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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Synchronized diurnal culture 1h (CC-2895) | Synchronized diurnal culture 2h (CC-2895) | Synchronized diurnal culture 3h (CC-2895) | Synchronized diurnal culture 4h (CC-2895) | Synchronized diurnal culture 5h (CC-2895) | Synchronized diurnal culture 6h (CC-2895) | Synchronized diurnal culture 7h (CC-2895) | Synchronized diurnal culture 8h (CC-2895) | Synchronized diurnal culture 9h (CC-2895) | Synchronized diurnal culture 10h (CC-2895) | Synchronized diurnal culture 11h (CC-2895) | Synchronized diurnal culture 11.5h (CC-2895) | Synchronized diurnal culture 12h (CC-2895) | Synchronized diurnal culture 12.5h (CC-2895) | Synchronized diurnal culture 13h (CC-2895) | Synchronized diurnal culture 13.5h (CC-2895) | Synchronized diurnal culture 14h (CC-2895) | Synchronized diurnal culture 14.5h (CC-2895) | Synchronized diurnal culture 15h (CC-2895) | Synchronized diurnal culture 16h (CC-2895) | Synchronized diurnal culture 17h (CC-2895) | Synchronized diurnal culture 18h (CC-2895) | Synchronized diurnal culture 19h (CC-2895) | Synchronized diurnal culture 20h (CC-2895) | Synchronized diurnal culture 21h (CC-2895) | Synchronized diurnal culture 22h (CC-2895) | Synchronized diurnal culture 23h (CC-2895) | Synchronized diurnal culture 24h (CC-2895) | Nitrogen deficient 0min (wt, 2173) | Nitrogen deficient 8min (wt, 2173) | Nitrogen deficient 18min (wt, 2173) | Nitrogen deficient 45min (wt, 2173) | Nitrogen deficient 60min (wt, 2173) | Nitrogen minus 0h (sta_6) | Nitrogen minus 0.5h (sta_6) | Nitrogen minus 2h (sta_6) | Nitrogen minus 4h (sta_6) | Nitrogen minus 8h (sta_6) | Nitrogen minus 12h (sta_6) | Nitrogen minus 24h (sta_6) | Nitrogen minus 48h (sta_6) | Nitrogen starvation 0h (4A+, CC-4051) | Nitrogen starvation 0.5h (4A+, CC-4051) | Nitrogen starvation 10min (4A+, CC-4051) | Nitrogen starvation 1h (4A+, CC-4051) | Nitrogen starvation 2h (4A+, CC-4051) | Nitrogen starvation 6h (4A+, CC-4051) | Nitrogen starvation 8h (4A+, CC-4051) | Nitrogen starvation 24h (4A+, CC-4051) | Nitrogen starvation 48h (4A+, CC-4051) | Sulfur starvation 0h (4A+, CC-4051) | Sulfur starvation 0.5h (4A+, CC-4051) | Sulfur starvation 10min (4A+, CC-4051) | Sulfur starvation 1h (4A+, CC-4051) | Sulfur starvation 2h (4A+, CC-4051) | Sulfur starvation 6h (4A+, CC-4051) | Sulfur starvation 8h (4A+, CC-4051) | Sulfur starvation 24h (4A+, CC-4051) | Sulfur starvation 48h (4A+, CC-4051) | Copper deficient (wt, 2173) | Copper sufficient (wt, 2173) | Iron deprivation 0h (CC-4532) | Iron deprivation 0.5h (CC-4532) | Iron deprivation 1h (CC-4532) | Iron deprivation 2h (CC-4532) | Iron deprivation 4h (CC-4532) | Iron deprivation 8h (CC-4532) | Iron deprivation 12h (CC-4532) | Iron deprivation 24h (CC-4532) | Iron deprivation 48h (CC-4532) | Iron replete (wt, 2173) | Iron-deficient (wt, 2173) | Iron-limited (wt, 2173) | Zink minus (CC-4532) | Zink replete - early (CC-4532) | Zink replete - late (CC-4532) | Zink resupply 1.5h (CC-4532) | Zink resupply 3h (CC-4532) | Zink resupply 4.5h (CC-4532) | Zink resupply 12h (CC-4532) | Zink resupply 24h (CC-4532) | Vitamin B12 and thiamine 0h (A31) | Vitamin B12 and thiamine 0h (DHC16) | Vitamin B12 and thiamine 12h (A31) | Vitamin B12 and thiamine 