Heatmap: Cluster_167 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00001p00266950 (evm_27.TU.AmTr_v1.0_scaffold00001.411)
- - - - 3.54 - - - 3.38 - - - - - - - - - - - - -
AMTR_s00002p00045330 (evm_27.TU.AmTr_v1.0_scaffold00002.18)
- - - - 2.94 - 1.21 - 2.87 2.23 - - - - - - - - - - - -
AMTR_s00004p00269530 (evm_27.TU.AmTr_v1.0_scaffold00004.285)
- 2.95 - - 2.68 - - - - - - - - 1.06 0.97 - - - - 1.92 - -
AMTR_s00007p00145080 (evm_27.TU.AmTr_v1.0_scaffold00007.101)
- - - - 3.8 - - - - - - - 2.71 - 0.59 - - - - - - -
AMTR_s00008p00038760 (evm_27.TU.AmTr_v1.0_scaffold00008.11)
- - - - 3.63 - - - - - - - 3.27 - - - - - - - - -
AMTR_s00008p00063090 (evm_27.TU.AmTr_v1.0_scaffold00008.20)
- - - - 3.03 - - - - - - - 3.79 - - - - - - - - -
AMTR_s00008p00087280 (evm_27.TU.AmTr_v1.0_scaffold00008.31)
- - - - 2.62 - - - - - - - 3.58 - - - - - - 1.94 - -
AMTR_s00008p00260510 (evm_27.TU.AmTr_v1.0_scaffold00008.208)
- - - - 3.6 - - - 3.3 - - - - - - - - - - - - -
AMTR_s00011p00226910 (evm_27.TU.AmTr_v1.0_scaffold00011.102)
- - - - 3.62 - - - - - - - - - - - - - - 3.28 - -
AMTR_s00012p00139070 (evm_27.TU.AmTr_v1.0_scaffold00012.72)
- - - - 4.08 - - - - - - - 2.36 - - - - - - - - -
AMTR_s00012p00139600 (evm_27.TU.AmTr_v1.0_scaffold00012.73)
- - - - 3.01 - - - - - - - 2.03 -0.51 2.17 - - - - - - 2.22
AMTR_s00013p00131220 (evm_27.TU.AmTr_v1.0_scaffold00013.64)
1.25 - - - 2.46 - - - - - - - 3.27 - -1.12 - - - - 2.0 - -
AMTR_s00016p00244950 (evm_27.TU.AmTr_v1.0_scaffold00016.274)
- - - - 2.58 - - - - - - - 2.0 - - - - - 2.18 2.91 - -
AMTR_s00025p00246110 (evm_27.TU.AmTr_v1.0_scaffold00025.392)
- - - -0.01 2.68 - 1.8 - 1.07 1.78 - - -0.71 -0.03 1.16 - - - - - - 0.81
AMTR_s00028p00112370 (evm_27.TU.AmTr_v1.0_scaffold00028.34)
- - - - 2.58 - -0.47 - -1.1 - - - - - -0.0 - - - 3.09 2.02 - 0.32
AMTR_s00029p00133090 (evm_27.TU.AmTr_v1.0_scaffold00029.151)
- - - - 3.12 - - - - 1.96 - - 2.11 - 2.36 - - - - - - -
AMTR_s00030p00104460 (evm_27.TU.AmTr_v1.0_scaffold00030.48)
- - - - 3.57 - - - - 3.34 - - - - - - - - - - - -
AMTR_s00033p00203710 (evm_27.TU.AmTr_v1.0_scaffold00033.175)
- - - - 3.98 - - - 2.63 - - - - - - - - - - - - -
AMTR_s00041p00147750 (evm_27.TU.AmTr_v1.0_scaffold00041.103)
- - - - 3.12 - - - 1.18 1.82 - - 2.08 1.7 - - - - - - - -
AMTR_s00045p00143760 (evm_27.TU.AmTr_v1.0_scaffold00045.151)
- - - - 1.81 - - - - - - - - - 3.07 - - - - - - 3.33
