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Heatmap: Cluster_199 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00001p00260380 (evm_27.TU.AmTr_v1.0_scaffold00001.371)
 0.0 0.09 0.0 11.46 4.52 0.0 0.01 11.82 0.11 0.12 0.37 1.31 0.12 0.12 0.58 0.0 0.07 0.57 0.57 0.14 10.81 0.05
0.0 0.0 0.0 1.03 0.13 0.0 0.0 0.0 0.0 0.0 0.08 0.0 0.02 0.0 0.12 0.0 0.0 0.0 0.0 0.0 1.33 0.0
AMTR_s00002p00143250 (evm_27.TU.AmTr_v1.0_scaffold00002.105)
 7.85 0.26 0.0 9.03 3.7 0.0 0.06 0.0 0.65 0.53 1.98 3.35 4.41 3.7 2.52 4.53 1.52 0.0 8.58 6.74 21.06 4.56
AMTR_s00009p00195580 (evm_27.TU.AmTr_v1.0_scaffold00009.125)
 39.97 5.11 7.62 91.55 4.79 44.34 0.53 85.17 1.13 0.78 3.91 3.05 10.37 1.59 4.34 4.5 0.2 5.58 2.61 1.54 1.74 1.95
AMTR_s00010p00050670 (evm_27.TU.AmTr_v1.0_scaffold00010.24)
 0.0 0.0 0.0 1.55 0.09 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.18 0.0 0.15 0.0 0.24 0.0 0.0 0.27 8.97 0.12
AMTR_s00012p00203480 (evm_27.TU.AmTr_v1.0_scaffold00012.137)
 0.0 0.0 0.18 5.83 6.62 0.0 0.13 2.36 0.07 0.31 1.53 0.92 1.22 1.22 1.75 0.0 2.8 0.0 1.08 1.11 24.63 0.42
AMTR_s00012p00228430 (evm_27.TU.AmTr_v1.0_scaffold00012.180)
 0.0 0.0 0.0 7.77 1.96 0.0 0.0 3.82 0.0 0.06 0.0 0.0 0.0 0.0 0.15 0.0 0.36 0.0 0.0 0.13 33.19 0.05
AMTR_s00012p00255600 (evm_27.TU.AmTr_v1.0_scaffold00012.290)
 0.0 0.0 0.0 12.08 0.31 0.0 0.0 0.0 0.1 0.07 0.0 0.0 0.07 0.06 0.78 1.99 0.67 2.57 5.75 3.15 16.16 0.55
AMTR_s00015p00229890 (evm_27.TU.AmTr_v1.0_scaffold00015.83)
 0.0 0.0 0.0 92.75 18.85 0.0 0.04 78.07 0.42 0.57 2.32 0.0 3.66 1.04 3.35 0.0 1.58 0.0 0.0 4.8 49.08 2.28
AMTR_s00020p00137290 (evm_27.TU.AmTr_v1.0_scaffold00020.50)
 0.0 0.0 0.0 1.06 0.92 0.0 0.0 2.56 0.0 0.0 0.0 0.0 0.03 0.02 0.0 0.0 0.28 0.0 0.0 0.09 3.4 0.0
AMTR_s00029p00158900 (evm_27.TU.AmTr_v1.0_scaffold00029.188)
 0.0 0.0 0.0 2.53 0.14 0.0 0.0 0.0 0.05 0.04 0.0 0.0 0.16 0.15 0.44 0.35 1.22 0.0 0.2 0.2 3.29 0.07
AMTR_s00034p00027260 (evm_27.TU.AmTr_v1.0_scaffold00034.2)
 6.12 0.0 0.43 27.56 12.4 0.0 0.0 43.79 0.0 0.0 0.0 0.0 0.0 0.05 0.05 0.0 0.0 0.0 0.0 0.1 19.7 0.0
AMTR_s00034p00225550 (evm_27.TU.AmTr_v1.0_scaffold00034.98)
 3.03 0.0 0.0 84.34 1.86 0.0 0.08 6.32 0.06 0.21 0.35 0.0 0.08 0.82 0.14 1.56 1.08 0.0 0.0 1.21 234.97 0.07
