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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Synchronized diurnal culture 1h (CC-2895) | Synchronized diurnal culture 2h (CC-2895) | Synchronized diurnal culture 3h (CC-2895) | Synchronized diurnal culture 4h (CC-2895) | Synchronized diurnal culture 5h (CC-2895) | Synchronized diurnal culture 6h (CC-2895) | Synchronized diurnal culture 7h (CC-2895) | Synchronized diurnal culture 8h (CC-2895) | Synchronized diurnal culture 9h (CC-2895) | Synchronized diurnal culture 10h (CC-2895) | Synchronized diurnal culture 11h (CC-2895) | Synchronized diurnal culture 11.5h (CC-2895) | Synchronized diurnal culture 12h (CC-2895) | Synchronized diurnal culture 12.5h (CC-2895) | Synchronized diurnal culture 13h (CC-2895) | Synchronized diurnal culture 13.5h (CC-2895) | Synchronized diurnal culture 14h (CC-2895) | Synchronized diurnal culture 14.5h (CC-2895) | Synchronized diurnal culture 15h (CC-2895) | Synchronized diurnal culture 16h (CC-2895) | Synchronized diurnal culture 17h (CC-2895) | Synchronized diurnal culture 18h (CC-2895) | Synchronized diurnal culture 19h (CC-2895) | Synchronized diurnal culture 20h (CC-2895) | Synchronized diurnal culture 21h (CC-2895) | Synchronized diurnal culture 22h (CC-2895) | Synchronized diurnal culture 23h (CC-2895) | Synchronized diurnal culture 24h (CC-2895) | Nitrogen deficient 0min (wt, 2173) | Nitrogen deficient 8min (wt, 2173) | Nitrogen deficient 18min (wt, 2173) | Nitrogen deficient 45min (wt, 2173) | Nitrogen deficient 60min (wt, 2173) | Nitrogen minus 0h (sta_6) | Nitrogen minus 0.5h (sta_6) | Nitrogen minus 2h (sta_6) | Nitrogen minus 4h (sta_6) | Nitrogen minus 8h (sta_6) | Nitrogen minus 12h (sta_6) | Nitrogen minus 24h (sta_6) | Nitrogen minus 48h (sta_6) | Nitrogen starvation 0h (4A+, CC-4051) | Nitrogen starvation 0.5h (4A+, CC-4051) | Nitrogen starvation 10min (4A+, CC-4051) | Nitrogen starvation 1h (4A+, CC-4051) | Nitrogen starvation 2h (4A+, CC-4051) | Nitrogen starvation 6h (4A+, CC-4051) | Nitrogen starvation 8h (4A+, CC-4051) | Nitrogen starvation 24h (4A+, CC-4051) | Nitrogen starvation 48h (4A+, CC-4051) | Sulfur starvation 0h (4A+, CC-4051) | Sulfur starvation 0.5h (4A+, CC-4051) | Sulfur starvation 10min (4A+, CC-4051) | Sulfur starvation 1h (4A+, CC-4051) | Sulfur starvation 2h (4A+, CC-4051) | Sulfur starvation 6h (4A+, CC-4051) | Sulfur starvation 8h (4A+, CC-4051) | Sulfur starvation 24h (4A+, CC-4051) | Sulfur starvation 48h (4A+, CC-4051) | Copper deficient (wt, 2173) | Copper sufficient (wt, 2173) | Iron deprivation 0h (CC-4532) | Iron deprivation 0.5h (CC-4532) | Iron deprivation 1h (CC-4532) | Iron deprivation 2h (CC-4532) | Iron deprivation 4h (CC-4532) | Iron deprivation 8h (CC-4532) | Iron deprivation 12h (CC-4532) | Iron deprivation 24h (CC-4532) | Iron deprivation 48h (CC-4532) | Iron replete (wt, 2173) | Iron-deficient (wt, 2173) | Iron-limited (wt, 2173) | Zink minus (CC-4532) | Zink replete - early (CC-4532) | Zink replete - late (CC-4532) | Zink resupply 1.5h (CC-4532) | Zink resupply 3h (CC-4532) | Zink resupply 4.5h (CC-4532) | Zink resupply 