AMTR_s00047p00187650 (evm_27.TU.AmTr_v1.0_scaffold00047.116)
- - - - 3.82 - 1.26 - - 2.46 - - - - - - - - - - - -
AMTR_s00049p00116950 (evm_27.TU.AmTr_v1.0_scaffold00049.92)
- -2.72 1.9 - 1.59 - -1.61 - -0.57 -1.27 -0.21 -0.39 1.42 0.15 -0.38 - -0.94 -0.58 - 0.17 2.07 -0.01
AMTR_s00053p00148120 (evm_27.TU.AmTr_v1.0_scaffold00053.94)
- - - - 3.95 - - - - - - - - - - - - - - 2.71 - -
AMTR_s00057p00060440 (evm_27.TU.AmTr_v1.0_scaffold00057.37)
- - - - 2.82 - - - - - - - 2.77 - 3.02 - - - - - - -
AMTR_s00057p00163750 (evm_27.TU.AmTr_v1.0_scaffold00057.157)
- - - - 3.75 - - - - 1.95 - - 2.23 - - - - - - - - -
AMTR_s00060p00101380 (evm_27.TU.AmTr_v1.0_scaffold00060.45)
- - - - 3.57 - - - - 3.34 - - - - - - - - - - - -
AMTR_s00066p00142310 (evm_27.TU.AmTr_v1.0_scaffold00066.142)
- - - - 3.53 - - - - - - - 3.38 - - - - - - - - -
AMTR_s00067p00063400 (evm_27.TU.AmTr_v1.0_scaffold00067.39)
- - - - 3.42 - - - - 3.5 - - - - - - - - - - - -
AMTR_s00072p00153210 (evm_27.TU.AmTr_v1.0_scaffold00072.88)
- - - - 4.14 - - - - - - - 2.11 - - - - - - - - -
AMTR_s00074p00121480 (evm_27.TU.AmTr_v1.0_scaffold00074.37)
- - - 1.78 2.81 - 0.19 - -0.9 -0.07 - - 1.4 0.46 0.36 - - - - 0.73 - 0.99
AMTR_s00074p00172200 (evm_27.TU.AmTr_v1.0_scaffold00074.84)
- - - - 3.05 - - - -0.24 - - - 1.2 - - - 1.91 - 2.44 0.5 - -
AMTR_s00076p00112190 (evm_27.TU.AmTr_v1.0_scaffold00076.34)
- - - - 3.59 - - - - - - - 3.32 - - - - - - - - -
AMTR_s00078p00152820 (evm_27.TU.AmTr_v1.0_scaffold00078.129)
- - - - 4.14 - - - - - - - 2.14 - - - - - - - - -
AMTR_s00079p00176960 (evm_27.TU.AmTr_v1.0_scaffold00079.96)
- - - - 3.03 - - - - - - - 3.79 - - - - - - - - -
AMTR_s00085p00076310 (evm_27.TU.AmTr_v1.0_scaffold00085.37)
- - - - 4.14 - - - - - - - 2.12 - - - - - - - - -
AMTR_s00089p00067660 (evm_27.TU.AmTr_v1.0_scaffold00089.26)
- - - - 3.35 - - - 1.99 - - - 2.3 - 1.56 - - - - - - -
AMTR_s00095p00158250 (evm_27.TU.AmTr_v1.0_scaffold00095.136)
- - - - 3.06 - 2.26 - -3.29 -2.55 - - 2.99 -3.01 -0.9 - - - - - - -
AMTR_s00098p00075150 (evm_27.TU.AmTr_v1.0_scaffold00098.11)
- - - - 4.02 - - - - - - - 2.52 - - - - - - - - -
AMTR_s00101p00034540 (evm_27.TU.AmTr_v1.0_scaffold00101.9)
- - - - 3.36 - - - - - - - 3.09 -0.16 1.24 - - - - - - -
AMTR_s00111p00124560 (evm_27.TU.AmTr_v1.0_scaffold00111.98)
- - - - 2.59 - 1.18 - -0.99 0.7 - - - 1.27 0.09 - 1.9 - - 1.67 - 0.28
