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Heatmap: Cluster_226 (HCCA)

View as: (view raw or zlog-transformed)

View using InCHLib : here ( Experimental feature, still under development)

(Values are normalized against highest expression of the row)

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Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00002p00250220 (evm_27.TU.AmTr_v1.0_scaffold00002.352)
 0.74 0.39 1.0 0.29 0.43 0.31 0.25 0.0 0.2 0.19 0.47 0.63 0.87 0.56 0.78 0.35 0.31 0.35 0.61 0.71 0.15 0.57
AMTR_s00002p00256190 (evm_27.TU.AmTr_v1.0_scaffold00002.403)
 0.09 0.2 0.16 0.0 0.27 0.0 0.0 0.0 0.0 0.0 0.32 0.56 0.34 1.0 0.53 0.19 0.21 0.12 0.0 0.31 0.0 0.01
AMTR_s00005p00265410 (evm_27.TU.AmTr_v1.0_scaffold00005.224)
 0.0 0.0 0.0 0.08 0.3 0.0 0.08 0.0 0.07 0.06 0.58 0.22 1.0 0.43 0.38 0.0 0.24 0.2 0.27 0.47 0.41 0.53
AMTR_s00006p00254090 (evm_27.TU.AmTr_v1.0_scaffold00006.175)
 0.2 0.33 0.14 0.31 0.22 0.26 0.08 0.03 0.14 0.11 0.77 0.95 0.66 0.56 1.0 0.48 0.78 0.61 0.64 0.84 0.11 0.52
AMTR_s00007p00189640 (evm_27.TU.AmTr_v1.0_scaffold00007.159)
 0.56 0.26 0.57 0.23 0.63 0.0 0.1 0.04 0.14 0.15 0.61 0.76 1.0 0.75 0.79 0.44 0.8 0.49 0.64 0.75 0.42 0.83
AMTR_s00008p00014220 (evm_27.TU.AmTr_v1.0_scaffold00008.3)
 0.0 0.0 0.0 0.0 0.06 0.0 0.0 0.0 0.0 0.0 0.5 0.85 0.27 0.46 0.05 0.0 0.0 0.74 0.0 0.11 1.0 0.22
AMTR_s00010p00180790 (evm_27.TU.AmTr_v1.0_scaffold00010.152)
 0.31 0.5 0.2 0.45 0.38 0.6 0.13 0.24 0.08 0.09 0.55 0.32 1.0 0.72 0.56 0.32 0.52 0.63 0.37 0.59 0.32 0.67
AMTR_s00012p00124660 (evm_27.TU.AmTr_v1.0_scaffold00012.65)
 0.34 0.23 0.39 0.64 0.4 0.12 0.17 0.16 0.17 0.17 0.51 0.61 0.72 0.84 1.0 0.34 0.17 0.56 0.74 0.69 0.26 0.46
AMTR_s00017p00244900 (evm_27.TU.AmTr_v1.0_scaffold00017.226)
 0.01 0.03 0.01 0.0 0.4 0.02 0.0 0.0 0.0 0.0 0.53 0.79 0.23 1.0 0.68 0.01 0.06 0.02 0.03 0.03 0.02 0.03
AMTR_s00019p00193890 (evm_27.TU.AmTr_v1.0_scaffold00019.218)
 0.0 0.01 0.13 0.01 0.07 0.0 0.71 0.06 0.75 0.84 0.7 0.73 0.71 0.48 0.49 0.19 1.0 0.75 0.43 0.4 0.2 0.47
AMTR_s00022p00188990 (evm_27.TU.AmTr_v1.0_scaffold00022.205)
 0.0 0.0 0.0 0.01 0.19 0.0 0.04 0.0 0.03 0.03 0.49 1.0 0.4 0.39 0.51 0.29 0.53 0.19 0.22 0.22 0.07 0.56
AMTR_s00024p00248910 (evm_27.TU.AmTr_v1.0_scaffold00024.323)
 0.42 0.06 0.13 0.3 0.1 0.35 0.34 0.36 0.43 0.36 0.78 0.58 1.0 0.22 0.2 0.15 0.61 0.45 0.36 0.4 0.18 0.59
AMTR_s00028p00174370 (evm_27.TU.AmTr_v1.0_scaffold00028.68)
 0.77 0.12 0.26 0.1 0.13 0.0 0.07 0.0 0.05 0.03 0.46 0.48 0.62 1.0 0.6 0.11 0.39 0.3 0.03 0.29 0.0 0.27
