Heatmap: Cluster_51 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00001p00259020 (evm_27.TU.AmTr_v1.0_scaffold00001.363)
0.0 0.0 0.0 0.0 0.03 0.0 0.0 0.0 0.02 0.0 0.38 0.0 0.05 0.02 0.08 0.0 0.15 0.0 0.0 0.04 0.52 0.0
AMTR_s00002p00265660 (evm_27.TU.AmTr_v1.0_scaffold00002.500)
0.0 0.0 0.0 0.0 1.22 0.0 0.0 0.0 0.0 0.0 2.56 0.0 0.47 0.22 1.54 0.0 0.0 0.0 0.0 0.16 0.0 1.21
AMTR_s00006p00180020 (evm_27.TU.AmTr_v1.0_scaffold00006.73)
0.0 0.0 0.0 0.0 0.14 0.0 0.0 0.0 0.0 0.0 0.4 0.0 0.04 0.05 0.09 0.0 0.0 0.0 0.53 0.0 0.0 0.0
0.0 0.0 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.16 0.0 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00010p00211540 (evm_27.TU.AmTr_v1.0_scaffold00010.209)
0.0 0.0 0.0 0.0 0.1 0.0 0.0 0.0 0.0 0.0 1.97 0.0 0.47 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
0.0 0.0 0.0 0.0 0.0 0.0 0.03 0.0 0.0 0.0 0.91 0.0 0.0 0.0 0.0 0.0 2.1 0.0 0.0 0.48 0.0 0.0
AMTR_s00015p00213300 (evm_27.TU.AmTr_v1.0_scaffold00015.63)
0.0 0.0 0.0 0.0 5.11 0.0 0.0 0.0 0.0 0.0 3.24 0.0 1.54 1.11 3.33 0.0 0.0 0.0 0.0 0.24 0.0 0.0
AMTR_s00016p00222200 (evm_27.TU.AmTr_v1.0_scaffold00016.203)
0.0 0.0 0.0 0.0 0.18 0.0 0.0 0.0 0.0 0.0 0.29 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00017p00148040 (evm_27.TU.AmTr_v1.0_scaffold00017.68)
0.0 0.2 0.43 0.0 0.14 0.0 0.0 0.0 0.0 0.0 0.76 0.0 0.25 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00023p00063930 (evm_27.TU.AmTr_v1.0_scaffold00023.28)
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.04 0.0 0.31 0.0 0.0 0.0 0.03 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00025p00193020 (evm_27.TU.AmTr_v1.0_scaffold00025.240)
0.0 0.13 0.0 0.0 0.97 0.0 0.07 0.0 0.13 0.0 0.8 0.0 0.07 0.0 0.3 0.0 0.0 0.0 0.0 0.0 0.0 0.42
AMTR_s00026p00170240 (evm_27.TU.AmTr_v1.0_scaffold00026.83)
0.0 0.0 0.0 0.0 0.43 0.0 0.0 0.0 0.0 0.0 0.85 0.0 0.23 0.0 0.04 0.0 0.74 0.0 0.0 1.03 0.0 0.46
AMTR_s00028p00236680 (evm_27.TU.AmTr_v1.0_scaffold00028.122)
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.97 0.0 0.0 0.29 0.3 0.0 0.0 0.0 0.0 0.0 0.0 0.15
AMTR_s00035p00165890 (evm_27.TU.AmTr_v1.0_scaffold00035.31)
0.0 0.0 0.0 0.0 0.35 0.0 0.0 0.0 0.0 0.0 0.29 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.13 0.0 0.0
AMTR_s00037p00117240 (evm_27.TU.AmTr_v1.0_scaffold00037.47)
0.0 0.0 0.0 0.07 0.05 0.0 0.0 0.0 0.0 0.0 0.38 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.08
AMTR_s00038p00066630 (evm_27.TU.AmTr_v1.0_scaffold00038.26)
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.05 0.0 0.4 0.0 0.05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00039p00222360 (evm_27.TU.AmTr_v1.0_scaffold00039.195)
0.0 0.0 0.0 0.28 0.31 0.0 0.0 0.0 0.02 0.0 0.65 0.74 0.68 0.0 0.02 0.0 1.5 0.0 0.91 1.17 0.0 0.4
AMTR_s00040p00212770 (evm_27.TU.AmTr_v1.0_scaffold00040.227)
0.0 0.0 0.0 0.0 0.99 0.0 1.25 0.0 1.53 0.45 5.15 0.0 3.34 0.36 0.46 0.0 5.67 0.0 0.0 0.29 9.28 0.71
AMTR_s00040p00220800 (evm_27.TU.AmTr_v1.0_scaffold00040.250)
0.0 0.0 0.0 0.0 0.65 0.0 0.32 0.58 0.26 0.22 2.98 5.12 0.09 0.07 0.16 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00046p00217530 (evm_27.TU.AmTr_v1.0_scaffold00046.146)
