Heatmap: Cluster_9 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00001p00031070 (evm_27.TU.AmTr_v1.0_scaffold00001.14)
- - - - 4.11 - 2.24 - - - - - - - - - - - - - - -
AMTR_s00001p00132240 (evm_27.TU.AmTr_v1.0_scaffold00001.107)
- - - - 3.66 - - - - - - - - - - - - - - - - 3.22
AMTR_s00001p00150600 (evm_27.TU.AmTr_v1.0_scaffold00001.133)
- - - - 3.91 - - - - - - - - - - - - - - - - 2.8
AMTR_s00001p00233850 (evm_27.TU.AmTr_v1.0_scaffold00001.254)
- - - - 2.83 - 0.65 - -0.08 -0.08 - - 0.23 - -2.68 - 1.16 - - -0.34 - 2.83
AMTR_s00001p00234320 (evm_27.TU.AmTr_v1.0_scaffold00001.261)
- - - - 2.68 - - - - - -0.09 - -0.65 - 0.71 - - - - -0.04 - 3.51
AMTR_s00001p00269070 (evm_27.TU.AmTr_v1.0_scaffold00001.430)
- - - - 2.66 - - - - - - - - - - - - - - - - 3.97
AMTR_s00001p00269100 (evm_27.TU.AmTr_v1.0_scaffold00001.431)
- - - - 2.16 - - - - -0.4 - - - - - - - - - - - 4.07
AMTR_s00001p00272420 (evm_27.TU.AmTr_v1.0_scaffold00001.526)
- - - - - - - - - - - - 2.31 2.66 2.57 - - - - - - 2.26
AMTR_s00001p00272930 (evm_27.TU.AmTr_v1.0_scaffold00001.577)
- - - - 3.36 - - - -0.22 -1.45 - - 2.64 0.2 -0.47 - - - - 0.56 - -0.15
AMTR_s00002p00074380 (evm_27.TU.AmTr_v1.0_scaffold00002.36)
- - - - 2.46 - - - - 2.16 - - 1.98 - - - - - - - - 3.01
AMTR_s00003p00270280 (evm_27.TU.AmTr_v1.0_scaffold00003.430)
- - - - 4.21 - - - - - - - - - - - - - - - - 1.8
AMTR_s00004p00120220 (evm_27.TU.AmTr_v1.0_scaffold00004.104)
- - - - 2.75 - - - - - - - - - - - - - - - - 3.93
AMTR_s00004p00167380 (evm_27.TU.AmTr_v1.0_scaffold00004.184)
- - - - 3.7 - - - - - - - - 1.91 - - - - - - - 2.39
AMTR_s00006p00065850 (evm_27.TU.AmTr_v1.0_scaffold00006.22)
- - - - 3.87 - - - - - - - - - - - - - - - - 2.88
AMTR_s00006p00091380 (evm_27.TU.AmTr_v1.0_scaffold00006.32)
- - - - 1.6 - - - - - - - - - 1.99 - - - - - - 3.91
AMTR_s00007p00260570 (evm_27.TU.AmTr_v1.0_scaffold00007.325)
- - - - -0.58 - - - - -2.74 1.97 - -0.91 - - - - 2.52 - -2.34 - 3.44
AMTR_s00007p00264290 (evm_27.TU.AmTr_v1.0_scaffold00007.347)
- - - - 3.16 - 1.67 - 0.9 - - - - 0.46 - - - - - - - 2.73
AMTR_s00007p00268000 (evm_27.TU.AmTr_v1.0_scaffold00007.385)
- - - - 3.45 - 0.93 - 1.11 -1.96 - - -0.66 -1.88 2.12 - - - - 0.58 - -
AMTR_s00008p00221460 (evm_27.TU.AmTr_v1.0_scaffold00008.137)
- - - - 3.81 - - - - - - - 3.0 - - - - - - - - -
