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Heatmap: Cluster_240 (HCCA)

View as: (view raw or zlog-transformed)

View using InCHLib : here ( Experimental feature, still under development)

(Values are normalized against highest expression of the row)

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Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00001p00232510 (evm_27.TU.AmTr_v1.0_scaffold00001.248)
 0.47 0.04 0.47 0.42 0.36 0.0 0.06 0.01 0.13 0.13 0.61 0.69 0.45 0.45 0.53 0.8 0.72 0.5 0.48 0.32 0.38 1.0
AMTR_s00009p00242790 (evm_27.TU.AmTr_v1.0_scaffold00009.224)
 0.25 0.14 0.15 0.06 0.08 0.0 0.0 0.0 0.0 0.0 1.0 0.8 0.53 0.21 0.33 0.06 0.79 0.8 0.47 0.11 0.16 0.71
AMTR_s00010p00174280 (evm_27.TU.AmTr_v1.0_scaffold00010.140)
 0.03 0.64 0.31 0.1 0.16 0.01 0.02 0.0 0.06 0.04 0.58 0.67 0.49 0.57 0.72 0.45 0.64 0.37 0.32 0.45 0.43 1.0
AMTR_s00016p00092430 (evm_27.TU.AmTr_v1.0_scaffold00016.52)
 0.0 0.0 0.0 0.0 0.04 0.0 0.0 0.0 0.0 0.0 0.19 0.15 0.76 0.49 0.2 0.1 0.15 0.0 0.03 0.08 0.0 1.0
AMTR_s00016p00258200 (evm_27.TU.AmTr_v1.0_scaffold00016.354)
 0.2 0.46 0.19 0.46 0.1 0.02 0.05 0.06 0.09 0.11 0.51 0.76 0.3 0.25 0.15 0.82 0.51 1.0 0.86 0.39 0.25 0.95
AMTR_s00019p00133250 (evm_27.TU.AmTr_v1.0_scaffold00019.114)
 0.3 0.11 0.26 0.0 0.11 0.0 0.0 0.0 0.0 0.0 0.23 0.18 0.38 0.01 0.17 0.01 0.05 0.09 0.01 0.01 0.0 1.0
AMTR_s00020p00046530 (evm_27.TU.AmTr_v1.0_scaffold00020.16)
 0.25 0.34 0.16 0.09 0.08 0.0 0.0 0.0 0.0 0.0 0.89 0.76 0.61 0.24 0.32 0.39 1.0 0.8 0.79 0.33 0.22 0.77
AMTR_s00021p00239830 (evm_27.TU.AmTr_v1.0_scaffold00021.249)
 0.85 0.39 0.18 0.49 0.1 0.0 0.04 0.0 0.11 0.09 0.62 0.54 0.74 0.46 0.31 1.0 0.82 0.42 0.39 0.32 0.4 0.7
AMTR_s00022p00086120 (evm_27.TU.AmTr_v1.0_scaffold00022.66)
 0.32 0.14 0.07 0.26 0.1 0.0 0.01 0.0 0.01 0.01 0.44 0.61 0.3 0.23 0.28 0.23 1.0 0.7 0.8 0.27 0.24 0.66
AMTR_s00022p00097040 (evm_27.TU.AmTr_v1.0_scaffold00022.79)
 0.2 0.31 0.11 0.21 0.33 0.18 0.11 0.06 0.1 0.11 0.55 0.56 0.51 0.2 0.43 0.22 0.9 0.99 0.7 0.33 0.18 1.0
AMTR_s00025p00241980 (evm_27.TU.AmTr_v1.0_scaffold00025.371)
 0.0 0.81 0.34 0.03 0.28 0.0 0.02 0.07 0.04 0.03 0.58 0.59 0.67 0.37 0.59 0.4 0.86 0.68 0.44 0.41 0.35 1.0
AMTR_s00026p00066510 (evm_27.TU.AmTr_v1.0_scaffold00026.22)
