Heatmap: Cluster_168 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00002p00270270 (evm_27.TU.AmTr_v1.0_scaffold00002.575)
- - - - 4.37 - - - -1.2 -3.27 - - - -2.49 -0.67 - - - - - - -
AMTR_s00003p00093520 (evm_27.TU.AmTr_v1.0_scaffold00003.56)
- - - - 3.14 - -1.59 - -1.27 -0.9 -0.16 - -2.21 -0.8 1.31 - - - - -1.67 2.82 -1.44
AMTR_s00004p00140190 (evm_27.TU.AmTr_v1.0_scaffold00004.135)
- -3.5 - - 3.67 - - - - -4.9 -2.24 0.54 -3.0 -4.8 2.34 - - - 1.19 - - -
- - - -5.74 4.4 - - - -3.75 -3.0 - - -6.62 -6.84 -4.16 - - -1.86 - - -2.02 -
AMTR_s00008p00134760 (evm_27.TU.AmTr_v1.0_scaffold00008.62)
- - - - 3.75 - - - - - - - - - 3.09 - - - - - - -
AMTR_s00008p00247560 (evm_27.TU.AmTr_v1.0_scaffold00008.181)
- - - - 4.46 - - - - - - - - - - - - - - - - -
AMTR_s00009p00262950 (evm_27.TU.AmTr_v1.0_scaffold00009.352)
- - - - 4.16 - -4.34 - - -4.61 -1.31 0.43 -3.84 - -0.16 -0.14 -1.71 - - -3.67 - -
AMTR_s00014p00160370 (evm_27.TU.AmTr_v1.0_scaffold00014.54)
- - - - 4.46 - - - - - - - - - - - - - - - - -
AMTR_s00014p00169490 (evm_27.TU.AmTr_v1.0_scaffold00014.57)
- - - - 4.26 - - - - - - - - - 1.48 - - - - - - -
AMTR_s00015p00257710 (evm_27.TU.AmTr_v1.0_scaffold00015.114)
- - - -1.82 4.09 - -2.5 - 1.36 0.34 - - - - -0.65 - - - - - - -
- - - - 3.56 - -0.31 - -0.18 -0.31 0.54 0.53 -0.68 -0.28 0.11 - -2.6 -0.66 -1.82 -2.19 - -0.04
AMTR_s00016p00098710 (evm_27.TU.AmTr_v1.0_scaffold00016.59)
- - - -4.59 3.21 - -0.1 - -0.06 0.07 0.66 0.98 -0.48 -0.09 -0.14 -2.17 -0.05 -1.8 -0.87 -2.85 -0.95 -0.06
AMTR_s00017p00057650 (evm_27.TU.AmTr_v1.0_scaffold00017.18)
- - - - 4.38 - - - - - - - - - 0.17 - - - - - - -
AMTR_s00020p00079570 (evm_27.TU.AmTr_v1.0_scaffold00020.30)
- - - - 3.83 - 0.15 - -0.82 -1.43 - - - -1.23 0.36 - - - - -1.97 1.79 -1.67
AMTR_s00021p00152600 (evm_27.TU.AmTr_v1.0_scaffold00021.108)
- - - - 4.43 - - -4.39 -3.66 -2.44 -3.17 - - - -4.94 - - - - - - -
AMTR_s00021p00213150 (evm_27.TU.AmTr_v1.0_scaffold00021.187)
- - - - 4.21 - - - - - - - -0.25 - -0.6 - - - - 1.02 - -
AMTR_s00026p00071530 (evm_27.TU.AmTr_v1.0_scaffold00026.26)
- - - - 4.16 - -1.13 - -0.99 -1.44 - - -1.7 -2.8 0.77 - - - - - - -0.66
AMTR_s00026p00202960 (evm_27.TU.AmTr_v1.0_scaffold00026.106)
- - - - 4.46 - - - - - - - - - - - - - - - - -
AMTR_s00033p00217590 (evm_27.TU.AmTr_v1.0_scaffold00033.194)
- - - - 4.41 - - - - - - - - - -0.31 - - - - - - -
AMTR_s00037p00229470 (evm_27.TU.AmTr_v1.0_scaffold00037.139)
- - - - 4.46 - - - - - - - - - - - - - - - - -
AMTR_s00040p00125500 (evm_27.TU.AmTr_v1.0_scaffold00040.93)
- - - -6.31 3.9 - - -4.68 -6.8 -4.9 -1.28 0.32 -3.23 - -6.01 -0.25 -3.99 0.28 0.53 -1.94 0.38 -4.38
- - - - 4.46 - - - - - - - - - - - - - - - - -
AMTR_s00049p00184230 (evm_27.TU.AmTr_v1.0_scaffold00049.182)
- - - - 3.22 - -3.46 - -3.24 -1.0 - 1.36 - -3.66 1.69 - - - - - 2.6 -
AMTR_s00054p00077630 (evm_27.TU.AmTr_v1.0_scaffold00054.25)
