Heatmap: Cluster_10 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00002p00188140 (evm_27.TU.AmTr_v1.0_scaffold00002.165)
-0.3 -0.58 -1.18 -0.05 -1.44 -3.72 -7.83 - -6.31 -5.4 -0.04 0.85 0.05 -3.36 0.3 -5.3 1.09 0.88 1.36 2.25 -1.5 0.86
AMTR_s00003p00271170 (evm_27.TU.AmTr_v1.0_scaffold00003.450)
- - - -6.62 1.4 - - - - - 0.28 - 0.29 2.19 0.55 2.05 - - 1.53 1.94 - -5.28
AMTR_s00004p00228090 (evm_27.TU.AmTr_v1.0_scaffold00004.221)
- - - - 2.52 - - - - - - 0.9 -1.09 1.52 1.99 - -0.24 - -0.45 2.36 - -1.44
AMTR_s00004p00230250 (evm_27.TU.AmTr_v1.0_scaffold00004.222)
-0.46 - - - 2.28 - -3.77 -1.14 -1.92 -2.17 -0.01 1.8 -2.73 0.73 1.76 - -1.18 0.61 -0.55 1.48 - -1.9
AMTR_s00004p00268780 (evm_27.TU.AmTr_v1.0_scaffold00004.271)
- - 1.73 -4.63 1.74 - -5.53 - - -4.81 -0.15 1.29 -1.32 1.42 0.99 - 1.44 0.1 -2.06 1.14 -1.05 -2.95
- - - - 2.48 - - - - - - 1.04 -1.5 1.14 1.63 - -0.95 - 0.78 2.68 - -3.72
AMTR_s00007p00256930 (evm_27.TU.AmTr_v1.0_scaffold00007.304)
-0.82 - - -0.69 -3.36 - - - - - -0.04 1.7 0.7 -0.71 -1.17 1.14 - 1.51 1.35 1.69 1.35 -1.22
AMTR_s00008p00232370 (evm_27.TU.AmTr_v1.0_scaffold00008.155)
- - - - 1.66 - -1.41 - -1.53 -2.52 - 0.52 - -3.39 1.32 - 1.62 2.33 0.93 1.43 0.17 -3.48
AMTR_s00010p00265940 (evm_27.TU.AmTr_v1.0_scaffold00010.516)
- - - - -0.31 - - - - - - 1.24 -1.44 -3.73 1.84 - 1.61 1.63 1.91 2.25 - -2.6
AMTR_s00011p00264480 (evm_27.TU.AmTr_v1.0_scaffold00011.209)
- - - -4.05 -1.08 - -5.22 - -5.18 - 2.39 1.95 0.73 -4.3 -1.92 0.37 1.6 1.74 -0.82 -1.73 0.0 -0.37
AMTR_s00014p00104370 (evm_27.TU.AmTr_v1.0_scaffold00014.36)
0.59 - - -3.62 1.03 - - - - - 0.69 1.41 -1.19 -0.48 0.32 - 0.39 1.39 1.41 2.31 - -2.53
AMTR_s00018p00249030 (evm_27.TU.AmTr_v1.0_scaffold00018.158)
- 2.29 - - -0.69 - - - - -4.57 -0.29 - -1.27 -3.12 0.56 - 2.1 - - 3.19 - -2.18
AMTR_s00018p00256290 (evm_27.TU.AmTr_v1.0_scaffold00018.173)
- -0.59 0.38 -2.48 -1.71 - - - -5.75 -5.59 0.26 -0.55 -0.24 -1.6 -1.13 - 1.5 1.26 0.09 2.88 1.1 -2.04
AMTR_s00019p00037770 (evm_27.TU.AmTr_v1.0_scaffold00019.16)
-0.93 1.03 0.07 -10.03 0.94 -6.89 -1.65 -3.06 -2.83 -2.28 0.86 1.19 0.03 -0.51 -0.01 0.17 0.63 0.77 0.73 0.4 -1.25 0.13
AMTR_s00019p00255280 (evm_27.TU.AmTr_v1.0_scaffold00019.440)
- - - - 0.91 - -2.46 - 1.39 0.13 -0.28 -0.26 -3.18 -4.27 0.99 - 1.37 1.87 0.71 -1.51 1.86 -0.85
