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Heatmap: Cluster_72 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00001p00234480 (evm_27.TU.AmTr_v1.0_scaffold00001.262)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.65
AMTR_s00002p00123410 (evm_27.TU.AmTr_v1.0_scaffold00002.78)
 0.0 0.0 0.0 0.0 0.02 0.0 0.01 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02 0.0 167.44
AMTR_s00002p00124320 (evm_27.TU.AmTr_v1.0_scaffold00002.79)
 0.0 0.0 0.0 0.0 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.03 0.0 144.76
AMTR_s00002p00125660 (evm_27.TU.AmTr_v1.0_scaffold00002.80)
 0.0 0.0 0.0 0.0 0.16 0.0 0.01 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02 0.0 117.07
AMTR_s00002p00125730 (evm_27.TU.AmTr_v1.0_scaffold00002.80)
 0.0 0.0 0.0 0.0 0.12 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 48.99
AMTR_s00002p00126520 (evm_27.TU.AmTr_v1.0_scaffold00002.80)
 0.0 0.0 0.0 0.0 0.01 0.0 0.04 0.0 0.01 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.06 0.0 192.63
AMTR_s00009p00242710 (evm_27.TU.AmTr_v1.0_scaffold00009.223)
 0.0 0.0 0.0 0.0 0.09 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01 0.01 0.21 0.0 0.0 0.0 0.0 0.0 0.0 2.02
AMTR_s00009p00254350 (evm_27.TU.AmTr_v1.0_scaffold00009.271)
 0.0 0.0 1.59 0.0 0.29 0.0 0.04 0.0 0.05 0.0 0.53 0.0 1.76 0.1 0.15 0.0 0.41 0.0 0.0 0.0 0.0 139.63
AMTR_s00010p00265970 (evm_27.TU.AmTr_v1.0_scaffold00010.517)
 0.0 0.0 0.0 0.0 0.77 0.0 0.01 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.16 0.0 0.17 0.0 0.0 0.85 0.0 12.9
AMTR_s00019p00199580 (evm_27.TU.AmTr_v1.0_scaffold00019.231)
 0.0 0.0 0.0 0.0 0.07 0.0 0.22 0.0 0.04 0.12 0.0 0.0 0.99 0.0 0.08 0.0 0.19 0.0 0.0 0.0 0.0 9.27
AMTR_s00019p00199860 (evm_27.TU.AmTr_v1.0_scaffold00019.232)
 0.0 0.0 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.13 0.04 0.0 0.0 0.0 0.0 0.0 0.0 0.0 9.89
AMTR_s00019p00218710 (evm_27.TU.AmTr_v1.0_scaffold00019.272)
 0.0 0.0 0.0 0.0 0.31 0.0 0.04 0.0 0.03 0.05 0.05 0.0 0.0 0.01 0.07 0.0 0.0 0.0 0.0 0.0 0.0 5.94
AMTR_s00019p00237230 (evm_27.TU.AmTr_v1.0_scaffold00019.335)
 0.0 0.0 0.0 0.0 1.25 0.0 2.14 3.14 4.64 3.45 1.46 0.16 1.14 1.78 0.74 0.56 0.53 0.14 0.22 0.02 0.0 44.53
AMTR_s00022p00201920 (evm_27.TU.AmTr_v1.0_scaffold00022.233)
 0.0 0.0 0.0 0.0 0.14 0.0 0.0 0.0 0.04 0.08 0.0 0.0 0.0 0.31 0.07 0.0 0.15 0.0 0.0 0.07 0.0 76.5
AMTR_s00025p00226550 (evm_27.TU.AmTr_v1.0_scaffold00025.322)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 104.88
AMTR_s00028p00116810 (evm_27.TU.AmTr_v1.0_scaffold00028.37)
 0.0 0.0 0.0 0.0 0.09 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.68
AMTR_s00033p00229200 (evm_27.TU.AmTr_v1.0_scaffold00033.222)
 0.0 0.0 0.0 0.0 0.0 0.0 0.01 0.0 0.07 0.11 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.01 0.0 0.7
AMTR_s00034p00239800 (evm_27.TU.AmTr_v1.0_scaffold00034.124)
