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Heatmap: Cluster_32 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00003p00267620 (evm_27.TU.AmTr_v1.0_scaffold00003.390)
 - - - - 4.46 - - - - - - - - - - - - - - - - -
AMTR_s00004p00219880 (evm_27.TU.AmTr_v1.0_scaffold00004.215)
 - - - - 4.46 - - - - - - - - - - - - - - - - -
AMTR_s00004p00268930 (evm_27.TU.AmTr_v1.0_scaffold00004.272)
 - - - - 4.46 - - - - - - - - - - - - - - - - -
AMTR_s00005p00223390 (evm_27.TU.AmTr_v1.0_scaffold00005.98)
 - - - - 4.46 - - - - - - - - - - - - - - - - -
AMTR_s00005p00239690 (evm_27.TU.AmTr_v1.0_scaffold00005.127)
 - - - - 4.46 - - - - - - - - - - - - - - - - -
AMTR_s00006p00264490 (evm_27.TU.AmTr_v1.0_scaffold00006.265)
 - - - - 4.25 - - - - 1.54 - - - - - - - - - - - -
AMTR_s00010p00265160 (evm_27.TU.AmTr_v1.0_scaffold00010.507)
 - - - - 4.46 - - - - - - - - - - - - - - - - -
AMTR_s00013p00253120 (evm_27.TU.AmTr_v1.0_scaffold00013.235)
 - - - 0.74 4.29 - -1.44 - - -2.91 - - - - - - - - - - - -1.72
AMTR_s00016p00165350 (evm_27.TU.AmTr_v1.0_scaffold00016.122)
 - - - - 4.46 - - - - - - - - - - - - - - - - -
AMTR_s00018p00097560 (evm_27.TU.AmTr_v1.0_scaffold00018.46)
 - - - - 4.46 - - - - - - - - - - - - - - - - -
AMTR_s00019p00033860 (evm_27.TU.AmTr_v1.0_scaffold00019.11)
 - - - 1.15 3.96 - - - - -1.23 - - 0.3 -1.1 1.08 - - - - - - -
AMTR_s00021p00171070 (evm_27.TU.AmTr_v1.0_scaffold00021.123)
 - - - - 4.46 - - - - - - - - - - - - - - - - -
AMTR_s00024p00062570 (evm_27.TU.AmTr_v1.0_scaffold00024.24)
 - - - - 4.25 - - - - - - - - - 1.54 - - - - - - -
AMTR_s00025p00248280 (evm_27.TU.AmTr_v1.0_scaffold00025.403)
 - - - - 4.24 - 0.71 - 0.54 - - - - - - - - - - - - -
AMTR_s00026p00072130 (evm_27.TU.AmTr_v1.0_scaffold00026.28)
 - - - - 4.27 - - - - -2.74 - - - - - - - - - - 1.36 -
AMTR_s00027p00073850 (evm_27.TU.AmTr_v1.0_scaffold00027.18)
 - - - - 4.46 - - - - - - - - - - - - - - - - -
AMTR_s00027p00075110 (evm_27.TU.AmTr_v1.0_scaffold00027.21)
 - - - - 4.46 - - - - - - - - - - - - - - - - -
AMTR_s00028p00094340 (evm_27.TU.AmTr_v1.0_scaffold00028.27)
 - - - - 4.46 - - - - - - - - - - - - - - - - -
AMTR_s00030p00022030 (evm_27.TU.AmTr_v1.0_scaffold00030.4)
 - - - -3.74 4.18 - - - - - -3.63 -0.84 -3.47 -3.92 0.96 -2.41 - - - -4.34 -0.61 -2.18
AMTR_s00030p00194140 (evm_27.TU.AmTr_v1.0_scaffold00030.126)
 - - - - 4.28 - - - - - - - 1.39 - - - - - - - - -
AMTR_s00032p00052640 (evm_27.TU.AmTr_v1.0_scaffold00032.32)
 - - - - 4.06 - - - - - - - - 1.28 1.51 - - - - - - -
AMTR_s00034p00150800 (evm_27.TU.AmTr_v1.0_scaffold00034.45)
 - - - - 4.05 - - - - - - - - -0.52 1.69 - - - - - - 0.57
AMTR_s00035p00172730 (evm_27.TU.AmTr_v1.0_scaffold00035.36)
 - - - - 4.46 - - - - - - - - - - - - - - - - -
AMTR_s00036p00236490 (evm_27.TU.AmTr_v1.0_scaffold00036.182)
 - - - - 4.36 - - - - - - - - - 0.6 - - - - - - -
AMTR_s00039p00163920 (evm_27.TU.AmTr_v1.0_scaffold00039.120)
 - - - - 4.46 - - - - - - - - - - - - - - - - -
AMTR_s00041p00235470 (evm_27.TU.AmTr_v1.0_scaffold00041.289)
 - - - - 4.46 - - - - - - - - - - - - - - - - -
AMTR_s00043p00224600 (evm_27.TU.AmTr_v1.0_scaffold00043.84)
 - - - - 4.46 - - - - - - - - - - - - - - - - -
AMTR_s00046p00065980 (evm_27.TU.AmTr_v1.0_scaffold00046.25)
 - - - - 4.28 - 0.39 - 0.31 - - - - - - - - - - - - -
AMTR_s00046p00083630 (evm_27.TU.AmTr_v1.0_scaffold00046.38)
 - - - - 4.46 - - - - - - - - - - - - - - - - -