AMTR_s00034p00229260 (evm_27.TU.AmTr_v1.0_scaffold00034.102)
 0.0 0.73 0.0 0.39 0.36 0.0 0.04 0.0 0.02 0.03 0.0 0.0 0.18 0.18 0.18 0.0 0.11 0.0 0.0 0.32 0.71 0.22
AMTR_s00037p00079030 (evm_27.TU.AmTr_v1.0_scaffold00037.25)
 2.06 0.0 0.0 0.59 0.63 0.0 0.0 2.18 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.09 8.14 0.0
AMTR_s00041p00198360 (evm_27.TU.AmTr_v1.0_scaffold00041.175)
 0.0 0.0 0.0 5.66 0.87 0.0 0.0 7.22 0.0 0.0 0.0 0.83 0.08 0.0 0.02 0.0 0.0 0.0 0.0 0.15 9.77 0.0
AMTR_s00046p00186330 (evm_27.TU.AmTr_v1.0_scaffold00046.110)
 0.0 0.0 0.0 365.55 7.02 0.0 0.29 0.31 0.05 0.25 3.14 5.5 1.01 1.3 7.57 3.72 0.0 0.0 2.44 1.65 1205.34 1.53
AMTR_s00049p00086260 (evm_27.TU.AmTr_v1.0_scaffold00049.55)
 0.0 6.9 0.0 2.22 1.0 0.0 0.0 0.0 0.04 0.0 0.0 0.0 0.0 0.15 0.0 0.0 0.0 0.98 0.0 0.0 5.29 0.0
AMTR_s00050p00192550 (evm_27.TU.AmTr_v1.0_scaffold00050.59)
 0.0 0.42 0.0 0.87 0.69 0.0 0.02 0.0 0.01 0.06 0.3 0.0 0.08 0.2 0.19 0.25 0.09 0.32 0.0 0.17 2.9 0.11
AMTR_s00051p00187370 (evm_27.TU.AmTr_v1.0_scaffold00051.75)
 0.0 0.0 0.0 29.99 1.43 0.0 0.0 26.39 0.0 0.07 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 7.28 0.0
AMTR_s00057p00152200 (evm_27.TU.AmTr_v1.0_scaffold00057.139)
 0.0 0.0 0.45 9.36 5.14 0.0 0.0 3.74 0.24 0.08 1.32 0.0 3.36 0.56 5.26 2.01 0.34 2.61 1.16 3.29 2.34 3.53
AMTR_s00058p00189280 (evm_27.TU.AmTr_v1.0_scaffold00058.188)
 0.0 0.0 0.0 1.62 0.59 0.0 0.01 0.0 0.04 0.05 1.18 1.41 1.44 0.24 0.53 0.41 0.76 0.53 1.2 0.83 2.21 1.15
AMTR_s00059p00012580 (evm_27.TU.AmTr_v1.0_scaffold00059.2)
 1.19 0.0 0.12 1.8 0.95 0.0 0.02 0.0 0.1 0.13 1.79 2.38 1.35 0.34 0.39 2.25 2.05 0.83 1.01 1.33 10.08 0.65
AMTR_s00060p00195440 (evm_27.TU.AmTr_v1.0_scaffold00060.139)
 0.0 0.0 0.1 5.5 3.6 0.0 0.12 0.0 0.39 0.23 3.21 1.19 2.98 1.71 0.99 1.9 4.67 1.08 2.52 1.09 7.42 1.21
AMTR_s00062p00116740 (evm_27.TU.AmTr_v1.0_scaffold00062.98)
 0.0 0.0 0.0 0.76 1.05 4.83 0.09 1.89 0.05 0.18 0.0 0.0 0.11 0.12 0.1 0.0 0.13 0.0 0.0 0.06 7.57 0.0
AMTR_s00062p00132510 (evm_27.TU.AmTr_v1.0_scaffold00062.108)
 0.0 0.0 0.0 7.13 4.98 0.0 0.0 6.86 0.12 0.0 0.0 0.0 0.05 0.06 0.09 0.0 0.0 0.0 0.0 0.0 44.21 0.0