AMTR_s00126p00125800 (evm_27.TU.AmTr_v1.0_scaffold00126.64)
- - - - 1.88 - 1.57 - 0.75 2.61 - - - - 2.53 - - - - - - 0.84
AMTR_s00132p00036820 (evm_27.TU.AmTr_v1.0_scaffold00132.6)
- - - - 3.56 - - - - 3.35 - - - - - - - - - - - -
AMTR_s00179p00033070 (evm_27.TU.AmTr_v1.0_scaffold00179.6)
- - - - 4.05 - - - - - - - 2.45 - - - - - - - - -
AMTR_s00180p00022660 (evm_27.TU.AmTr_v1.0_scaffold00180.7)
- - - - 2.88 - - - 1.94 2.71 - - - - 2.1 - - - - - - -
AMTR_s00190p00047090 (evm_27.TU.AmTr_v1.0_scaffold00190.19)
- - - - 3.5 - - - - 3.41 - - - - - - - - - - - -
AMTR_s00194p00025300 (evm_27.TU.AmTr_v1.0_scaffold00194.10)
- - 3.85 - 2.93 - - - - - - - - - - - - - - - - -
AMTR_s00194p00040050 (evm_27.TU.AmTr_v1.0_scaffold00194.18)
- - - - 3.71 - - - - 3.15 - - - - - - - - - -11.55 - -
AMTR_s00200p00028910 (evm_27.TU.AmTr_v1.0_scaffold00200.11)
- - - - 2.78 - - - - - - - 3.88 - -1.13 - - - - - - -
AMTR_s00206p00029970 (evm_27.TU.AmTr_v1.0_scaffold00206.5)
- - - - 3.54 - - - - 3.37 - - - - - - - - - - - -
AMTR_s00224p00028340 (evm_27.TU.AmTr_v1.0_scaffold00224.11)
- - - - 3.72 - - - 1.78 2.42 - - - - - - - - - - - -
AMTR_s00233p00006370 (evm_27.TU.AmTr_v1.0_scaffold00233.1)
- - 1.37 - 1.8 - -4.43 - -1.73 -2.36 -0.14 - 0.53 0.19 0.15 -0.52 0.06 0.85 0.34 -0.98 2.02 0.5
AMTR_s00244p00012340 (evm_27.TU.AmTr_v1.0_scaffold00244.2)
0.09 - -0.87 -1.99 2.78 1.42 -2.81 - - - 0.26 - 2.65 - -1.19 - - - 0.68 -0.12 - -
AMTR_s00948p00010970 (evm_27.TU.AmTr_v1.0_scaffold00948.1)
- - - - 2.7 - - -0.79 - -1.55 - - 3.5 -1.47 -0.59 - - - - -0.61 - 0.69
AMTR_s01536p00009150 (evm_27.TU.AmTr_v1.0_scaffold01536.1)
- - 3.8 - 3.01 - - - - - - - - - - - - - - - - -
AMTR_s01623p00005280 (evm_27.TU.AmTr_v1.0_scaffold01623.1)
- - - - 2.65 - 0.1 - 0.93 3.07 - - -0.04 0.73 - - - - - - - 0.8
AMTR_s02708p00006340 (evm_27.TU.AmTr_v1.0_scaffold02708.1)
- - - - - - - - - - - - 3.56 - - - - - - - - 3.35
AMTR_s02817p00007570 (evm_27.TU.AmTr_v1.0_scaffold02817.1)
- - 3.31 - 2.65 - - - - - - - 2.5 - -2.56 - - - - - - -
AMTR_s03230p00001990 (evm_27.TU.AmTr_v1.0_scaffold03230.1)
- - - - 3.46 - - - - - - - 3.46 - - - - - - - - -
AMTR_s03929p00006520 (evm_27.TU.AmTr_v1.0_scaffold03929.1)
- - - - 4.46 - - - - - - - - - - - - - - - - -
AMTR_s04541p00004770 (evm_27.TU.AmTr_v1.0_scaffold04541.1)
- - 3.27 - 3.63 - - - - - - - - - - - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.