AMTR_s00008p00248660 (evm_27.TU.AmTr_v1.0_scaffold00008.183)
- - - 0.62 3.28 - - - - - - - - - - - - - - - - 3.43
AMTR_s00009p00121430 (evm_27.TU.AmTr_v1.0_scaffold00009.62)
- - - - 4.05 - - - - - - - - - - - - - - -0.9 - 2.31
AMTR_s00010p00070590 (evm_27.TU.AmTr_v1.0_scaffold00010.42)
- - - - 3.68 - 3.19 - - - - - - - - - - - - - - -
AMTR_s00011p00191260 (evm_27.TU.AmTr_v1.0_scaffold00011.57)
- - - 0.17 1.99 - -2.93 - -1.86 - - 1.54 0.47 -2.94 0.85 - - - - - - 3.36
AMTR_s00011p00264640 (evm_27.TU.AmTr_v1.0_scaffold00011.212)
- - - - 3.4 - - - - - - - 3.52 - - - - - - - - -
AMTR_s00012p00263970 (evm_27.TU.AmTr_v1.0_scaffold00012.352)
- - - - - - - - - - 2.34 - -0.27 0.96 1.22 - - - - - - 3.57
AMTR_s00016p00045680 (evm_27.TU.AmTr_v1.0_scaffold00016.18)
- - - 2.01 3.63 - - - - - - - 2.49 - - - - - - - - -
AMTR_s00016p00052620 (evm_27.TU.AmTr_v1.0_scaffold00016.19)
- - - - 3.85 - - - - - - - 2.92 - - - - - - - - -
AMTR_s00016p00099330 (evm_27.TU.AmTr_v1.0_scaffold00016.60)
- - - - 3.34 - - - - - - - 0.9 1.54 - - - - - -0.4 - 2.66
AMTR_s00016p00177650 (evm_27.TU.AmTr_v1.0_scaffold00016.138)
- - - - - - - - - - 3.26 1.33 - - - - - - - - - 3.31
AMTR_s00017p00214530 (evm_27.TU.AmTr_v1.0_scaffold00017.141)
- - - - 3.31 - - - - 0.68 - - - - 1.12 - - - - - - 3.05
AMTR_s00018p00083570 (evm_27.TU.AmTr_v1.0_scaffold00018.34)
- - - - 3.61 - - - - -3.09 -0.35 1.43 -3.38 -1.7 -0.58 - - - - - - 2.35
AMTR_s00018p00086050 (evm_27.TU.AmTr_v1.0_scaffold00018.36)
- - - - 2.74 - - - - - - - 2.69 - - - - - - - - 3.15
AMTR_s00019p00055750 (evm_27.TU.AmTr_v1.0_scaffold00019.33)
- - - - 2.62 - - - - - - - - - - - - - - - - 3.98
AMTR_s00019p00185850 (evm_27.TU.AmTr_v1.0_scaffold00019.201)
- - - - 2.83 - - -0.53 - - - - - - - 1.85 - - - - - 3.41
AMTR_s00019p00250330 (evm_27.TU.AmTr_v1.0_scaffold00019.408)
- - - -0.09 - - - - - -5.64 1.51 2.53 -2.44 -4.94 -3.6 - -3.77 0.34 0.4 - - 3.24
AMTR_s00022p00115300 (evm_27.TU.AmTr_v1.0_scaffold00022.106)
- - - - 2.08 - -1.66 - -0.95 -0.97 -2.17 -1.41 0.28 -2.48 1.03 - -0.9 - -1.05 0.56 0.57 3.07
AMTR_s00022p00150400 (evm_27.TU.AmTr_v1.0_scaffold00022.147)
- - - - 3.31 - - - -1.46 - - - -0.49 -0.19 0.62 - - - - - - 3.1
AMTR_s00022p00160220 (evm_27.TU.AmTr_v1.0_scaffold00022.162)
- - - - 3.6 - - - - - - - 3.3 - - - - - - - - -
AMTR_s00022p00220540 (evm_27.TU.AmTr_v1.0_scaffold00022.274)
