffold00062.108)
- - - 1.3 0.79 - - 1.25 -4.54 - - - -5.96 -5.54 -5.05 - - - - - 3.94 -
AMTR_s00062p00132610 (evm_27.TU.AmTr_v1.0_scaffold00062.109)
- - - 2.94 -0.61 - -4.41 2.42 -4.41 - - - - - -5.88 - - - - -4.9 3.03 -
AMTR_s00062p00133230 (evm_27.TU.AmTr_v1.0_scaffold00062.113)
- - - 1.38 1.62 - - 0.71 - - -1.48 - -1.8 - -1.22 - -0.11 - - -3.07 3.63 -2.27
AMTR_s00064p00071370 (evm_27.TU.AmTr_v1.0_scaffold00064.23)
- - - 0.96 0.43 - - 0.85 -0.97 -1.79 - - - - - - - - - - 3.99 -1.93
AMTR_s00067p00096790 (evm_27.TU.AmTr_v1.0_scaffold00067.75)
- - -0.5 2.96 2.13 - -1.7 - - -1.85 - - -0.44 -1.62 -1.31 - - - - - 2.71 -0.99
AMTR_s00069p00128690 (evm_27.TU.AmTr_v1.0_scaffold00069.89)
1.07 - - 2.36 1.67 - - - -2.07 -1.25 - - -0.41 -0.51 0.17 - 1.46 - - -0.3 2.25 -
AMTR_s00071p00011090 (evm_27.TU.AmTr_v1.0_scaffold00071.1)
0.26 0.78 0.74 0.84 1.48 - -8.53 -0.04 -8.7 -8.58 - - -5.16 -5.95 -4.39 - -4.2 - -6.13 -5.74 3.54 -
AMTR_s00073p00177110 (evm_27.TU.AmTr_v1.0_scaffold00073.53)
- 2.39 - -1.57 0.38 - -1.76 - -2.03 -2.19 0.22 -0.08 -1.69 -1.32 -1.07 -0.64 -0.32 1.14 -0.23 -0.32 2.45 -1.68
AMTR_s00075p00147380 (evm_27.TU.AmTr_v1.0_scaffold00075.42)
-0.16 2.15 -4.22 1.9 -1.17 - -4.7 -0.38 -2.48 -3.35 -1.0 -1.55 -0.42 -0.9 -2.27 -0.53 -1.55 -0.74 1.2 0.33 1.6 -0.33
AMTR_s00079p00175520 (evm_27.TU.AmTr_v1.0_scaffold00079.91)
- 1.32 1.55 2.88 0.68 - - 2.81 - - - - -5.88 -5.52 -4.39 - -4.05 - - -5.1 -1.26 -5.93
AMTR_s00087p00068100 (evm_27.TU.AmTr_v1.0_scaffold00087.17)
- - - 1.28 -4.86 - - - -3.18 -5.14 -2.4 0.93 -0.86 -0.07 -2.52 -0.22 - 1.47 -0.92 -1.21 3.45 -3.35
AMTR_s00089p00160720 (evm_27.TU.AmTr_v1.0_scaffold00089.97)
2.01 - - 1.52 - - - - - - -1.54 - -2.03 -2.39 -4.51 - -1.3 - - -1.58 3.66 -0.1
- -7.17 - 2.44 -3.44 - - -1.52 -14.68 -8.92 - -2.98 -10.33 -6.34 -7.15 - - - - -5.3 4.0 -6.48
AMTR_s00101p00112720 (evm_27.TU.AmTr_v1.0_scaffold00101.86)
-2.2 - -1.6 1.25 0.79 1.75 -2.29 0.53 -1.48 -1.98 -0.26 0.46 -0.49 -0.42 -0.6 0.31 -0.02 -0.45 -0.57 -0.56 1.07 -0.01
AMTR_s00102p00105080 (evm_27.TU.AmTr_v1.0_scaffold00102.58)