AMTR_s00021p00102690 (evm_27.TU.AmTr_v1.0_scaffold00021.49)
- - - - 0.22 - -3.36 - -0.46 -0.97 0.63 1.41 0.41 -1.02 0.44 0.84 2.08 - 0.05 2.09 - -0.31
AMTR_s00025p00066580 (evm_27.TU.AmTr_v1.0_scaffold00025.44)
- - - - 2.1 - - - - - -0.16 - -0.73 2.55 0.82 - - 1.39 - 2.38 - -0.36
AMTR_s00025p00066690 (evm_27.TU.AmTr_v1.0_scaffold00025.45)
- - - 1.61 -0.23 - -5.21 - -2.65 -2.98 -1.01 -1.2 -1.15 2.18 0.33 -2.76 -3.34 - -1.78 2.55 1.7 -0.03
AMTR_s00025p00133030 (evm_27.TU.AmTr_v1.0_scaffold00025.135)
- - - - 3.22 - 1.61 - - - - - - - 3.27 - - - - - - -
AMTR_s00025p00239420 (evm_27.TU.AmTr_v1.0_scaffold00025.362)
-3.32 -7.85 -3.52 -5.04 -4.8 -6.01 -4.93 -8.37 -4.39 -4.46 -1.7 -2.28 -0.61 -2.29 -1.08 -1.14 2.72 1.05 -0.55 2.87 1.4 -4.62
AMTR_s00026p00160050 (evm_27.TU.AmTr_v1.0_scaffold00026.78)
- - 3.39 -5.46 -1.61 -0.59 - - -3.57 -2.17 1.31 1.19 -0.47 -0.88 -0.53 -0.6 -0.02 - -2.79 0.21 - -0.88
AMTR_s00027p00066710 (evm_27.TU.AmTr_v1.0_scaffold00027.15)
- - - - -3.75 - - - -7.51 -8.13 1.32 1.1 -1.67 -6.71 -1.67 - 2.62 0.81 2.01 2.02 -0.7 -6.49
AMTR_s00028p00148940 (evm_27.TU.AmTr_v1.0_scaffold00028.53)
- - - - -2.45 - - - - - 1.32 3.2 -0.63 -2.41 - - - - - 3.22 - -
AMTR_s00028p00219740 (evm_27.TU.AmTr_v1.0_scaffold00028.105)
- - - -2.6 -3.21 - -1.29 - -1.44 -2.15 0.65 0.49 0.15 -2.19 -1.69 -2.4 1.72 1.3 1.58 2.78 -2.18 -3.05
AMTR_s00029p00055730 (evm_27.TU.AmTr_v1.0_scaffold00029.47)
- - - -3.47 0.93 - -4.3 - -5.17 - 0.97 - 1.07 -1.87 1.21 1.0 0.07 2.18 0.92 0.65 -0.78 0.72
AMTR_s00029p00174390 (evm_27.TU.AmTr_v1.0_scaffold00029.233)
- 0.76 - - -1.43 2.9 - - - - - 2.87 -1.46 1.43 1.06 - - - - - - -
AMTR_s00029p00205400 (evm_27.TU.AmTr_v1.0_scaffold00029.295)
-3.79 - - -0.28 -2.72 - - - -5.55 -4.56 0.74 1.21 1.1 -1.38 0.55 -0.35 0.9 0.34 0.69 0.74 0.67 2.04
AMTR_s00030p00195240 (evm_27.TU.AmTr_v1.0_scaffold00030.127)
1.02 1.02 1.1 -0.08 0.36 -3.21 -5.48 -3.29 -4.61 -4.22 0.65 0.6 0.14 0.42 -0.59 -0.86 -0.86 0.48 1.09 0.44 -2.5 -0.18
AMTR_s00031p00137300 (evm_27.TU.AmTr_v1.0_scaffold00031.58)
- - - - 1.18 - - - - - -1.3 1.25 0.27 1.03 -1.07 1.17 1.25 - -0.03 2.54 -0.42 0.09
AMTR_s00031p00139620 (evm_27.TU.AmTr_v1.0_scaffold00031.60)
- - - - 2.89 - - - - - - - - 2.61 2.7 - - - - 1.0 - -