- - - - 3.3 - - - - - - - 3.6 - - - - - - - - -
AMTR_s00023p00074270 (evm_27.TU.AmTr_v1.0_scaffold00023.38)
- - - - 3.33 - - - -1.04 - - - - - 0.69 - 0.87 - - - - 3.01
AMTR_s00023p00189680 (evm_27.TU.AmTr_v1.0_scaffold00023.127)
- - - - 3.5 - - - - 0.4 - - - - - - - - - - - 3.23
AMTR_s00025p00245200 (evm_27.TU.AmTr_v1.0_scaffold00025.388)
- - - - 3.61 - - - - - - - - 1.18 1.82 - - - - - - 2.01
AMTR_s00027p00234130 (evm_27.TU.AmTr_v1.0_scaffold00027.119)
- - - - 2.6 - 1.11 - - - - - 1.49 - 2.8 - - - - - - 2.01
AMTR_s00030p00111560 (evm_27.TU.AmTr_v1.0_scaffold00030.55)
- - - - 3.68 - - - - - - - 3.2 - - - - - - - - -
AMTR_s00030p00243810 (evm_27.TU.AmTr_v1.0_scaffold00030.217)
- - - - 2.73 - - - - - - - - - -0.59 - - - - - - 3.88
AMTR_s00032p00228800 (evm_27.TU.AmTr_v1.0_scaffold00032.249)
- - - - 3.42 - 0.62 - - - - - 0.73 1.12 - - - - - - - 2.56
AMTR_s00032p00231870 (evm_27.TU.AmTr_v1.0_scaffold00032.257)
- - - - 2.44 - -0.68 - 0.28 0.51 - - -1.61 -2.02 -0.34 - - - - -1.14 1.84 2.98
AMTR_s00038p00222270 (evm_27.TU.AmTr_v1.0_scaffold00038.198)
- - - - 2.43 - - - - - - - - - - - - - - 0.61 - 3.92
AMTR_s00038p00224410 (evm_27.TU.AmTr_v1.0_scaffold00038.205)
- - - - 3.3 - - - - - - - - - - - - - - - - 3.6
AMTR_s00038p00233560 (evm_27.TU.AmTr_v1.0_scaffold00038.232)
- - - - 2.16 - - - - -0.2 - - - - - - - - - - - 4.06
AMTR_s00044p00195990 (evm_27.TU.AmTr_v1.0_scaffold00044.211)
- - - - 3.11 - -2.48 - -3.09 -2.45 - - -1.35 - - - - - - - - 3.65
AMTR_s00045p00039850 (evm_27.TU.AmTr_v1.0_scaffold00045.17)
- - - - 3.21 - - - - - - - - - - - - - - - - 3.67
AMTR_s00047p00162780 (evm_27.TU.AmTr_v1.0_scaffold00047.82)
- - - - 3.66 - - - - - - - - - - - - - - - - 3.22
AMTR_s00050p00207830 (evm_27.TU.AmTr_v1.0_scaffold00050.70)
- - - - 3.99 - - - 0.39 - - - - -0.12 1.94 - - - - - - -
AMTR_s00050p00214060 (evm_27.TU.AmTr_v1.0_scaffold00050.77)
- - - - 2.87 - - - - - - - - - - - - - - - - 3.88
AMTR_s00051p00205310 (evm_27.TU.AmTr_v1.0_scaffold00051.87)
- - - - - - - - - 1.83 - - 2.88 - 3.47 - - - - - - -
AMTR_s00051p00226050 (evm_27.TU.AmTr_v1.0_scaffold00051.102)
- - - - 1.97 - - - - - - - - - 2.76 - - - - - - 3.5
AMTR_s00056p00022760 (evm_27.TU.AmTr_v1.0_scaffold00056.8)
- - - - 2.86 - - - - - - - - - - - 1.99 - - - - 3.43
AMTR_s00056p00057850 (evm_27.TU.AmTr_v1.0_scaffold00056.39)