 0.0 0.0 0.0 0.03 0.02 0.0 0.01 0.0 0.02 0.01 0.51 0.34 0.14 0.02 0.05 0.03 0.45 0.51 0.61 0.23 0.61 1.0
AMTR_s00028p00116390 (evm_27.TU.AmTr_v1.0_scaffold00028.35)
 0.0 0.15 0.0 0.0 0.19 0.0 0.0 0.0 0.0 0.0 0.47 0.4 0.23 0.05 0.12 0.04 0.04 0.71 0.7 0.13 0.5 1.0
AMTR_s00032p00238080 (evm_27.TU.AmTr_v1.0_scaffold00032.270)
 0.0 0.0 0.02 0.17 0.04 0.0 0.0 0.0 0.0 0.0 0.76 0.59 0.58 0.28 0.12 0.1 1.0 0.69 0.63 0.44 0.32 0.65
AMTR_s00034p00196340 (evm_27.TU.AmTr_v1.0_scaffold00034.71)
 0.0 0.9 0.0 0.0 0.42 0.0 0.27 0.0 0.19 0.22 0.77 0.85 0.48 0.32 0.29 0.42 0.55 0.54 0.36 0.29 0.36 1.0
AMTR_s00039p00100360 (evm_27.TU.AmTr_v1.0_scaffold00039.56)
 0.0 0.0 0.03 0.04 0.03 0.0 0.43 0.02 0.39 0.3 0.18 0.31 0.21 0.2 0.04 0.61 0.67 0.57 1.0 0.29 0.6 0.83
AMTR_s00040p00091880 (evm_27.TU.AmTr_v1.0_scaffold00040.52)
 0.18 0.02 0.41 0.5 0.32 0.0 0.08 0.0 0.26 0.18 0.72 0.79 0.71 0.54 0.46 0.46 1.0 0.67 0.55 0.61 0.41 0.75
AMTR_s00040p00225910 (evm_27.TU.AmTr_v1.0_scaffold00040.266)
 0.0 0.0 0.0 0.05 0.05 0.0 0.02 0.0 0.03 0.01 0.25 0.81 0.09 0.02 0.03 0.27 0.22 0.77 0.72 0.1 0.2 1.0
AMTR_s00045p00169620 (evm_27.TU.AmTr_v1.0_scaffold00045.202)
 0.25 0.0 0.0 0.01 0.2 0.0 0.0 0.0 0.0 0.0 0.19 0.15 0.74 0.21 0.63 0.48 0.3 0.0 0.0 0.22 0.0 1.0
AMTR_s00047p00081310 (evm_27.TU.AmTr_v1.0_scaffold00047.27)
 0.15 0.02 0.21 0.14 0.15 0.07 0.01 0.0 0.02 0.02 1.0 0.65 0.33 0.42 0.12 0.36 0.87 0.48 0.52 0.24 0.26 0.69
AMTR_s00048p00206850 (evm_27.TU.AmTr_v1.0_scaffold00048.179)
 0.3 0.26 0.4 0.01 0.02 0.0 0.0 0.0 0.01 0.01 1.0 0.5 0.28 0.04 0.06 0.07 0.92 0.83 0.59 0.18 0.43 0.66
AMTR_s00058p00210070 (evm_27.TU.AmTr_v1.0_scaffold00058.221)
 0.0 0.0 0.0 0.0 0.13 0.0 0.0 0.0 0.01 0.0 0.51 0.36 0.6 0.23 0.46 0.06 0.28 0.15 0.06 0.24 0.06 1.0
AMTR_s00059p00053950 (evm_27.TU.AmTr_v1.0_scaffold00059.33)
 0.0 0.0 0.0 0.02 0.32 0.0 0.01 0.0 0.02 0.01 0.66 0.68 0.31 0.05 0.17 0.13 0.74 0.72 0.29 0.14 0.96 1.0
AMTR_s00059p00166010 (evm_27.TU.AmTr_v1.0_scaffold00059.156)
 0.01 0.25 0.0 0.07 0.18 0.01 0.06 0.0 0.1 0.07 0.8 0.6 0.49 0.28 0.3 0.33 1.0 0.64 0.5 0.29 0.24 0.96
AMTR_s00059p00218840 (evm_27.TU.AmTr_v1.0_scaffold00059.263)