-2.15 -2.94 -0.92 1.97 -2.04 - -11.24 -3.17 -8.85 -8.65 -5.1 -6.51 -5.57 -5.97 -5.8 -5.08 -4.47 -7.71 -7.68 -5.53 4.06 -6.06
AMTR_s00102p00107760 (evm_27.TU.AmTr_v1.0_scaffold00102.60)
-6.19 -2.4 -5.37 1.41 -1.06 - -9.13 -1.14 -8.57 -8.08 -5.5 -6.46 -5.62 -4.95 -5.46 -3.57 -4.25 -8.24 -6.49 -2.6 4.15 -5.41
AMTR_s00106p00036060 (evm_27.TU.AmTr_v1.0_scaffold00106.14)
- 1.59 - - -1.51 1.76 0.73 1.79 -0.72 -0.23 0.74 -0.04 0.36 -0.39 -1.48 - 0.41 - -2.39 -0.16 -0.38 -1.18
- 0.56 0.39 2.26 1.01 - -5.43 1.09 -5.48 -6.92 - - -4.88 -4.95 -3.2 - -2.7 - - - 3.3 -4.59
AMTR_s00124p00124070 (evm_27.TU.AmTr_v1.0_scaffold00124.29)
- 1.98 - 1.47 1.08 - - -1.36 -3.52 -3.57 -1.81 - -1.45 -1.88 -1.04 -1.5 0.47 - - -1.0 3.11 -1.47
AMTR_s00130p00119060 (evm_27.TU.AmTr_v1.0_scaffold00130.65)
-1.63 -6.74 0.97 1.83 -2.03 - -8.52 1.45 -7.62 -6.71 - - -7.19 -5.63 -4.53 - -5.95 - - -4.98 3.7 -4.74
AMTR_s00130p00119720 (evm_27.TU.AmTr_v1.0_scaffold00130.70)
- - 0.5 1.8 -0.23 1.95 -6.39 2.34 - - -2.73 - -4.68 - -3.36 - -1.98 - -3.13 -4.38 2.73 -
AMTR_s00154p00028930 (evm_27.TU.AmTr_v1.0_scaffold00154.10)
- - - 1.35 - - -5.05 -0.53 - - 1.64 1.63 -0.08 -1.56 -2.03 - 0.13 -0.56 -0.01 -0.15 2.74 -0.73
AMTR_s00163p00073600 (evm_27.TU.AmTr_v1.0_scaffold00163.29)
- - - 2.32 -2.01 - - - -3.85 - - - -1.06 - -3.36 - -1.33 0.62 - -1.73 3.78 -3.02
AMTR_s00165p00071420 (evm_27.TU.AmTr_v1.0_scaffold00165.48)
- - - 1.96 -0.46 - 0.42 - 0.35 0.19 0.06 - -1.86 -1.05 -0.18 - 0.16 0.63 0.24 -0.27 2.47 -0.49
AMTR_s00170p00014770 (evm_27.TU.AmTr_v1.0_scaffold00170.2)
- - - 2.01 0.37 - - - - -2.21 - 2.63 -1.51 - -2.82 - - - - - 3.29 -
AMTR_s00235p00023410 (evm_27.TU.AmTr_v1.0_scaffold00235.10)
1.45 - - 1.74 -0.97 - - 1.01 - - - - -5.84 - -3.34 - - - - - 3.73 -4.81
AMTR_s00510p00009950 (evm_27.TU.AmTr_v1.0_scaffold00510.1)
- - - 2.54 3.06 - - 2.97 - - - - - - - - - - - - - -
AMTR_s00514p00011230 (evm_27.TU.AmTr_v1.0_scaffold00514.1)
- - - 0.78 -0.2 - - 0.6 - - - - -4.88 - -5.3 - -0.7 - - -4.13 4.1 -