AMTR_s00062p00132610 (evm_27.TU.AmTr_v1.0_scaffold00062.109)
 0.0 0.0 0.0 27.94 2.39 0.0 0.17 19.58 0.17 0.0 0.0 0.0 0.0 0.0 0.06 0.0 0.0 0.0 0.0 0.12 29.85 0.0
AMTR_s00062p00133230 (evm_27.TU.AmTr_v1.0_scaffold00062.113)
 0.0 0.0 0.0 0.72 0.85 0.0 0.0 0.45 0.0 0.0 0.1 0.0 0.08 0.0 0.12 0.0 0.26 0.0 0.0 0.03 3.42 0.06
AMTR_s00064p00071370 (evm_27.TU.AmTr_v1.0_scaffold00064.23)
 0.0 0.0 0.0 0.49 0.34 0.0 0.0 0.45 0.13 0.07 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 3.98 0.07
AMTR_s00067p00096790 (evm_27.TU.AmTr_v1.0_scaffold00067.75)
 0.0 0.0 0.11 1.18 0.66 0.0 0.05 0.0 0.0 0.04 0.0 0.0 0.11 0.05 0.06 0.0 0.0 0.0 0.0 0.0 0.99 0.08
AMTR_s00069p00128690 (evm_27.TU.AmTr_v1.0_scaffold00069.89)
 0.27 0.0 0.0 0.66 0.41 0.0 0.0 0.0 0.03 0.05 0.0 0.0 0.1 0.09 0.15 0.0 0.36 0.0 0.0 0.1 0.61 0.0
AMTR_s00071p00011090 (evm_27.TU.AmTr_v1.0_scaffold00071.1)
 22.67 32.43 31.58 33.89 52.84 0.0 0.05 18.38 0.05 0.05 0.0 0.0 0.53 0.31 0.9 0.0 1.03 0.0 0.27 0.35 220.75 0.0
AMTR_s00073p00177110 (evm_27.TU.AmTr_v1.0_scaffold00073.53)
 0.0 4.78 0.0 0.31 1.19 0.0 0.27 0.0 0.22 0.2 1.07 0.87 0.28 0.37 0.44 0.58 0.73 2.02 0.78 0.73 4.98 0.28
AMTR_s00075p00147380 (evm_27.TU.AmTr_v1.0_scaffold00075.42)
 20.5 101.41 1.22 85.31 10.15 0.0 0.88 17.56 4.1 2.24 11.43 7.8 17.13 12.21 4.75 15.82 7.83 13.65 52.59 28.7 69.43 18.24
AMTR_s00079p00175520 (evm_27.TU.AmTr_v1.0_scaffold00079.91)
 0.0 9.33 10.9 27.36 5.98 0.0 0.0 26.14 0.0 0.0 0.0 0.0 0.06 0.08 0.18 0.0 0.22 0.0 0.0 0.11 1.55 0.06
AMTR_s00087p00068100 (evm_27.TU.AmTr_v1.0_scaffold00087.17)
 0.0 0.0 0.0 1.15 0.02 0.0 0.0 0.0 0.05 0.01 0.09 0.9 0.26 0.45 0.08 0.4 0.0 1.31 0.25 0.2 5.17 0.05
AMTR_s00089p00160720 (evm_27.TU.AmTr_v1.0_scaffold00089.97)
 1.36 0.0 0.0 0.97 0.0 0.0 0.0 0.0 0.0 0.0 0.12 0.0 0.08 0.06 0.01 0.0 0.14 0.0 0.0 0.11 4.27 0.32
0.0 0.05 0.0 36.16 0.62 0.0 0.0 2.32 0.0 0.01 0.0 0.84 0.01 0.08 0.05 0.0 0.0 0.0 0.0 0.17 106.34 0.07
AMTR_s00101p00112720 (evm_27.TU.AmTr_v1.0_scaffold00101.86)
 1.11 0.0 1.69 12.17 8.84 17.2 1.05 7.37 1.84 1.3 4.28 7.02 3.66 3.81 3.37 6.33 5.06 3.75 3.45 3.47 10.72 5.09
AMTR_s00102p00105080 (evm_27.TU.AmTr_v1.0_scaffold00102.58)