 0.28 0.19 0.13 0.39 0.34 0.0 0.0 0.0 0.0 0.0 0.67 0.44 0.35 0.28 0.41 1.0 0.64 0.53 0.28 0.34 0.12 0.9
AMTR_s00061p00183870 (evm_27.TU.AmTr_v1.0_scaffold00061.206)
 0.19 0.34 0.53 0.16 0.17 0.0 0.01 0.03 0.03 0.04 0.78 0.73 0.65 0.29 0.55 0.21 1.0 0.78 0.59 0.37 0.32 0.77
0.05 0.17 0.01 0.27 0.33 0.0 0.03 0.0 0.05 0.08 0.33 0.18 0.52 0.19 0.5 0.42 0.21 0.49 0.56 0.43 0.56 1.0
AMTR_s00069p00042170 (evm_27.TU.AmTr_v1.0_scaffold00069.24)
 0.0 0.39 0.0 0.21 0.12 0.0 0.0 0.0 0.01 0.01 0.72 0.91 0.4 0.1 0.29 0.43 1.0 0.41 0.35 0.3 0.28 0.77
AMTR_s00076p00117630 (evm_27.TU.AmTr_v1.0_scaffold00076.37)
 0.0 0.0 0.0 0.0 0.13 0.0 0.02 0.0 0.04 0.03 0.63 0.77 0.3 0.25 0.41 0.19 0.72 0.82 0.57 0.25 0.32 1.0
AMTR_s00076p00118040 (evm_27.TU.AmTr_v1.0_scaffold00076.38)
 0.0 0.0 0.0 0.0 0.21 0.0 0.02 0.0 0.04 0.03 0.63 0.77 0.48 0.27 0.5 0.2 0.5 0.71 0.48 0.25 0.17 1.0
AMTR_s00081p00171100 (evm_27.TU.AmTr_v1.0_scaffold00081.76)
 0.07 0.14 0.07 0.64 0.14 0.0 0.05 0.02 0.08 0.07 0.59 0.52 0.6 0.26 0.44 0.37 1.0 0.66 0.56 0.49 0.35 0.92
AMTR_s00088p00102240 (evm_27.TU.AmTr_v1.0_scaffold00088.65)
 0.15 0.09 0.05 0.04 0.08 0.1 0.04 0.0 0.06 0.06 0.6 0.38 0.78 0.35 0.15 0.24 1.0 0.98 0.93 0.42 0.29 0.85
AMTR_s00088p00177890 (evm_27.TU.AmTr_v1.0_scaffold00088.157)
 0.0 0.0 0.0 0.0 0.06 0.0 0.0 0.0 0.0 0.0 0.43 0.48 0.25 0.04 0.02 0.84 0.08 0.71 0.82 0.14 0.88 1.0
AMTR_s00092p00137320 (evm_27.TU.AmTr_v1.0_scaffold00092.103)
 0.0 0.0 0.0 0.0 0.01 0.0 0.01 0.0 0.02 0.01 0.06 0.07 0.01 0.0 0.01 0.02 0.34 0.63 0.79 0.07 0.41 1.0
AMTR_s00096p00163200 (evm_27.TU.AmTr_v1.0_scaffold00096.108)
 0.0 0.0 0.0 0.0 0.35 0.0 0.0 0.06 0.01 0.02 1.0 0.42 0.16 0.09 0.16 0.09 0.76 0.73 0.67 0.19 0.76 0.72
AMTR_s00103p00124340 (evm_27.TU.AmTr_v1.0_scaffold00103.76)
 0.14 0.15 0.21 0.16 0.09 0.0 0.1 0.01 0.17 0.15 0.46 0.42 0.55 0.28 0.37 0.3 1.0 0.73 0.53 0.36 0.26 0.81
AMTR_s00105p00074810 (evm_27.TU.AmTr_v1.0_scaffold00105.39)
 0.0 0.0 0.32 0.0 0.16 0.0 0.0 0.0 0.0 0.0 0.55 0.64 0.16 0.1 0.04 0.06 0.13 0.36 0.43 0.1 0.01 1.0
AMTR_s00105p00150760 (evm_27.TU.AmTr_v1.0_scaffold00105.76)
 0.0 0.0 0.0 0.0 0.04 0.0 0.0 0.0 0.0 0.01 0.18 0.39 0.08 0.0 0.03 0.0 0.51 0.62 0.37 0.19 0.15 1.0
AMTR_s00106p00058730 (evm_27.TU.AmTr_v1.0_scaffold00106.34)