- - - - 2.41 - - - - -2.1 1.96 - -1.85 - - - - - - - - 3.62
AMTR_s00061p00215500 (evm_27.TU.AmTr_v1.0_scaffold00061.274)
- - - - 3.25 - - - - - - - - - - - - - - - - 3.64
AMTR_s00061p00216590 (evm_27.TU.AmTr_v1.0_scaffold00061.280)
- - - - 2.27 - - - - - - - - - - - - - - - - 4.1
AMTR_s00062p00123340 (evm_27.TU.AmTr_v1.0_scaffold00062.101)
- - - - 3.45 - 2.43 - - - - - 1.85 - 1.06 - - - - - - -
AMTR_s00062p00210870 (evm_27.TU.AmTr_v1.0_scaffold00062.232)
- - - - 3.91 - - - - - - - 2.18 - - - - - - - - 1.28
AMTR_s00063p00104730 (evm_27.TU.AmTr_v1.0_scaffold00063.18)
- - - - 3.89 - - - - - - - 2.84 - - - - - - - - -
AMTR_s00064p00087640 (evm_27.TU.AmTr_v1.0_scaffold00064.30)
- - - - 3.66 - - - - - - - - - - - - - - 1.5 - 2.7
AMTR_s00067p00183140 (evm_27.TU.AmTr_v1.0_scaffold00067.195)
- - 1.23 - 2.43 - - 1.46 1.03 -0.86 - - 0.82 - 1.61 - - - - - - 2.04
AMTR_s00069p00188680 (evm_27.TU.AmTr_v1.0_scaffold00069.190)
- - - - - - 1.05 - 1.18 - - - 2.46 - 3.02 - - - - - - 2.02
AMTR_s00073p00155750 (evm_27.TU.AmTr_v1.0_scaffold00073.43)
- - - - 3.66 - 3.23 - - - - - - - - - - - - - - -
AMTR_s00074p00141010 (evm_27.TU.AmTr_v1.0_scaffold00074.53)
- - - - 3.59 - - - - - - - 2.51 - - - - - - - - 2.1
AMTR_s00085p00054900 (evm_27.TU.AmTr_v1.0_scaffold00085.24)
- - - - 0.52 - -0.51 - 1.86 1.39 - - -0.23 -2.0 2.49 - 1.56 - - - - 1.98
AMTR_s00088p00103440 (evm_27.TU.AmTr_v1.0_scaffold00088.67)
- - - 0.75 3.14 - - - -0.81 - - - -0.69 - 0.65 - - - - 1.73 - 2.44
AMTR_s00089p00144070 (evm_27.TU.AmTr_v1.0_scaffold00089.83)
- - - - 3.19 - 1.82 - 1.66 0.14 - - 1.54 0.7 -0.94 - - - - - - -
AMTR_s00093p00092080 (evm_27.TU.AmTr_v1.0_scaffold00093.28)
- - - - 3.03 - -1.42 - -0.17 0.26 0.46 - -1.22 1.93 1.07 - - - - - - 1.86
AMTR_s00093p00092400 (evm_27.TU.AmTr_v1.0_scaffold00093.29)
- - - - 3.54 - - - - - - - 1.18 -0.26 -0.67 - - - - - - 2.72
AMTR_s00102p00046460 (evm_27.TU.AmTr_v1.0_scaffold00102.17)
- - - - 3.43 - - - - - 0.9 1.66 -2.59 -2.15 -0.54 - - - - - - 2.36
AMTR_s00106p00152110 (evm_27.TU.AmTr_v1.0_scaffold00106.126)
2.09 - - - 1.49 - -1.46 - -3.16 -1.22 - - 0.8 -3.22 1.29 0.4 -1.18 - - -3.1 -0.39 2.83
AMTR_s00106p00152160 (evm_27.TU.AmTr_v1.0_scaffold00106.127)
- - - - 1.7 - -1.66 - -3.64 -3.49 -0.41 - 1.37 -1.24 1.25 1.37 -0.79 -0.84 -0.01 -2.39 0.58 2.52