0.0 0.0 0.0 0.0 0.03 0.0 0.0 0.0 0.0 0.0 0.27 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.18
AMTR_s00046p00217600 (evm_27.TU.AmTr_v1.0_scaffold00046.148)
0.0 0.0 0.0 0.0 0.04 0.0 0.0 0.0 0.0 0.0 0.45 0.0 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.15
AMTR_s00047p00063200 (evm_27.TU.AmTr_v1.0_scaffold00047.13)
0.0 0.0 0.0 0.0 0.07 0.0 0.0 0.0 0.0 0.0 0.14 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00047p00186710 (evm_27.TU.AmTr_v1.0_scaffold00047.115)
0.0 0.0 0.0 0.0 0.03 0.0 0.0 0.0 0.0 0.0 0.04 0.0 0.04 0.02 0.05 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00053p00131840 (evm_27.TU.AmTr_v1.0_scaffold00053.79)
0.0 0.0 0.0 0.0 0.07 0.0 0.0 0.0 0.0 0.0 0.76 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00054p00105760 (evm_27.TU.AmTr_v1.0_scaffold00054.35)
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.53 0.0 0.0 0.0 0.0 0.0 0.46 0.0 0.0 0.0 0.0 0.0
AMTR_s00056p00080310 (evm_27.TU.AmTr_v1.0_scaffold00056.56)
0.0 0.0 0.0 0.0 1.32 0.0 0.06 0.0 0.07 0.15 1.2 0.0 0.25 0.0 0.15 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00059p00014910 (evm_27.TU.AmTr_v1.0_scaffold00059.4)
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.07 0.0 0.04 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00061p00142330 (evm_27.TU.AmTr_v1.0_scaffold00061.122)
0.0 0.0 0.0 0.0 0.05 0.0 0.0 0.0 0.0 0.0 2.43 0.0 0.75 0.0 0.28 0.0 0.0 0.0 0.0 0.0 0.0 1.53
AMTR_s00062p00031130 (evm_27.TU.AmTr_v1.0_scaffold00062.15)
0.0 0.0 0.0 0.0 0.0 0.0 0.45 0.0 0.94 0.86 3.15 10.52 0.88 1.12 1.05 0.0 4.78 0.0 8.23 1.02 0.0 0.39
AMTR_s00062p00066650 (evm_27.TU.AmTr_v1.0_scaffold00062.40)
0.0 0.0 0.0 0.0 0.11 0.0 0.09 0.0 0.11 0.11 2.72 0.0 0.0 0.0 0.72 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00064p00065030 (evm_27.TU.AmTr_v1.0_scaffold00064.20)
0.0 0.0 0.0 0.2 0.33 0.0 0.05 0.0 0.11 0.05 0.76 0.52 0.14 0.25 0.33 0.7 0.0 0.0 0.23 0.12 0.41 0.41
AMTR_s00065p00055590 (evm_27.TU.AmTr_v1.0_scaffold00065.28)
0.0 0.0 0.0 0.29 0.19 0.0 0.02 0.0 0.01 0.03 0.23 0.0 0.07 0.01 0.05 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00065p00136820 (evm_27.TU.AmTr_v1.0_scaffold00065.91)
0.0 0.0 0.0 0.0 0.07 0.0 0.0 0.0 0.04 0.0 0.59 0.0 0.35 0.05 0.2 0.0 0.26 0.0 0.0 0.0 0.0 0.12
AMTR_s00067p00154820 (evm_27.TU.AmTr_v1.0_scaffold00067.150)
0.0 0.0 0.0 0.0 0.4 0.0 0.0 0.0 0.0 0.0 0.39 0.0 0.0 0.03 0.25 0.0 0.52 0.0 0.27 0.32 0.0 0.0
AMTR_s00068p00115260 (evm_27.TU.AmTr_v1.0_scaffold00068.69)
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.04 0.32 0.0 0.11 0.0 0.03 0.0 0.5 0.0 0.0 0.29 0.0 0.0
AMTR_s00075p00191460 (evm_27.TU.AmTr_v1.0_scaffold00075.62)
0.0 0.0 0.0 0.0 0.44 0.0 0.0 0.0 0.02 0.02 0.54 0.0 0.0 0.07 0.51 0.0 0.61 0.0 0.0 0.16 0.0 0.09
AMTR_s00076p00168260 (evm_27.TU.AmTr_v1.0_scaffold00076.63)
0.0 0.0 0.0 0.0 0.41 0.0 0.0 0.0 0.0 0.0 1.6 2.04 0.15 0.07 0.07 0.0 0.63 0.0 1.86 0.73 0.0 0.51
3.23 0.26 0.57 0.43 4.37 4.18 0.13 2.54 0.16 0.31 5.36 0.55 3.88 9.22 7.85 0.0 0.81 0.24 0.11 0.13 0.86 0.23
AMTR_s00079p00035970 (evm_27.TU.AmTr_v1.0_scaffold00079.10)
0.0 0.0 0.0 0.0 0.24 0.0 0.0 0.0 0.0 0.0 0.92 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.63 0.0 0.0 0.33