12h (CC-4532) | Zink resupply 24h (CC-4532) | Vitamin B12 and thiamine 0h (A31) | Vitamin B12 and thiamine 0h (DHC16) | Vitamin B12 and thiamine 12h (A31) | Vitamin B12 and thiamine 12h (DHC16) | Vitamin B12 and thiamine 48h (A31) | Vitamin B12 and thiamine 48h (DHC16) | Hydrogen peroxide 0.5h (wt, 2173) | Hydrogen peroxide 0h (wt, 2173) | Hydrogen peroxide 1h (wt, 2173) | Rapamycin 0h (A31) | Rapamycin 0h (DHC16) | Rapamycin 2h (A31) | Rapamycin 8h (A31) | Rapamycin 12h (A31) | Rapamycin 12h (DHC16) | Rapamycin 48h (A31) | Rapamycin 48h (DHC16) | UV-B 1h (wt, CC-125) | BV IXa 0.1mM (4A+, CC-4051) | BV IXa 0.1mM (hmox1 mutant) | BV IXa 0mM (4A+, CC-4051) | BV IXa 0mM (hmox1 mutant) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2.45 | 1.64 | 0.95 | 0.33 | -0.45 | -0.12 | -0.17 | -0.21 | -0.3 | 0.35 | 0.45 | 0.46 | 0.25 | -1.41 | -1.69 | -1.28 | -1.03 | -1.14 | -0.94 | -0.89 | -0.82 | -0.61 | -0.43 | -0.57 | -0.47 | -0.17 | -0.09 | 0.2 | 0.65 | 0.87 | 1.07 | 0.96 | 0.88 | -0.67 | 0.09 | -0.48 | 0.24 | 0.27 | 0.27 | 0.19 | 0.48 | -0.61 | -1.02 | -0.58 | -1.1 | -1.03 | -0.03 | -0.02 | -0.03 | 0.09 | -0.14 | -0.05 | -0.36 | 0.19 | -0.78 | -0.7 | -0.21 | 0.78 | 0.95 | -1.39 | -1.47 | 0.73 | 0.75 | 0.84 | 0.43 | -0.14 | -0.24 | -0.06 | 0.25 | -0.38 | -0.94 | -0.92 | -0.84 | -0.98 | -0.99 | -1.37 | 0.07 | -0.5 | -0.56 | -1.06 | -0.79 | -1.52 | -2.14 | 0.1 | -0.6 | -1.02 | 1.16 | -0.38 | -0.78 | -0.16 | -1.52 | -2.14 | 0.37 | 0.47 | 0.1 | -0.6 | -1.02 | 1.16 | -0.81 | 0.13 | 0.13 | -0.03 | 0.16 | |
| 1.48 | 1.35 | 0.88 | 0.43 | 0.31 | 0.31 | 0.21 | 0.17 | -0.43 | 0.01 | -0.02 | 0.14 | 0.0 | -1.09 | -1.27 | -0.95 | -0.69 | -0.67 | -0.74 | -0.86 | -0.43 | 0.03 | -0.19 | -0.06 | -0.18 | -0.02 | -0.33 | 0.01 | 0.26 | 0.23 | -0.91 | 0.42 | 0.68 | -1.55 | -1.1 | -0.01 | 0.42 | 0.54 | 0.18 | -0.05 | -0.05 | -0.1 | -0.83 | -0.58 | 0.23 | 0.39 | 0.52 | 0.32 | 0.3 | 0.34 | 0.31 | 0.55 | -0.49 | 0.67 | -0.52 | 0.15 | 0.65 | 1.11 | 1.36 | -3.37 | -1.7 | -0.43 | 0.32 | 0.1 | -0.55 | -0.74 | -0.89 | -1.24 | -0.54 | -1.04 | -2.59 | -2.74 | -2.55 | -0.55 | -0.11 | -0.97 | 0.59 | 0.16 | 0.04 | -0.76 | -0.19 | -1.91 | -3.2 | 0.13 | -0.65 | -1.53 | 0.77 | 1.37 | 0.14 | 2.11 | -1.91 | -3.2 | -0.68 | 0.12 | 0.13 | -0.65 | -1.53 | 0.77 | -1.71 | 0.03 | 0.21 | -0.08 | 0.37 | |
| 2.89 | 1.45 | 0.84 | 0.27 | 0.0 | 0.12 | 0.03 | -0.72 | -1.26 | -0.23 | -0.06 | 0.0 | 0.32 | -2.97 | -1.7 | -2.39 | -2.27 | -2.2 | -2.22 | -2.6 | -2.42 | -1.72 | -1.63 | -1.65 | -1.92 | -2.04 | -0.86 | -0.32 | 1.54 | 1.17 | 1.3 | 0.87 | 0.94 | -0.27 | 0.67 | -0.99 | -0.52 | -0.19 | -0.07 | -0.0 | 0.62 | -1.06 | -0.79 | -0.92 | -1.41 | -1.55 | -0.41 | -0.45 | -0.55 | -0.56 | 1.18 | 1.49 | 0.87 | 1.54 | 0.53 | 0.32 | 0.84 | 1.22 | 1.34 | -1.11 | -0.86 | -0.53 | 0.16 | 0.68 | 0.52 | -0.66 | -1.18 | -1.32 | 0.05 | -1.49 | -1.06 | -0.91 | -1.13 | 0.12 | -0.15 | -0.55 | 1.22 | 0.57 | 0.31 | -0.24 | 0.23 | -2.63 | -3.65 | -0.33 | -1.03 | -2.05 | -0.68 | 0.53 | 0.25 | -0.06 | -2.63 | -3.65 | -0.59 | -0.53 | -0.33 | -1.03 | -2.05 | -0.68 | -1.39 | -0.13 | -0.17 | -0.44 | 0.03 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.