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Heatmap: Cluster_57 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00001p00155170 (evm_27.TU.AmTr_v1.0_scaffold00001.140)
 1.42 0.98 0.0 0.47 0.94 0.0 0.08 0.48 8.07 5.38 4.66 7.95 2.41 1.45 2.39 5.66 5.12 6.68 5.66 4.0 3.41 2.47
AMTR_s00001p00180560 (evm_27.TU.AmTr_v1.0_scaffold00001.174)
 0.0 0.0 0.0 0.03 0.35 0.0 0.03 0.0 2.27 0.45 1.35 1.06 0.54 0.23 0.51 0.54 3.04 0.46 2.05 0.57 3.12 0.6
AMTR_s00003p00270620 (evm_27.TU.AmTr_v1.0_scaffold00003.436)
 2.73 0.0 0.0 3.0 3.38 0.0 0.89 0.0 1.99 2.79 85.93 9.33 14.17 13.09 7.94 9.06 11.83 13.78 8.64 23.15 10.07 9.67
AMTR_s00007p00179040 (evm_27.TU.AmTr_v1.0_scaffold00007.141)
 1.07 0.0 0.0 0.28 0.02 0.0 0.01 0.58 9.11 2.65 7.28 9.82 1.74 0.19 0.1 9.17 4.85 2.4 3.42 2.36 5.37 2.76
AMTR_s00007p00195080 (evm_27.TU.AmTr_v1.0_scaffold00007.166)
 0.0 0.0 0.0 0.0 0.02 0.0 0.0 0.0 0.31 0.06 0.2 0.35 0.12 0.01 0.01 0.0 0.05 0.1 0.05 0.05 0.09 0.02
AMTR_s00007p00268180 (evm_27.TU.AmTr_v1.0_scaffold00007.389)
 0.0 0.0 0.0 0.0 1.53 0.0 1.16 0.0 2.6 1.57 2.63 1.69 1.43 0.65 0.97 0.0 0.86 0.74 3.2 1.39 2.66 0.98
AMTR_s00009p00243000 (evm_27.TU.AmTr_v1.0_scaffold00009.225)
 0.0 0.0 0.0 0.0 1.2 0.77 2.04 0.13 3.26 2.31 1.35 0.0 0.92 1.08 1.05 0.0 0.56 0.0 0.98 3.1 3.13 1.1
AMTR_s00013p00062140 (evm_27.TU.AmTr_v1.0_scaffold00013.25)
 0.0 0.0 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.59 0.0 0.0 0.0 0.13 0.25 0.0 0.32 0.0 0.0 0.0 0.18
AMTR_s00016p00192470 (evm_27.TU.AmTr_v1.0_scaffold00016.153)
 0.0 0.0 0.0 0.0 0.03 0.0 0.04 0.0 0.06 0.01 0.62 0.0 0.07 0.03 0.05 0.0 0.19 0.36 0.0 0.1 0.0 0.12
AMTR_s00019p00224080 (evm_27.TU.AmTr_v1.0_scaffold00019.287)
 0.0 0.0 0.0 0.0 0.15 0.0 0.0 0.0 0.0 0.0 0.46 0.47 0.02 0.01 0.0 0.0 0.22 0.0 0.0 0.04 0.0 0.03
AMTR_s00019p00236380 (evm_27.TU.AmTr_v1.0_scaffold00019.331)
 0.0 0.0 0.0 0.49 0.98 0.0 0.25 0.02 3.29 0.75 2.82 1.35 0.89 0.54 0.89 2.94 5.11 1.02 1.49 1.59 1.67 1.13
AMTR_s00020p00048780 (evm_27.TU.AmTr_v1.0_scaffold00020.19)
 0.0 0.0 0.0 0.88 3.14 0.0 0.0 0.0 0.0 0.0 9.56 0.0 0.29 1.17 1.4 0.0 0.0 0.0 0.0 0.92 0.0 0.32
AMTR_s00021p00233570 (evm_27.TU.AmTr_v1.0_scaffold00021.231)
 0.0 0.0 0.0 0.0 3.96 0.0 1.86 0.0 3.29 2.27 3.95 5.55 4.4 3.15 3.88 0.94 0.7 4.86 6.64 4.08 2.18 3.95
AMTR_s00023p00246300 (evm_27.TU.AmTr_v1.0_scaffold00023.221)
 0.0 0.0 0.0 0.0 3.03 0.0 0.97 0.0 6.51 5.01 6.97 0.0 2.31 5.82 4.87 0.0 0.0 0.0 10.68 0.0 0.0 0.88
AMTR_s00024p00253680 (evm_27.TU.AmTr_v1.0_scaffold00024.358)
 0.0 0.0 0.0 5.64 4.41 0.0 0.26 2.79 0.47 0.45 39.13 8.74 10.26 7.27 3.61 3.11 19.07 8.3 11.56 12.52 10.32 5.76
AMTR_s00025p00246480 (evm_27.TU.AmTr_v1.0_scaffold00025.395)