AMTR_s00047p00166310 (evm_27.TU.AmTr_v1.0_scaffold00047.83)
 - - - - 4.28 - - - -0.75 - - - - - 1.0 - - - - - - -
AMTR_s00051p00082110 (evm_27.TU.AmTr_v1.0_scaffold00051.30)
 - - - - 4.32 - - - - - - - - - 1.05 - - - - - - -
AMTR_s00053p00073700 (evm_27.TU.AmTr_v1.0_scaffold00053.38)
 - - - - 4.46 - - - - - - - - - - - - - - - - -
AMTR_s00054p00170120 (evm_27.TU.AmTr_v1.0_scaffold00054.62)
 2.42 - - - 4.06 - - - - - - - - - - - - - - - - -
AMTR_s00055p00193740 (evm_27.TU.AmTr_v1.0_scaffold00055.129)
 - - - - 4.28 - -1.12 - -0.88 - - - - -1.27 -1.47 - - - - -0.44 - -
AMTR_s00056p00055320 (evm_27.TU.AmTr_v1.0_scaffold00056.35)
 - - - - 4.46 - - - - - - - - - - - - - - - - -
AMTR_s00058p00073870 (evm_27.TU.AmTr_v1.0_scaffold00058.33)
 - - - - 4.09 - - - - - - - - -2.55 2.28 - - - - - - -
AMTR_s00060p00116030 (evm_27.TU.AmTr_v1.0_scaffold00060.54)
 - - - - 4.31 - - - - - - - - - 1.09 - - - - - - -
AMTR_s00068p00096670 (evm_27.TU.AmTr_v1.0_scaffold00068.47)
 - - - - 4.46 - - - - - - - - - - - - - - - - -
AMTR_s00069p00178340 (evm_27.TU.AmTr_v1.0_scaffold00069.161)
 - - - - 4.46 - - - - - - - - - - - - - - - - -
AMTR_s00073p00188940 (evm_27.TU.AmTr_v1.0_scaffold00073.60)
 - - - - 4.46 - - - - - - - - - - - - - - - - -
AMTR_s00081p00142770 (evm_27.TU.AmTr_v1.0_scaffold00081.54)
 - - - - 4.46 - - - - - - - - - - - - - - - - -
AMTR_s00086p00037930 (evm_27.TU.AmTr_v1.0_scaffold00086.16)
 - - - - 4.13 - - - - - - - 0.85 - - - - - - - - 1.4
AMTR_s00086p00138590 (evm_27.TU.AmTr_v1.0_scaffold00086.78)
 - - - - 4.46 - - - - - - - - - - - - - - - - -
AMTR_s00087p00043070 (evm_27.TU.AmTr_v1.0_scaffold00087.8)
 - - - - 4.46 - - - - - - - - - - - - - - - - -
AMTR_s00096p00101550 (evm_27.TU.AmTr_v1.0_scaffold00096.57)
 - - - 0.45 3.91 - - - - -2.3 - - -1.55 - 0.18 - - 1.82 - -1.39 - -
AMTR_s00100p00126510 (evm_27.TU.AmTr_v1.0_scaffold00100.42)
 - - - - 4.18 - - - 0.35 - - - - - 1.38 - - - - - - -
AMTR_s00104p00152070 (evm_27.TU.AmTr_v1.0_scaffold00104.78)
 - - - - 4.46 - - - - - - - - - - - - - - - - -
AMTR_s00105p00032000 (evm_27.TU.AmTr_v1.0_scaffold00105.10)
 - - - - 4.46 - - - - - - - - - - - - - - - - -
AMTR_s00108p00028700 (evm_27.TU.AmTr_v1.0_scaffold00108.4)
 - - - - 4.46 - - - - - - - - - - - - - - - - -
AMTR_s00109p00081690 (evm_27.TU.AmTr_v1.0_scaffold00109.65)
 - - - - 4.46 - - - - - - - - - - - - - - - - -
AMTR_s00109p00088630 (evm_27.TU.AmTr_v1.0_scaffold00109.72)
 - - - - 4.34 - -1.49 - - - - - -1.04 -1.41 -0.84 - - - - - - -
AMTR_s00125p00035330 (evm_27.TU.AmTr_v1.0_scaffold00125.8)
 - - - - 4.46 - - - - - - - - - - - - - - - - -
AMTR_s00151p00089350 (evm_27.TU.AmTr_v1.0_scaffold00151.23)
 - - - - 4.22 - - - - - - - - - 1.78 - - - - - - -
AMTR_s00164p00038360 (evm_27.TU.AmTr_v1.0_scaffold00164.14)
 - - - - 4.24 - - - - - - - - 0.7 - - - - - - - 0.61
AMTR_s00235p00020840 (evm_27.TU.AmTr_v1.0_scaffold00235.5)
 - - - - 4.46 - - - - - - - - - - - - - - - - -
AMTR_s00414p00013090 (evm_27.TU.AmTr_v1.0_scaffold00414.1)
 - - - 1.45 4.27 - - - - - - - - - - - - - - - - -
AMTR_s01929p00010140 (evm_27.TU.AmTr_v1.0_scaffold01929.1)
 - - - - 4.46 - - - - - - - - - - - - - - - - -
AMTR_s02611p00010010 (evm_27.TU.AmTr_v1.0_scaffold02611.4)
 - - - - 4.15 - - - - - - - - - 2.11 - - - - - - -
AMTR_s03948p00007490 (evm_27.TU.AmTr_v1.0_scaffold03948.1)
 - - - - 4.46 - - - - - - - - - - - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.