 14.42 8.32 33.89 250.11 15.53 0.0 0.03 7.12 0.14 0.16 1.87 0.7 1.34 1.02 1.15 1.89 2.89 0.31 0.31 1.39 1064.36 0.96
AMTR_s00102p00107760 (evm_27.TU.AmTr_v1.0_scaffold00102.60)
 1.07 14.83 1.89 207.36 37.38 0.0 0.14 35.43 0.21 0.29 1.73 0.88 1.59 2.53 1.78 6.58 4.12 0.26 0.87 12.85 1383.81 1.83
AMTR_s00106p00036060 (evm_27.TU.AmTr_v1.0_scaffold00106.14)
 0.0 1.72 0.0 0.0 0.2 1.95 0.95 1.98 0.35 0.49 0.95 0.56 0.74 0.44 0.21 0.0 0.76 0.0 0.11 0.51 0.44 0.25
0.0 10.08 8.96 32.86 13.83 0.0 0.16 14.56 0.15 0.06 0.0 0.0 0.23 0.22 0.75 0.0 1.06 0.0 0.0 0.0 67.4 0.28
AMTR_s00124p00124070 (evm_27.TU.AmTr_v1.0_scaffold00124.29)
 0.0 5.28 0.0 3.72 2.84 0.0 0.0 0.52 0.12 0.11 0.38 0.0 0.49 0.37 0.65 0.47 1.86 0.0 0.0 0.67 11.58 0.48
AMTR_s00130p00119060 (evm_27.TU.AmTr_v1.0_scaffold00130.65)
 1.43 0.04 8.64 15.75 1.08 0.0 0.01 12.04 0.02 0.04 0.0 0.0 0.03 0.09 0.19 0.0 0.07 0.0 0.0 0.14 57.45 0.17
AMTR_s00130p00119720 (evm_27.TU.AmTr_v1.0_scaffold00130.70)
 0.0 0.0 2.53 6.22 1.52 6.9 0.02 9.05 0.0 0.0 0.27 0.0 0.07 0.0 0.17 0.0 0.45 0.0 0.2 0.09 11.91 0.0
AMTR_s00154p00028930 (evm_27.TU.AmTr_v1.0_scaffold00154.10)
 0.0 0.0 0.0 0.65 0.0 0.0 0.01 0.18 0.0 0.0 0.79 0.79 0.24 0.09 0.06 0.0 0.28 0.17 0.25 0.23 1.7 0.15
AMTR_s00163p00073600 (evm_27.TU.AmTr_v1.0_scaffold00163.29)
 0.0 0.0 0.0 2.18 0.11 0.0 0.0 0.0 0.03 0.0 0.0 0.0 0.21 0.0 0.04 0.0 0.17 0.67 0.0 0.13 6.03 0.05
AMTR_s00165p00071420 (evm_27.TU.AmTr_v1.0_scaffold00165.48)
 0.0 0.0 0.0 11.46 2.14 0.0 3.94 0.0 3.74 3.37 3.07 0.0 0.81 1.42 2.6 0.0 3.29 4.55 3.47 2.44 16.34 2.09
AMTR_s00170p00014770 (evm_27.TU.AmTr_v1.0_scaffold00170.2)
 0.0 0.0 0.0 0.9 0.29 0.0 0.0 0.0 0.0 0.05 0.0 1.39 0.08 0.0 0.03 0.0 0.0 0.0 0.0 0.0 2.18 0.0
AMTR_s00235p00023410 (evm_27.TU.AmTr_v1.0_scaffold00235.10)
 6.29 0.0 0.0 7.66 1.18 0.0 0.0 4.62 0.0 0.0 0.0 0.0 0.04 0.0 0.23 0.0 0.0 0.0 0.0 0.0 30.48 0.08
AMTR_s00510p00009950 (evm_27.TU.AmTr_v1.0_scaffold00510.1)
 0.0 0.0 0.0 0.19 0.27 0.0 0.0 0.26 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00514p00011230 (evm_27.TU.AmTr_v1.0_scaffold00514.1)
 0.0 0.0 0.0 3.61 1.83 0.0 0.0 3.19 0.0 0.0 0.0 0.0 0.07 0.0 0.05 0.0 1.3 0.0 0.0 0.12 36.19 0.0
AMTR_s00543p00008950 (evm_27.TU.AmTr_v1.0_scaffold00543.2)