AMTR_s00111p00130900 (evm_27.TU.AmTr_v1.0_scaffold00111.108)
- - - - 3.87 - 2.05 - 1.67 - - - - - - - - - - - - -
AMTR_s00111p00134440 (evm_27.TU.AmTr_v1.0_scaffold00111.111)
- - - - 2.23 - -0.32 - 0.49 -0.3 - - -2.73 -0.48 -0.31 - - - - - - 3.66
AMTR_s00114p00147940 (evm_27.TU.AmTr_v1.0_scaffold00114.67)
- - - - 3.97 - - - - - - - 2.66 - - - - - - - - -
AMTR_s00121p00132150 (evm_27.TU.AmTr_v1.0_scaffold00121.42)
- - - - 3.96 - - - - - - - - - - - - - - - - 2.68
AMTR_s00122p00065540 (evm_27.TU.AmTr_v1.0_scaffold00122.21)
- - - - 2.7 - - - - - - - - - - - - - - - - 3.96
AMTR_s00126p00041860 (evm_27.TU.AmTr_v1.0_scaffold00126.11)
- - - - 4.02 - 2.53 - - - - - - - - - - - - - - -
AMTR_s00129p00068690 (evm_27.TU.AmTr_v1.0_scaffold00129.43)
- - - - 4.01 - - - - - - - 2.16 - - - - - - - - 0.52
AMTR_s00137p00110080 (evm_27.TU.AmTr_v1.0_scaffold00137.55)
- - - - - - - - - - - - - - - - - - - - - 4.46
AMTR_s00141p00102170 (evm_27.TU.AmTr_v1.0_scaffold00141.36)
- - - - 3.69 - - - - - - - - - - - - - - - - 3.18
AMTR_s00154p00038890 (evm_27.TU.AmTr_v1.0_scaffold00154.21)
- - - - 3.98 - 2.62 - - - - - - - - - - - - - - -
AMTR_s00163p00076040 (evm_27.TU.AmTr_v1.0_scaffold00163.30)
- - - - 2.75 - - - - -1.81 - - -0.15 - 1.77 - - - - - - 3.42
AMTR_s00165p00056090 (evm_27.TU.AmTr_v1.0_scaffold00165.35)
- - - - 3.82 - - - -0.47 - - - - - - - - - - - - 2.85
AMTR_s00174p00056430 (evm_27.TU.AmTr_v1.0_scaffold00174.23)
- - - - 3.62 - - - - - - - - - - - - - - - - 3.28
AMTR_s00203p00032500 (evm_27.TU.AmTr_v1.0_scaffold00203.11)
- - - - 3.46 - - - - 1.07 - - -0.62 - - - - - - - - 3.05
AMTR_s00243p00014580 (evm_27.TU.AmTr_v1.0_scaffold00243.3)
- - - - 3.64 - - - - - - - 0.25 - - - - - - - - 3.05
AMTR_s00335p00013700 (evm_27.TU.AmTr_v1.0_scaffold00335.1)
- - - - 4.1 - - - - - - - - - - - - - - - - 2.27
AMTR_s00913p00010900 (evm_27.TU.AmTr_v1.0_scaffold00913.2)
- - - - 2.06 - - - - - - - - - - - - - - - - 4.16
AMTR_s02003p00008260 (evm_27.TU.AmTr_v1.0_scaffold02003.1)
- - - - 3.18 - - - - -26.07 - - - - - - - - - - - 3.7
AMTR_s02838p00004170 (evm_27.TU.AmTr_v1.0_scaffold02838.1)
- - - - 3.21 - - - -0.11 -0.77 - - - - - - - - - - - 3.49
AMTR_s03475p00005140 (evm_27.TU.AmTr_v1.0_scaffold03475.1)
- - - - 2.58 - - - - - - - - 2.44 - - - - - - - 3.4

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.