AMTR_s00033p00238160 (evm_27.TU.AmTr_v1.0_scaffold00033.248)
- - - - 2.09 - -1.49 - -1.75 -2.84 0.2 - 0.51 -0.12 2.04 1.42 - 1.79 - 0.52 - 0.81
AMTR_s00034p00068960 (evm_27.TU.AmTr_v1.0_scaffold00034.16)
-0.38 - - -1.55 1.6 - -6.03 - -3.97 -2.43 0.2 0.71 -1.36 0.59 1.91 0.41 -0.88 0.19 0.26 1.52 - 1.06
AMTR_s00038p00115130 (evm_27.TU.AmTr_v1.0_scaffold00038.58)
- - - - - - - - - - 1.87 - 0.18 -1.29 - 2.04 2.16 - 1.25 -1.33 - 2.44
AMTR_s00039p00070110 (evm_27.TU.AmTr_v1.0_scaffold00039.31)
0.41 -2.39 -3.06 0.29 -3.44 -2.73 -3.27 -3.3 -2.56 -2.52 0.46 0.19 0.75 -0.6 -1.04 -6.57 1.96 1.31 -1.52 1.46 0.83 0.81
AMTR_s00042p00092650 (evm_27.TU.AmTr_v1.0_scaffold00042.21)
- - - - 0.58 0.95 - - -4.61 - 0.04 0.24 -0.29 -0.54 0.3 - -0.26 0.04 1.47 2.73 - 1.21
AMTR_s00046p00183500 (evm_27.TU.AmTr_v1.0_scaffold00046.106)
- - - - 2.46 - - - - - - - - - - 3.39 - - 2.6 - - -
AMTR_s00046p00217550 (evm_27.TU.AmTr_v1.0_scaffold00046.147)
- - - - 2.2 - - - - - - - - - 1.31 - - - - - - 3.9
AMTR_s00053p00184360 (evm_27.TU.AmTr_v1.0_scaffold00053.131)
- - - - -2.34 - - - - - 1.62 1.4 1.16 0.98 2.07 - 0.93 1.21 - 1.8 - -
AMTR_s00055p00066540 (evm_27.TU.AmTr_v1.0_scaffold00055.24)
- - - - - - - - - - - - - - - - - - - 4.46 - -
AMTR_s00062p00173640 (evm_27.TU.AmTr_v1.0_scaffold00062.166)
- - - - -4.88 - -4.61 - -4.81 - - 1.08 -2.81 -5.16 - -0.48 2.2 0.89 -1.27 2.79 1.73 0.82
AMTR_s00066p00179760 (evm_27.TU.AmTr_v1.0_scaffold00066.221)
-1.14 -3.52 - -2.2 -7.98 - -9.23 -9.01 - -10.21 -0.71 -0.29 0.96 -1.73 -3.78 1.34 1.34 2.1 -0.07 1.86 1.81 -4.93
AMTR_s00067p00160200 (evm_27.TU.AmTr_v1.0_scaffold00067.160)
- - - -7.95 -6.91 - - - - - 1.32 1.33 -2.37 -5.21 -2.92 - 0.24 3.77 0.84 - - -
AMTR_s00067p00178320 (evm_27.TU.AmTr_v1.0_scaffold00067.183)
-1.99 -0.83 -2.79 1.07 -3.53 1.17 -6.63 0.69 -6.02 - -0.59 -0.12 0.19 -0.89 -2.28 1.63 0.44 0.68 0.24 -0.4 1.46 -0.43
AMTR_s00080p00151530 (evm_27.TU.AmTr_v1.0_scaffold00080.67)
- - - - -0.05 - -2.35 - -3.97 -2.0 - 1.22 -3.03 -0.24 -1.49 - 1.96 - 1.6 2.86 0.87 -0.23
- 1.59 - - 0.71 - -3.33 - -4.86 -2.72 0.25 1.0 -1.32 -2.51 0.58 - 1.86 - -0.36 2.83 - -1.88
AMTR_s00082p00119610 (evm_27.TU.AmTr_v1.0_scaffold00082.24)
- - - - 1.96 - - - - - - - -1.01 -1.7 1.73 - 0.71 1.66 0.5 2.28 1.5 -3.4