 4.88 5.54 12.28 87.45 8.59 1.08 0.39 9.54 0.48 0.65 2.4 1.03 1.69 1.41 0.92 2.0 1.98 1.05 1.09 1.06 278.96 0.84
AMTR_s02071p00004290 (evm_27.TU.AmTr_v1.0_scaffold02071.2)
 389.99 264.7 555.18 550.37 482.75 121.26 0.45 174.83 0.36 0.62 5.36 1.1 8.79 6.94 11.54 4.48 7.57 4.35 1.63 14.25 5568.7 5.06
0.0 0.0 6.29 88.05 6.24 0.0 0.06 32.97 0.21 0.14 0.0 0.0 0.27 0.05 0.66 0.0 0.0 0.0 0.0 0.61 304.73 0.34
AMTR_s02809p00000680 (evm_27.TU.AmTr_v1.0_scaffold02809.1)
 634.9 589.87 741.85 1564.55 880.94 8.1 0.08 194.77 0.22 0.21 1.08 3.07 1.21 3.46 12.32 2.59 5.55 0.0 1.32 7.62 5302.24 1.44
AMTR_s02820p00004410 (evm_27.TU.AmTr_v1.0_scaffold02820.1)
 23.87 36.55 25.43 39.69 12.0 14.1 2.27 39.14 1.97 2.03 19.34 19.95 8.98 6.97 2.37 13.48 14.33 8.2 5.37 3.29 8.16 14.54
AMTR_s03462p00006670 (evm_27.TU.AmTr_v1.0_scaffold03462.1)
 1.6 0.0 0.0 0.0 1.7 3.16 0.46 1.47 0.62 0.23 0.78 0.76 0.57 0.25 0.5 0.0 0.09 1.18 1.3 1.04 0.68 0.28
10.81 13.43 6.26 78.69 16.71 4.02 0.13 9.45 0.15 0.27 1.03 0.52 3.05 1.92 1.63 5.55 5.26 1.07 0.67 2.33 431.13 2.01
AMTR_s04495p00005620 (evm_27.TU.AmTr_v1.0_scaffold04495.3)
 0.56 0.17 0.0 104.17 2.58 2.12 0.01 36.33 0.02 0.05 0.0 0.2 0.07 0.04 0.26 0.14 0.05 0.0 0.0 0.2 252.9 0.0
AMTR_s04518p00003640 (evm_27.TU.AmTr_v1.0_scaffold04518.1)
 0.0 0.0 0.0 17.95 2.15 0.0 0.0 6.99 0.0 0.0 0.4 0.0 0.0 0.11 0.16 0.0 0.51 0.0 0.0 0.44 2.81 0.19
AMTR_s04785p00004800 (evm_27.TU.AmTr_v1.0_scaffold04785.2)
 0.0 0.0 0.0 0.97 1.23 0.0 0.0 1.01 0.0 0.0 0.24 0.0 0.0 0.03 0.13 0.0 0.0 0.0 0.0 0.0 10.22 0.0
AMTR_s04785p00007030 (evm_27.TU.AmTr_v1.0_scaffold04785.3)
 0.0 0.0 0.0 5.66 2.9 0.0 0.0 3.74 0.08 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 48.76 0.0
0.0 0.0 0.0 1.04 0.33 0.0 0.01 0.0 0.09 0.01 0.08 0.0 0.03 0.02 0.01 0.0 0.0 0.42 0.37 0.0 0.64 0.0
AMTR_s05276p00003370 (evm_27.TU.AmTr_v1.0_scaffold05276.1)
 0.0 0.0 0.0 0.27 0.32 0.0 0.0 6.37 0.0 0.08 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 27.69 0.0
AMTR_s05552p00002570 (evm_27.TU.AmTr_v1.0_scaffold05552.1)
 0.0 0.28 10.0 32.68 20.95 0.0 0.0 17.52 0.04 0.04 0.0 0.0 0.0 0.0 0.16 0.0 0.25 0.0 0.0 0.0 14.48 0.0

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)