AMTR_s00038p00156510 (evm_27.TU.AmTr_v1.0_scaffold00038.95)
 0.6 0.27 0.0 0.28 0.1 0.0 0.03 0.03 0.04 0.04 0.75 1.0 0.88 0.78 0.81 0.51 0.25 0.48 0.61 0.71 0.29 0.59
AMTR_s00038p00214680 (evm_27.TU.AmTr_v1.0_scaffold00038.177)
 0.0 0.0 0.0 0.0 0.0 0.0 0.01 0.0 0.0 0.0 0.18 0.12 0.61 1.0 0.06 0.0 0.0 0.04 0.0 0.0 0.03 0.0
AMTR_s00039p00208080 (evm_27.TU.AmTr_v1.0_scaffold00039.175)
 0.02 0.01 0.17 0.28 0.38 0.01 0.38 0.12 0.43 0.36 0.74 0.86 1.0 0.75 0.82 0.76 0.66 0.66 0.71 0.75 0.51 0.73
AMTR_s00050p00129660 (evm_27.TU.AmTr_v1.0_scaffold00050.28)
 0.34 0.28 0.19 0.22 0.05 0.0 0.01 0.0 0.01 0.01 0.88 0.89 0.76 0.51 0.46 0.38 0.46 0.72 0.69 1.0 0.38 0.74
AMTR_s00052p00041770 (evm_27.TU.AmTr_v1.0_scaffold00052.3)
 0.0 0.0 0.0 0.0 0.09 0.0 0.02 0.0 0.01 0.01 0.54 1.0 0.93 0.92 0.42 0.09 0.25 0.04 0.17 0.3 0.14 0.51
AMTR_s00053p00124300 (evm_27.TU.AmTr_v1.0_scaffold00053.71)
 0.87 0.36 0.28 0.35 0.2 0.1 0.01 0.02 0.0 0.01 0.55 0.76 0.82 0.63 1.0 0.24 0.24 0.29 0.4 0.84 0.23 0.76
AMTR_s00066p00154930 (evm_27.TU.AmTr_v1.0_scaffold00066.158)
 0.02 0.0 0.05 0.1 0.2 0.0 0.08 0.08 0.17 0.14 0.7 0.87 1.0 0.69 0.6 0.32 0.57 0.63 0.72 0.96 0.35 0.6
AMTR_s00068p00120060 (evm_27.TU.AmTr_v1.0_scaffold00068.76)
 0.02 0.0 0.0 0.02 0.17 0.0 0.01 0.0 0.03 0.02 0.44 1.0 0.5 0.56 0.21 0.19 0.27 0.38 0.31 0.12 0.39 0.51
AMTR_s00069p00033900 (evm_27.TU.AmTr_v1.0_scaffold00069.16)
 0.03 0.09 0.13 0.45 0.12 0.0 0.0 0.0 0.0 0.0 0.88 0.94 0.69 0.7 0.95 0.37 1.0 0.33 0.35 0.26 0.16 0.45
AMTR_s00073p00116690 (evm_27.TU.AmTr_v1.0_scaffold00073.29)
 0.22 0.0 0.42 0.47 0.15 0.01 0.65 0.13 0.65 0.63 0.74 0.79 1.0 0.79 0.63 0.25 0.87 0.31 0.29 0.51 0.11 0.55
AMTR_s00074p00149560 (evm_27.TU.AmTr_v1.0_scaffold00074.59)
 0.01 0.1 0.06 0.19 0.0 0.0 0.0 0.0 0.0 0.0 0.85 0.92 1.0 0.77 0.28 0.28 0.24 0.62 0.62 0.87 0.5 0.42
AMTR_s00081p00016210 (evm_27.TU.AmTr_v1.0_scaffold00081.2)
 0.33 0.12 0.01 0.1 0.07 0.0 0.02 0.0 0.05 0.06 0.63 1.0 0.75 0.84 0.84 0.6 0.44 0.53 0.47 0.61 0.06 0.53
AMTR_s00087p00092200 (evm_27.TU.AmTr_v1.0_scaffold00087.29)
 1.0 0.0 0.15 0.01 0.16 0.0 0.15 0.02 0.37 0.36 0.66 0.85 0.81 0.59 0.48 0.25 0.84 0.41 0.5 0.4 0.15 0.68
AMTR_s00088p00169530 (evm_27.TU.AmTr_v1.0_scaffold00088.144)
 0.0 0.7 0.17 0.32 0.33 0.0 0.11 0.0 0.16 0.23 0.56 0.68 1.0 0.45 0.7 0.27 0.3 0.55 0.6 0.9 0.6 0.75
AMTR_s00101p00068840 (evm_27.TU.AmTr_v1.0_scaffold00101.42)
 0.7 0.4 0.41 0.05 0.11 0.02 0.49 0.1 0.58 0.57 0.86 0.77 1.0 0.58 0.17 0.34 0.86 0.66 0.57 0.33 0.35 0.78