AMTR_s00093p00108820 (evm_27.TU.AmTr_v1.0_scaffold00093.38)
- - - - - - -5.23 - - - - - -5.2 - -2.47 - 0.58 0.72 1.58 3.54 1.98 -4.68
AMTR_s00094p00145370 (evm_27.TU.AmTr_v1.0_scaffold00094.20)
- - - - 0.78 - -2.68 1.73 - - - 1.7 - -2.86 0.84 - -0.28 - 0.35 3.25 - -
AMTR_s00096p00055130 (evm_27.TU.AmTr_v1.0_scaffold00096.24)
2.06 2.46 2.15 -2.7 -2.1 - - - - -5.41 -1.46 - -0.89 -2.06 -1.02 - -0.66 - -1.99 0.23 1.78 -1.42
AMTR_s00099p00156210 (evm_27.TU.AmTr_v1.0_scaffold00099.152)
- - - - 0.43 - - - -1.19 -1.75 -0.75 1.07 -0.18 -0.37 0.82 - 1.11 1.88 -1.1 2.1 1.31 -0.47
AMTR_s00110p00015050 (evm_27.TU.AmTr_v1.0_scaffold00110.1)
-3.86 -3.97 -4.65 -4.1 -3.54 -9.23 -9.07 -9.34 -10.79 -11.35 1.76 0.11 0.41 -0.97 1.21 -5.66 0.62 2.13 -0.28 1.43 -3.33 1.82
AMTR_s00110p00030150 (evm_27.TU.AmTr_v1.0_scaffold00110.8)
- - - - -4.04 - -8.89 - -9.45 - -3.59 -3.43 -0.23 -6.49 -2.17 -3.99 2.27 1.69 1.31 3.3 -2.77 -3.73
AMTR_s00117p00108650 (evm_27.TU.AmTr_v1.0_scaffold00117.44)
- - - - 2.09 - - - -1.53 - - - 0.73 0.06 1.74 - 1.41 - - 3.12 - -
AMTR_s00120p00041930 (evm_27.TU.AmTr_v1.0_scaffold00120.11)
- - - - 0.58 - - - - - 3.16 - 1.3 - -0.05 - - - - 3.03 - -
AMTR_s00120p00064670 (evm_27.TU.AmTr_v1.0_scaffold00120.29)
- - - - 2.18 - - - - - - - - -0.8 2.35 3.56 - - - - - -
AMTR_s00122p00139890 (evm_27.TU.AmTr_v1.0_scaffold00122.76)
-4.83 -3.79 - - -4.08 - - - - -9.15 0.05 -0.27 -0.6 -4.43 -4.2 -0.83 1.75 2.64 1.42 1.93 1.33 -4.63
AMTR_s00125p00017400 (evm_27.TU.AmTr_v1.0_scaffold00125.2)
- - - - 1.5 - - - - - - - 0.36 - 1.17 - 2.15 - - 3.49 - -
AMTR_s00128p00079640 (evm_27.TU.AmTr_v1.0_scaffold00128.18)
- - - - -6.19 - -6.0 - -7.64 -7.78 -0.17 -0.47 -0.55 -3.18 -3.09 -1.43 2.78 0.59 -1.86 2.76 1.25 0.34
AMTR_s00128p00100390 (evm_27.TU.AmTr_v1.0_scaffold00128.28)
-0.02 - - - 1.54 - - - - - 1.98 - -1.54 - 0.48 - 1.62 - - 3.15 - -1.0
AMTR_s00136p00102030 (evm_27.TU.AmTr_v1.0_scaffold00136.56)
- 2.88 -2.26 0.34 1.53 - -3.29 - - - - - 0.69 -0.34 -0.02 - - - - 1.2 - 2.17
AMTR_s00141p00048840 (evm_27.TU.AmTr_v1.0_scaffold00141.10)
- - - - -0.25 - - - -5.14 - -0.59 0.59 -0.06 -3.42 -1.36 - 0.12 2.21 0.95 2.88 0.24 0.42
AMTR_s00151p00022910 (evm_27.TU.AmTr_v1.0_scaffold00151.1)
- - 0.98 - 1.5 - - - -3.12 -4.8 - 2.79 -1.46 1.46 -0.39 - -0.35 - -0.97 2.31 - -