- - - - 4.42 - - - - - - - -1.51 - -3.26 - - - - -2.7 - -
AMTR_s00060p00140410 (evm_27.TU.AmTr_v1.0_scaffold00060.80)
- - - - 4.46 - - - - - - - - - - - - - - - - -
AMTR_s00060p00211550 (evm_27.TU.AmTr_v1.0_scaffold00060.156)
- - - - 3.22 - - - - - - - - 1.1 1.76 - - - - - 2.84 -
AMTR_s00062p00071490 (evm_27.TU.AmTr_v1.0_scaffold00062.43)
- - - - 4.32 - - - - - - - - - 1.0 - - - - - - -
AMTR_s00063p00188450 (evm_27.TU.AmTr_v1.0_scaffold00063.71)
- - - - 4.25 - - - 1.11 - - - - -0.2 - - - - - - - -
AMTR_s00066p00173450 (evm_27.TU.AmTr_v1.0_scaffold00066.202)
- - - - 4.33 - 0.93 - - - - - - - - - - - - - - -
AMTR_s00067p00132300 (evm_27.TU.AmTr_v1.0_scaffold00067.114)
- - - - 3.87 - -0.19 - 1.87 - - - - - 1.52 - - - - - - -
AMTR_s00071p00185000 (evm_27.TU.AmTr_v1.0_scaffold00071.192)
- - - - 4.46 - - - - - - - - - - - - - - - - -
AMTR_s00088p00165570 (evm_27.TU.AmTr_v1.0_scaffold00088.138)
- - - - 4.17 - - - - - - - - - 2.01 - - - - - - -
- - - - 4.44 - - -4.22 -7.11 -3.16 - - -7.22 -6.45 -3.06 - - - - - - -
AMTR_s00099p00148050 (evm_27.TU.AmTr_v1.0_scaffold00099.134)
- - - - 4.07 - - -4.81 -4.41 -2.16 -1.27 0.15 -0.98 -5.86 -3.06 - -2.4 0.76 -0.7 -3.34 - -2.87
AMTR_s00103p00152270 (evm_27.TU.AmTr_v1.0_scaffold00103.112)
- - - - 4.34 - - - - - - - 0.81 - - - - - - - - -
AMTR_s00123p00073730 (evm_27.TU.AmTr_v1.0_scaffold00123.9)
- - - - 3.79 - - - - - - - 0.58 -0.48 2.0 - - - - 0.96 - -
AMTR_s00129p00079230 (evm_27.TU.AmTr_v1.0_scaffold00129.52)
- - - 0.54 4.28 - - - - - - - -2.26 -0.66 -1.63 - - - - - - -
- - - 0.52 4.31 - -4.06 - -4.45 -3.71 - - -3.66 - -1.84 - - - - -2.36 - -
AMTR_s00133p00025740 (evm_27.TU.AmTr_v1.0_scaffold00133.3)
- - - - 3.64 - - - - - - - - - 2.11 - - - - - - 2.38
AMTR_s00144p00049150 (evm_27.TU.AmTr_v1.0_scaffold00144.21)
- - - - 4.3 - - - -3.1 - - - - - -1.94 - 0.93 - - - - -
AMTR_s00146p00033340 (evm_27.TU.AmTr_v1.0_scaffold00146.14)
-4.51 -4.23 - - 4.1 - -6.29 -4.36 -4.06 -2.01 -0.64 -1.27 -3.43 -3.14 -2.84 -1.85 -1.47 -0.9 -3.55 -0.31 -3.64 -0.31
AMTR_s00156p00021000 (evm_27.TU.AmTr_v1.0_scaffold00156.5)
- - - - 4.17 - - - 0.48 -0.19 - - - - 0.82 - - - - - - -
AMTR_s00157p00065740 (evm_27.TU.AmTr_v1.0_scaffold00157.35)
- - - - 3.99 - -1.13 - -2.52 -2.13 0.42 - -0.36 -1.92 -0.81 - 0.2 - 0.01 - - -2.41
AMTR_s00180p00026970 (evm_27.TU.AmTr_v1.0_scaffold00180.12)
- - - - 3.91 - -1.45 - - - - - - - 2.72 - - - - - - -
AMTR_s00185p00019860 (evm_27.TU.AmTr_v1.0_scaffold00185.5)
- - - - 4.31 - - - - - -0.35 - - - 0.4 - - - - - - -
AMTR_s00226p00019000 (evm_27.TU.AmTr_v1.0_scaffold00226.8)
- - - - 4.26 - - - - - - - - - -0.08 - - - - 0.88 - -
AMTR_s00721p00008940 (evm_27.TU.AmTr_v1.0_scaffold00721.1)
- - - - 4.46 - - - - - - - - - - - - - - - - -
AMTR_s01768p00009690 (evm_27.TU.AmTr_v1.0_scaffold01768.1)
- - - - 4.46 - - - - - - - - - - - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.