AMTR_s00106p00138340 (evm_27.TU.AmTr_v1.0_scaffold00106.108)
 0.24 0.2 0.15 0.26 0.31 0.0 0.01 0.0 0.02 0.03 0.55 1.0 0.87 0.39 0.35 0.41 0.62 0.53 0.55 0.27 0.5 0.87
AMTR_s00119p00120380 (evm_27.TU.AmTr_v1.0_scaffold00119.92)
 0.18 0.08 0.23 0.1 0.15 0.0 0.0 0.0 0.0 0.0 0.49 0.33 1.0 0.28 0.5 0.12 0.59 0.34 0.34 0.27 0.21 0.0
AMTR_s00120p00125950 (evm_27.TU.AmTr_v1.0_scaffold00120.60)
 0.0 1.0 0.3 0.01 0.3 0.0 0.01 0.0 0.04 0.03 0.3 0.53 0.56 0.42 0.78 0.22 0.18 0.24 0.3 0.75 0.1 0.62
AMTR_s00129p00044320 (evm_27.TU.AmTr_v1.0_scaffold00129.20)
 0.21 0.22 0.11 0.14 0.34 0.0 0.0 0.0 0.0 0.0 0.56 1.0 0.65 0.3 0.4 0.8 0.93 0.32 0.14 0.1 0.0 0.63
AMTR_s00153p00057910 (evm_27.TU.AmTr_v1.0_scaffold00153.25)
 0.3 0.0 0.0 0.11 0.12 0.01 0.0 0.0 0.0 0.0 0.77 0.75 0.95 0.28 0.98 0.64 0.49 0.06 0.51 1.0 0.05 0.85
AMTR_s00182p00012370 (evm_27.TU.AmTr_v1.0_scaffold00182.1)
 0.0 0.0 0.0 0.0 0.05 0.0 0.16 0.0 0.07 0.12 0.72 0.0 1.0 0.59 0.35 0.0 0.68 0.0 0.63 0.41 0.0 0.23
AMTR_s00185p00053620 (evm_27.TU.AmTr_v1.0_scaffold00185.21)
 0.67 0.43 0.94 0.1 0.36 0.39 0.41 0.33 0.4 0.39 0.71 0.7 1.0 0.82 0.88 0.37 0.35 0.59 0.53 0.92 0.4 0.81
AMTR_s00185p00053640 (evm_27.TU.AmTr_v1.0_scaffold00185.22)
 0.77 0.5 0.63 0.0 0.3 0.29 0.34 0.1 0.36 0.3 0.49 0.66 0.8 0.71 0.76 0.37 0.36 0.43 0.48 1.0 0.36 0.75
AMTR_s00210p00014650 (evm_27.TU.AmTr_v1.0_scaffold00210.2)
 0.0 0.0 0.0 0.0 0.35 0.0 0.0 0.0 0.03 0.12 0.58 1.0 0.99 0.21 0.36 0.0 0.0 0.88 0.22 0.83 0.39 0.4
AMTR_s00218p00027210 (evm_27.TU.AmTr_v1.0_scaffold00218.8)
 0.0 0.0 0.0 0.0 0.26 0.0 0.32 0.0 0.16 0.1 0.77 1.0 0.26 0.09 0.62 0.08 0.59 0.35 0.2 0.16 0.37 0.51
AMTR_s00239p00021140 (evm_27.TU.AmTr_v1.0_scaffold00239.4)
 1.0 0.29 0.31 0.13 0.1 0.02 0.05 0.12 0.09 0.12 0.51 0.66 0.58 0.46 0.45 0.47 0.36 0.42 0.33 0.41 0.2 0.41
AMTR_s04066p00009030 (evm_27.TU.AmTr_v1.0_scaffold04066.2)
 0.46 0.03 0.05 0.0 0.3 0.0 0.0 0.0 0.05 0.06 0.71 0.34 1.0 0.45 0.87 0.14 0.59 0.16 0.23 0.32 0.08 0.53
AMTR_s04354p00001030 (evm_27.TU.AmTr_v1.0_scaffold04354.1)
 0.0 0.0 0.0 0.0 0.01 0.0 0.0 0.0 0.0 0.0 1.0 0.69 0.85 0.85 0.14 0.0 0.05 0.0 0.19 0.0 0.18 0.12
AMTR_s05727p00005230 (evm_27.TU.AmTr_v1.0_scaffold05727.1)
 0.03 0.0 0.0 0.0 0.04 0.0 0.0 0.0 0.01 0.0 0.38 1.0 0.28 0.97 0.32 0.0 0.47 0.09 0.13 0.04 0.08 0.14

Details

Expression values normalized per gene (using the maximum value, Green cells indicate low expression and red high. (Dark gray cells indicate missing values)