AMTR_s00151p00059160 (evm_27.TU.AmTr_v1.0_scaffold00151.9)
- - - - 2.16 - -2.9 - -4.42 -4.26 -0.03 2.75 -2.48 2.53 0.91 - -1.38 - - 0.43 - -
AMTR_s00158p00040970 (evm_27.TU.AmTr_v1.0_scaffold00158.3)
- - - - 2.27 - -3.78 - -1.47 -1.63 -0.14 - 0.07 1.21 2.14 - -0.19 - -0.63 2.57 - -1.75
AMTR_s00158p00073670 (evm_27.TU.AmTr_v1.0_scaffold00158.14)
- - - - - - - - - - - - -0.69 - 0.21 - 1.37 3.32 2.15 1.69 - -
AMTR_s00167p00041230 (evm_27.TU.AmTr_v1.0_scaffold00167.16)
- - - - -1.02 - -4.68 - -5.44 -2.52 -0.47 -0.26 0.84 -0.41 -0.16 -0.82 1.62 1.14 0.39 2.76 - 1.24
AMTR_s00167p00047730 (evm_27.TU.AmTr_v1.0_scaffold00167.21)
- - - -0.77 -0.12 - -4.93 - -5.37 - 0.38 2.72 -3.52 -2.98 -2.46 - 0.66 - -1.03 3.3 - -2.33
AMTR_s00167p00066530 (evm_27.TU.AmTr_v1.0_scaffold00167.28)
- - - - - - - - - - - - - -1.28 0.31 - 2.79 - 3.29 1.88 - -
AMTR_s00181p00023370 (evm_27.TU.AmTr_v1.0_scaffold00181.9)
- - - - - - - - - - - - - 3.61 3.29 - - - - - - -
AMTR_s00186p00050420 (evm_27.TU.AmTr_v1.0_scaffold00186.22)
- - - - 4.46 - - - - - - - - - - - - - - - - -
AMTR_s00445p00013740 (evm_27.TU.AmTr_v1.0_scaffold00445.1)
- - - - 2.06 - - - - - 1.1 1.52 -1.7 -1.47 0.66 - 2.35 - 0.11 2.08 - -2.53
AMTR_s01680p00006160 (evm_27.TU.AmTr_v1.0_scaffold01680.1)
- - - - - - - - - - - - - 2.76 - - - - - 1.59 - 3.61
AMTR_s02163p00007920 (evm_27.TU.AmTr_v1.0_scaffold02163.1)
- - -4.11 -3.42 -1.76 -2.15 -2.29 0.34 -0.89 -0.44 -0.09 1.5 -0.27 -1.3 -1.34 -1.88 0.88 0.82 0.88 2.62 -0.07 -1.41
AMTR_s02179p00008270 (evm_27.TU.AmTr_v1.0_scaffold02179.1)
-0.52 -2.04 -3.15 -0.71 1.45 - -1.23 - -1.67 -1.14 1.49 0.7 -1.34 -0.38 0.4 - 0.26 -2.66 -0.51 1.8 -0.5 1.69
AMTR_s02740p00008080 (evm_27.TU.AmTr_v1.0_scaffold02740.1)
- - - - 0.97 - - - - - - 2.53 -3.29 -2.07 0.07 - 0.67 2.62 - 2.26 - -1.41
- - - 3.77 3.07 - - - - - - - - - - - - - - - - -
AMTR_s03191p00001420 (evm_27.TU.AmTr_v1.0_scaffold03191.1)
-0.97 -0.96 -1.22 -1.03 -3.52 -5.8 -9.4 -11.19 -10.24 -13.07 1.72 0.47 0.61 -1.5 -1.88 -5.76 1.78 0.29 -1.46 1.04 -6.2 2.58
AMTR_s03830p00001040 (evm_27.TU.AmTr_v1.0_scaffold03830.1)
- - 2.18 -2.23 -0.04 - -2.94 - -2.73 -2.04 0.63 2.28 -0.59 -2.58 1.62 -0.75 1.3 -0.37 -2.54 -0.45 - -0.45

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.