 0.0 0.0 0.0 0.0 0.86 0.0 0.0 0.0 0.0 0.01 0.25 1.01 0.05 0.03 1.35 0.0 0.0 0.0 0.0 0.0 0.0 24.85
AMTR_s00034p00240370 (evm_27.TU.AmTr_v1.0_scaffold00034.126)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.05 0.0 0.15 0.01 0.0 0.0 0.0 0.0 0.0 0.02 0.0 26.41
AMTR_s00034p00240460 (evm_27.TU.AmTr_v1.0_scaffold00034.127)
 0.0 0.0 0.0 0.0 0.04 0.0 0.01 0.0 0.0 0.0 0.04 0.0 0.01 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 46.69
AMTR_s00038p00220080 (evm_27.TU.AmTr_v1.0_scaffold00038.188)
 0.0 0.0 0.0 0.0 0.11 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.92
AMTR_s00038p00226940 (evm_27.TU.AmTr_v1.0_scaffold00038.215)
 0.0 0.0 0.0 0.0 0.08 0.0 0.0 0.0 0.0 0.0 0.08 0.3 0.45 0.16 0.0 0.68 0.0 0.0 0.13 0.04 0.0 19.25
AMTR_s00039p00176410 (evm_27.TU.AmTr_v1.0_scaffold00039.139)
 0.0 0.0 0.0 0.0 0.16 0.0 0.0 0.0 0.0 0.0 0.08 0.0 0.09 0.0 0.03 0.06 0.06 0.0 0.0 0.01 0.57 9.85
AMTR_s00040p00082580 (evm_27.TU.AmTr_v1.0_scaffold00040.43)
 0.0 0.0 0.0 0.0 0.38 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 11.76
AMTR_s00041p00175670 (evm_27.TU.AmTr_v1.0_scaffold00041.133)
 0.0 0.0 0.0 0.0 0.1 0.0 0.07 0.0 0.03 0.04 0.31 0.0 0.02 0.01 0.01 0.22 0.0 0.0 0.0 0.12 0.0 1275.19
AMTR_s00041p00177300 (evm_27.TU.AmTr_v1.0_scaffold00041.138)
 0.0 0.0 0.0 0.0 0.05 0.0 0.0 0.0 0.0 0.0 0.11 0.0 0.47 0.0 0.0 0.0 0.0 0.0 0.15 0.02 0.0 30.51
AMTR_s00041p00178500 (evm_27.TU.AmTr_v1.0_scaffold00041.140)
 0.0 0.0 0.0 0.24 0.0 0.0 0.09 0.0 0.05 0.06 0.0 0.0 1.61 0.01 0.0 0.0 0.0 0.0 0.0 0.0 0.0 56.19
AMTR_s00041p00181310 (evm_27.TU.AmTr_v1.0_scaffold00041.148)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.03 0.0 0.05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 27.11
AMTR_s00041p00182080 (evm_27.TU.AmTr_v1.0_scaffold00041.149)
 0.0 4.04 0.0 0.0 0.89 0.0 0.1 0.04 0.0 0.0 35.39 10.41 0.1 36.06 22.75 1.65 27.43 6.49 0.29 0.28 0.0 1182.19
AMTR_s00041p00182920 (evm_27.TU.AmTr_v1.0_scaffold00041.151)
 0.0 0.0 0.0 0.0 0.05 0.0 0.03 0.0 0.01 0.02 0.05 0.0 0.04 0.04 0.05 0.0 0.08 0.0 0.0 0.05 0.0 88.67
AMTR_s00041p00183600 (evm_27.TU.AmTr_v1.0_scaffold00041.152)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 25.3
AMTR_s00041p00187460 (evm_27.TU.AmTr_v1.0_scaffold00041.160)
 0.0 0.0 0.0 0.0 0.13 0.0 0.0 0.0 0.0 0.03 0.0 0.0 6.69 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 44.52
AMTR_s00057p00127840 (evm_27.TU.AmTr_v1.0_scaffold00057.107)
 0.0 0.0 0.0 0.0 1.42 0.0 0.0 0.0 0.27 0.21 0.0 0.0 7.71 0.39 0.0 0.0 0.0 0.0 0.0 0.0 0.0 485.14
AMTR_s00057p00128320 (evm_27.TU.AmTr_v1.0_scaffold00057.109)
 0.0 0.0 0.0 0.0 0.01 0.0 0.0 0.0 0.01 0.01 0.0 0.0 0.28 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.0 49.47
AMTR_s00057p00159510 (evm_27.TU.AmTr_v1.0_scaffold00057.148)
 0.0 0.0 0.0 0.02 0.49 0.0 0.01 0.0 0.01 0.04 0.6 8.33 1.12 0.3 6.16 0.47 0.0 0.0 0.15 0.0 0.0 45.35
AMTR_s00059p00097920 (evm_27.TU.AmTr_v1.0_scaffold00059.72)