AMTR_s00082p00133770 (evm_27.TU.AmTr_v1.0_scaffold00082.31)
0.0 0.0 0.0 0.0 0.2 0.0 0.0 0.0 0.01 0.0 0.1 0.0 0.01 0.02 0.26 0.0 0.08 0.0 0.0 0.25 0.28 0.05
AMTR_s00089p00027750 (evm_27.TU.AmTr_v1.0_scaffold00089.7)
0.0 0.0 0.0 0.0 0.2 0.0 0.0 0.0 0.03 0.03 0.24 0.0 0.03 0.04 0.11 0.56 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00095p00089560 (evm_27.TU.AmTr_v1.0_scaffold00095.51)
0.0 0.0 0.0 0.0 20.59 0.0 0.21 0.0 0.0 0.0 27.65 0.0 0.56 0.07 4.02 0.0 52.93 32.52 50.92 2.47 0.0 1.25
AMTR_s00097p00162320 (evm_27.TU.AmTr_v1.0_scaffold00097.52)
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.61 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.82 0.0 0.0 0.09
AMTR_s00101p00085590 (evm_27.TU.AmTr_v1.0_scaffold00101.61)
0.0 0.0 0.0 0.14 0.92 0.0 0.04 0.0 0.02 0.14 0.6 0.0 0.56 0.33 0.46 0.0 0.24 0.91 0.0 0.57 0.82 0.38
AMTR_s00102p00093300 (evm_27.TU.AmTr_v1.0_scaffold00102.49)
0.0 0.0 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.04 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00105p00034430 (evm_27.TU.AmTr_v1.0_scaffold00105.13)
0.0 0.0 0.0 0.0 0.69 0.0 0.0 0.0 0.0 0.0 2.72 0.0 0.0 0.1 0.15 0.0 2.37 0.0 0.0 0.0 0.0 0.35
AMTR_s00106p00060340 (evm_27.TU.AmTr_v1.0_scaffold00106.34)
0.0 0.0 0.0 0.04 0.26 0.0 0.07 0.34 0.02 0.03 0.59 0.0 0.25 0.03 0.52 0.0 0.0 0.0 0.52 0.04 0.0 0.0
AMTR_s00112p00122140 (evm_27.TU.AmTr_v1.0_scaffold00112.31)
0.0 0.0 0.0 8.87 35.24 0.0 3.73 0.0 10.48 12.62 12.77 0.0 14.86 26.41 29.01 0.0 4.05 0.0 0.0 17.45 2.17 3.03
AMTR_s00119p00091610 (evm_27.TU.AmTr_v1.0_scaffold00119.69)
0.0 0.4 0.0 0.12 0.28 0.0 0.0 0.0 0.0 0.0 0.17 0.0 0.14 0.03 0.17 0.0 0.15 0.0 0.0 0.14 0.46 0.04
AMTR_s00141p00014410 (evm_27.TU.AmTr_v1.0_scaffold00141.2)
0.0 0.0 0.0 0.0 0.22 0.0 0.0 0.0 0.06 0.04 0.31 0.0 0.0 0.0 0.18 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00141p00067960 (evm_27.TU.AmTr_v1.0_scaffold00141.20)
0.0 0.0 0.0 0.0 0.22 0.0 0.0 0.0 0.0 0.0 0.31 0.0 0.0 0.07 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00145p00058920 (evm_27.TU.AmTr_v1.0_scaffold00145.17)
0.0 0.0 0.0 0.0 0.72 0.0 0.0 0.0 0.03 0.19 1.37 0.0 0.0 0.07 0.43 0.0 0.27 0.0 1.46 0.3 0.0 0.07
AMTR_s00146p00083410 (evm_27.TU.AmTr_v1.0_scaffold00146.50)
0.0 0.0 0.0 0.05 0.01 0.0 0.02 0.0 0.0 0.02 0.21 0.0 0.15 0.03 0.14 0.0 0.17 0.31 0.0 0.05 0.0 0.0
AMTR_s00161p00071160 (evm_27.TU.AmTr_v1.0_scaffold00161.27)
0.0 0.0 0.0 0.11 0.08 0.0 0.0 0.0 0.04 0.0 1.04 0.0 0.06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00180p00028060 (evm_27.TU.AmTr_v1.0_scaffold00180.14)
0.0 0.0 0.0 0.0 0.05 0.0 0.0 0.0 0.03 0.04 0.58 0.0 0.0 0.0 0.08 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00180p00039050 (evm_27.TU.AmTr_v1.0_scaffold00180.20)
0.0 0.0 0.0 0.0 0.43 0.0 0.0 0.0 0.02 0.0 0.17 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s04152p00004330 (evm_27.TU.AmTr_v1.0_scaffold04152.1)
0.0 0.0 0.0 0.0 2.49 0.0 0.49 0.0 0.51 1.08 5.07 0.0 9.31 4.54 5.59 0.0 0.0 0.0 6.63 5.07 0.0 4.28
AMTR_s04199p00003110 (evm_27.TU.AmTr_v1.0_scaffold04199.1)
0.0 0.0 0.0 1.84 2.08 0.0 0.33 0.0 0.29 0.16 1.28 0.0 0.29 0.0 0.38 0.0 2.34 0.0 0.56 0.95 1.6 0.64

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)