 0.57 0.75 0.37 0.07 0.6 0.13 0.18 0.04 0.31 0.34 0.91 0.96 0.74 0.96 0.5 0.67 0.73 0.52 0.53 0.49 0.4 1.0
AMTR_s00109p00114170 (evm_27.TU.AmTr_v1.0_scaffold00109.112)
 0.15 0.04 0.16 0.02 0.09 0.0 0.0 0.0 0.0 0.0 0.97 0.65 0.36 0.09 0.12 0.12 1.0 0.64 0.65 0.26 0.39 0.73
AMTR_s00111p00079300 (evm_27.TU.AmTr_v1.0_scaffold00111.51)
 0.0 0.0 0.0 0.08 0.05 0.0 0.0 0.0 0.01 0.01 0.97 0.73 0.39 0.19 0.28 0.21 1.0 0.73 0.63 0.32 0.42 0.89
AMTR_s00111p00085260 (evm_27.TU.AmTr_v1.0_scaffold00111.55)
 0.03 0.28 0.0 0.02 0.03 0.0 0.0 0.0 0.03 0.01 0.96 0.46 0.49 0.25 0.21 0.28 1.0 0.87 0.56 0.29 0.32 0.72
AMTR_s00131p00105060 (evm_27.TU.AmTr_v1.0_scaffold00131.75)
 0.0 0.0 0.0 0.0 0.06 0.0 0.0 0.0 0.0 0.0 0.19 0.05 0.03 0.01 0.01 0.19 0.55 0.45 0.65 0.24 0.04 1.0
AMTR_s00142p00066020 (evm_27.TU.AmTr_v1.0_scaffold00142.36)
 0.4 0.0 0.4 0.49 0.06 0.0 0.0 0.0 0.01 0.01 0.91 0.7 0.47 0.37 0.26 0.35 0.98 0.88 0.68 0.39 0.33 1.0
AMTR_s00146p00067360 (evm_27.TU.AmTr_v1.0_scaffold00146.40)
 0.96 0.37 0.2 0.81 0.45 0.39 0.01 0.0 0.01 0.01 0.78 0.68 0.79 0.47 0.24 1.0 0.75 0.51 0.52 0.57 0.41 0.96
AMTR_s00153p00081120 (evm_27.TU.AmTr_v1.0_scaffold00153.45)
 1.0 0.24 0.0 0.43 0.66 0.53 0.04 0.0 0.06 0.05 0.72 0.8 0.97 0.64 0.35 0.66 0.62 0.38 0.59 0.66 0.56 0.62
AMTR_s00156p00038330 (evm_27.TU.AmTr_v1.0_scaffold00156.14)
 0.0 0.1 0.0 0.0 0.01 0.0 0.0 0.0 0.0 0.0 0.21 0.05 0.63 0.32 0.07 0.28 0.0 0.01 0.0 0.0 0.01 1.0
AMTR_s00177p00059450 (evm_27.TU.AmTr_v1.0_scaffold00177.30)
 0.0 0.0 0.0 0.03 0.18 0.0 0.0 0.0 0.0 0.0 0.51 0.47 0.25 0.01 0.15 0.11 0.4 0.44 0.71 0.16 0.05 1.0
AMTR_s00181p00011680 (evm_27.TU.AmTr_v1.0_scaffold00181.1)
 0.22 0.21 0.0 0.0 0.13 0.0 0.0 0.0 0.0 0.0 0.42 0.36 0.57 0.22 0.1 0.08 0.12 0.1 0.09 0.11 0.19 1.0
AMTR_s00204p00031300 (evm_27.TU.AmTr_v1.0_scaffold00204.10)
 0.0 0.0 0.0 0.0 0.3 0.0 0.01 0.0 0.0 0.02 0.22 0.08 0.24 0.01 0.07 0.28 0.7 0.51 0.93 0.46 0.46 1.0
AMTR_s00263p00014290 (evm_27.TU.AmTr_v1.0_scaffold00263.2)
 0.0 0.0 0.0 0.04 0.01 0.0 0.0 0.01 0.0 0.0 0.08 0.12 0.06 0.0 0.0 0.01 0.41 0.44 0.57 0.04 0.06 1.0

Details

Expression values normalized per gene (using the maximum value, Green cells indicate low expression and red high. (Dark gray cells indicate missing values)