 0.0 0.0 0.0 0.0 0.01 0.0 0.03 0.0 0.01 0.01 0.16 0.0 0.05 0.0 0.0 0.59 0.04 0.0 0.0 0.06 0.0 686.96
AMTR_s00059p00174680 (evm_27.TU.AmTr_v1.0_scaffold00059.175)
 9.58 0.0 0.0 0.0 2.35 0.0 0.25 4.94 2.26 2.35 1.28 1.46 15.62 0.81 2.6 0.0 2.63 0.0 0.81 0.84 0.29 104.4
AMTR_s00068p00169090 (evm_27.TU.AmTr_v1.0_scaffold00068.122)
 0.0 0.0 0.0 0.0 1.3 0.0 0.02 0.0 0.02 0.02 0.0 0.0 0.0 0.0 0.02 0.26 0.0 0.0 0.0 0.0 0.0 27.2
AMTR_s00077p00066810 (evm_27.TU.AmTr_v1.0_scaffold00077.45)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 83.64
AMTR_s00088p00092690 (evm_27.TU.AmTr_v1.0_scaffold00088.55)
 0.0 0.0 0.0 0.0 0.04 0.0 0.0 0.0 0.04 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 11.0
AMTR_s00088p00093440 (evm_27.TU.AmTr_v1.0_scaffold00088.56)
 0.0 0.0 0.0 0.0 0.06 0.0 0.0 0.0 0.61 0.49 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.04 0.0 0.0 5.59
AMTR_s00098p00173330 (evm_27.TU.AmTr_v1.0_scaffold00098.57)
 0.0 0.0 0.0 0.0 0.41 0.0 0.0 0.0 0.0 0.0 0.1 0.0 1.22 0.01 0.3 0.0 0.08 1.72 1.02 0.09 0.0 22.22
AMTR_s00099p00131560 (evm_27.TU.AmTr_v1.0_scaffold00099.117)
 0.0 0.0 0.0 0.0 0.3 0.0 0.0 0.0 0.0 0.0 0.04 0.0 0.03 0.01 0.01 0.0 0.04 0.0 0.0 0.0 0.0 1.93
AMTR_s00107p00095610 (evm_27.TU.AmTr_v1.0_scaffold00107.27)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.42
AMTR_s00116p00145580 (evm_27.TU.AmTr_v1.0_scaffold00116.50)
 0.0 0.0 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.01 0.91 0.0 0.06 0.0 0.0 0.0 0.33 0.0 0.0 0.0 0.0 8.85
AMTR_s00117p00129740 (evm_27.TU.AmTr_v1.0_scaffold00117.59)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.41
AMTR_s00171p00044550 (evm_27.TU.AmTr_v1.0_scaffold00171.24)
 0.0 0.0 0.0 0.0 2.04 0.0 0.33 0.0 0.2 0.43 0.12 0.14 1.82 0.1 0.96 0.0 0.03 0.0 0.0 0.12 0.11 289.7
AMTR_s00174p00051560 (evm_27.TU.AmTr_v1.0_scaffold00174.19)
 0.0 0.0 0.0 0.0 1.33 0.0 0.21 0.0 0.25 0.34 0.0 0.85 0.04 0.02 0.4 0.0 0.0 0.0 0.0 0.15 0.0 2408.63
AMTR_s00193p00042760 (evm_27.TU.AmTr_v1.0_scaffold00193.11)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.21
AMTR_s00436p00008110 (evm_27.TU.AmTr_v1.0_scaffold00436.1)
 0.0 0.0 0.0 0.0 0.01 0.0 0.03 0.0 0.09 0.03 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 6.66
AMTR_s00913p00008360 (evm_27.TU.AmTr_v1.0_scaffold00913.1)
 0.0 0.0 0.0 0.0 0.02 0.0 0.0 0.0 0.02 0.02 0.02 3.09 0.02 0.0 0.02 2.11 0.0 0.0 0.0 0.0 0.0 17.7
AMTR_s01187p00010350 (evm_27.TU.AmTr_v1.0_scaffold01187.1)
 0.0 0.0 0.0 0.0 1.06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 15.23
AMTR_s01279p00002760 (evm_27.TU.AmTr_v1.0_scaffold01279.1)
 0.0 0.0 0.0 0.0 0.41 0.0 0.0 0.0 0.13 0.1 0.29 0.0 7.14 0.44 0.08 0.0 0.0 0.0 0.0 0.0 0.0 412.8
AMTR_s03703p00003920 (evm_27.TU.AmTr_v1.0_scaffold03703.1)
 0.0 0.0 0.0 0.0 0.17 0.0 0.0 0.0 0.0 0.0 0.36 0.0 0.05 0.13 0.0 1.08 0.0 1.09 0.0 0.0 1.96 51.01

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)