12h (DHC16) | Vitamin B12 and thiamine 48h (A31) | Vitamin B12 and thiamine 48h (DHC16) | Hydrogen peroxide 0.5h (wt, 2173) | Hydrogen peroxide 0h (wt, 2173) | Hydrogen peroxide 1h (wt, 2173) | Rapamycin 0h (A31) | Rapamycin 0h (DHC16) | Rapamycin 2h (A31) | Rapamycin 8h (A31) | Rapamycin 12h (A31) | Rapamycin 12h (DHC16) | Rapamycin 48h (A31) | Rapamycin 48h (DHC16) | UV-B 1h (wt, CC-125) | BV IXa 0.1mM (4A+, CC-4051) | BV IXa 0.1mM (hmox1 mutant) | BV IXa 0mM (4A+, CC-4051) | BV IXa 0mM (hmox1 mutant) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| - | - | - | -0.35 | 0.96 | -0.19 | - | - | - | - | - | 3.3 | - | - | 0.15 | -0.23 | -0.84 | - | -1.14 | 2.11 | - | - | 2.21 | - | 2.31 | - | 1.39 | 0.12 | - | - | - | - | - | 0.44 | - | 1.14 | - | 1.19 | 2.36 | -0.23 | 0.13 | -1.55 | 0.25 | - | 2.1 | -0.76 | 0.29 | 1.06 | 1.48 | 0.29 | 1.22 | 1.47 | 1.4 | 0.34 | 1.09 | 1.5 | 2.5 | 2.92 | 1.92 | - | 0.62 | - | - | - | - | - | - | - | - | - | -0.76 | -0.69 | -0.42 | - | -0.93 | - | - | -0.95 | - | -0.85 | - | -1.3 | -1.13 | - | - | - | - | 0.31 | 0.8 | 0.29 | -1.3 | -1.13 | - | - | - | - | - | - | - | -1.38 | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | 4.8 | - | - | - | - | 2.26 | - | - | - | - | - | - | 0.12 | 2.58 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.3 | -0.98 | - | -0.17 | 1.13 | - | - | - | - | -0.54 | 2.14 | - | -0.26 | 2.79 | 2.84 | 1.16 | 2.98 | 3.37 | - | - | - | - | - | - | - | - | - | - | 0.81 | - | - | - | - | - | - | - | - | - | - | - | 0.23 | 0.36 | 1.34 | - | - | - | - | - | - | 0.23 | 0.36 | 1.35 | - | 1.34 | - | - | - | 0.28 | - | - | 0.42 | - | |
| - | 2.58 | 1.18 | - | - | - | - | - | - | 1.93 | - | 3.49 | 1.78 | 2.67 | 0.11 | - | 0.82 | - | 3.17 | - | 1.02 | - | - | 0.48 | 1.08 | 1.92 | 2.75 | 2.14 | - | - | - | - | - | - | 1.19 | - | - | 1.1 | -0.64 | - | 0.22 | 0.41 | -0.45 | -1.12 | -1.27 | 0.05 | 0.84 | -0.82 | 0.93 | 0.63 | - | - | 0.44 | -1.07 | -1.08 | 1.19 | 2.57 | -0.48 | -0.68 | - | 1.23 | - | - | - | - | 1.15 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.78 | - | - | - | - | - | - | - | - | - | 0.08 | - | -0.39 | - | |
| - | - | - | - | - | - | - | - | - | - | - | 4.79 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 2.09 | - | - | 1.69 | - | - | - | 1.02 | 0.69 | 2.26 | 4.01 | 3.54 | 2.71 | -0.23 | - | 1.38 | - | - | -0.43 | - | 0.83 | - | - | - | -0.09 | - | - | - | 3.3 | - | - | - | - | - | - | - | - | - | - | 0.12 | - | - | - | - | - | - | - | -0.01 | 1.44 | - | - | - | - | - | - | - | -0.01 | 1.44 | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | 6.25 | - | - | 2.88 | - | - | - | - | - | - | 3.09 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.17 | - | - | 0.58 | - | - | - | - | - | - | 1.87 | - | 0.95 | 1.52 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | 3.6 | 4.45 | 2.48 | - | 2.4 | 2.18 | - | - | 0.26 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 2.54 | - | - | 1.91 | - | - | - | -1.09 | - | - | -0.75 | - | - | - | - | - | 1.7 | - | - | - | - | - | - | 1.02 | - | - | - | - | 2.13 | - | - | 1.03 | 1.16 | - | 1.11 | 1.65 | - | - | - | 1.32 | - | - | - | 0.55 | - | - | 0.12 | - | 1.21 | - | 0.36 | 0.78 | - | - | 1.22 | 0.12 | - | - | - | 1.21 | - | 0.36 | 0.78 | 1.18 | - | - | - | 0.33 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.