AMTR_s00543p00008950 (evm_27.TU.AmTr_v1.0_scaffold00543.2)
-1.99 -1.8 -0.65 2.18 -1.17 -4.16 -5.65 -1.02 -5.34 -4.89 -3.01 -4.23 -3.51 -3.78 -4.39 -3.27 -3.29 -4.21 -4.14 -4.19 3.85 -4.52
AMTR_s02071p00004290 (evm_27.TU.AmTr_v1.0_scaffold02071.2)
0.07 -0.49 0.58 0.57 0.38 -1.62 -9.68 -1.09 -9.99 -9.22 -6.12 -8.4 -5.4 -5.74 -5.01 -6.38 -5.62 -6.42 -7.84 -4.71 3.9 -6.2
- - -1.67 2.14 -1.68 - -8.34 0.72 -6.6 -7.17 - - -6.21 -8.7 -4.92 - - - - -5.03 3.93 -5.89
AMTR_s02809p00000680 (evm_27.TU.AmTr_v1.0_scaffold02809.1)
0.49 0.38 0.71 1.79 0.96 -5.8 -12.38 -1.22 -10.99 -11.08 -8.71 -7.2 -8.54 -7.03 -5.2 -7.45 -6.35 - -8.42 -5.89 3.55 -8.3
AMTR_s02820p00004410 (evm_27.TU.AmTr_v1.0_scaffold02820.1)
0.71 1.32 0.8 1.44 -0.29 -0.05 -2.69 1.42 -2.9 -2.85 0.4 0.45 -0.71 -1.07 -2.62 -0.12 -0.03 -0.84 -1.45 -2.15 -0.84 -0.01
AMTR_s03462p00006670 (evm_27.TU.AmTr_v1.0_scaffold03462.1)
1.08 - - - 1.16 2.06 -0.71 0.95 -0.29 -1.69 0.05 0.0 -0.41 -1.58 -0.59 - -3.14 0.64 0.78 0.46 -0.16 -1.43
-1.33 -1.01 -2.11 1.54 -0.7 -2.75 -7.73 -1.52 -7.48 -6.67 -4.72 -5.69 -3.15 -3.82 -4.05 -2.29 -2.37 -4.66 -5.34 -3.54 3.99 -3.75
AMTR_s04495p00005620 (evm_27.TU.AmTr_v1.0_scaffold04495.3)
-5.03 -6.76 - 2.52 -2.82 -3.1 -11.17 1.0 -9.72 -8.63 - -6.48 -8.13 -8.83 -6.14 -7.05 -8.62 - - -6.48 3.8 -
AMTR_s04518p00003640 (evm_27.TU.AmTr_v1.0_scaffold04518.1)
- - - 3.64 0.58 - - 2.28 - - -1.84 - - -3.73 -3.18 - -1.51 - - -1.72 0.96 -2.96
AMTR_s04785p00004800 (evm_27.TU.AmTr_v1.0_scaffold04785.2)
- - - 0.62 0.98 - - 0.68 - - -1.41 - - -4.45 -2.28 - - - - - 4.02 -
AMTR_s04785p00007030 (evm_27.TU.AmTr_v1.0_scaffold04785.3)
- - - 1.03 0.06 - - 0.43 -5.14 - - - - - - - - - - - 4.13 -
- - - 2.91 1.25 - -3.61 - -0.63 -3.31 -0.74 - -2.34 -2.67 -4.1 - - 1.6 1.41 - 2.2 -
AMTR_s05276p00003370 (evm_27.TU.AmTr_v1.0_scaffold05276.1)
- - - -2.55 -2.3 - - 2.01 - -4.39 - - - - - - - - - - 4.13 -
AMTR_s05552p00002570 (evm_27.TU.AmTr_v1.0_scaffold05552.1)
- -3.97 1.19 2.9 2.26 - - 2.0 -6.81 -6.72 - - - - -4.8 - -4.15 - - - 1.72 -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.