 10.19 5.37 3.65 8.42 23.34 0.38 16.04 7.36 24.98 22.25 29.05 32.97 22.0 16.8 9.37 17.56 21.37 26.0 23.54 8.97 12.95 16.35
AMTR_s00026p00035410 (evm_27.TU.AmTr_v1.0_scaffold00026.12)
 0.0 0.0 0.0 0.0 0.13 0.0 0.05 0.0 0.06 0.02 1.42 0.0 0.05 0.14 0.11 0.4 0.0 0.52 0.46 0.32 0.0 0.15
AMTR_s00029p00159840 (evm_27.TU.AmTr_v1.0_scaffold00029.193)
 0.21 0.0 0.0 0.0 0.14 0.0 0.04 0.0 0.12 0.07 2.48 0.16 0.47 0.31 0.48 0.11 1.36 0.43 0.0 0.51 0.39 0.16
AMTR_s00029p00160440 (evm_27.TU.AmTr_v1.0_scaffold00029.201)
 0.68 0.0 0.0 0.14 3.51 2.34 0.33 0.0 0.97 0.69 17.61 4.69 4.11 2.25 1.08 0.53 6.22 2.74 1.31 1.61 5.53 0.57
AMTR_s00029p00235320 (evm_27.TU.AmTr_v1.0_scaffold00029.381)
 0.0 0.0 0.0 1.09 2.99 0.0 1.46 0.0 12.8 4.29 10.05 5.45 2.93 1.8 3.02 0.0 1.38 9.54 3.94 2.41 1.43 1.13
AMTR_s00029p00235340 (evm_27.TU.AmTr_v1.0_scaffold00029.382)
 0.0 0.0 0.0 0.08 0.34 0.0 0.28 0.0 2.91 0.68 1.6 1.68 0.94 0.37 0.55 0.28 0.6 0.74 1.35 0.85 1.98 0.32
AMTR_s00029p00235350 (evm_27.TU.AmTr_v1.0_scaffold00029.383)
 0.0 0.0 0.0 0.0 0.78 0.0 0.06 0.0 3.4 1.01 3.75 0.85 1.03 0.46 0.84 0.57 0.81 2.22 1.13 0.57 1.33 0.45
AMTR_s00029p00235400 (evm_27.TU.AmTr_v1.0_scaffold00029.384)
 0.0 0.0 0.0 0.0 0.0 0.0 0.04 0.0 1.73 0.31 1.07 0.77 0.22 0.21 0.3 0.13 1.46 1.53 0.76 0.18 2.74 0.16
AMTR_s00035p00226470 (evm_27.TU.AmTr_v1.0_scaffold00035.54)
 0.85 0.0 0.8 0.0 0.59 0.0 0.02 0.0 0.05 0.05 3.99 0.59 0.17 0.17 0.06 0.16 1.28 0.25 0.52 0.07 0.27 0.04
AMTR_s00037p00188670 (evm_27.TU.AmTr_v1.0_scaffold00037.96)
 0.0 0.0 1.06 0.0 0.0 0.0 0.26 0.0 0.6 0.19 19.69 15.1 1.49 2.53 4.5 3.82 5.8 19.5 0.0 4.05 26.48 4.26
AMTR_s00040p00205640 (evm_27.TU.AmTr_v1.0_scaffold00040.212)
 2.12 0.0 0.0 4.62 7.41 0.0 0.0 0.0 0.0 0.0 397.95 69.56 25.16 1.87 16.16 6.72 79.34 8.7 8.3 6.55 7.81 78.9
AMTR_s00044p00138720 (evm_27.TU.AmTr_v1.0_scaffold00044.130)
 0.0 0.0 0.0 0.14 0.39 0.0 0.23 0.0 0.61 0.25 0.75 0.28 0.73 0.5 0.13 0.0 1.22 0.25 0.13 0.25 2.61 0.65
AMTR_s00044p00147390 (evm_27.TU.AmTr_v1.0_scaffold00044.150)
 13.08 2.91 0.9 17.45 25.08 0.0 23.28 3.16 21.7 18.68 133.44 45.74 31.7 41.61 39.74 24.06 26.47 21.41 31.45 12.27 16.22 18.53
AMTR_s00046p00195170 (evm_27.TU.AmTr_v1.0_scaffold00046.118)
 0.0 0.0 0.0 0.0 0.03 0.0 0.0 0.0 0.0 0.0 2.24 0.0 0.54 0.02 0.06 0.0 0.0 0.0 0.0 0.0 0.0 0.11
AMTR_s00048p00188390 (evm_27.TU.AmTr_v1.0_scaffold00048.143)
 0.0 0.71 0.81 0.06 3.41 0.0 1.06 0.0 1.39 1.18 3.15 5.34 0.94 1.01 0.78 1.22 3.25 0.77 2.62 1.47 1.44 0.7
AMTR_s00049p00148370 (evm_27.TU.AmTr_v1.0_scaffold00049.129)
 13.63 1.55 9.61 0.17 24.07 1.52 14.77 12.8 40.84 32.93 47.81 47.58 12.8 11.35 12.13 7.42 45.21 51.13 36.24 19.68 17.5 16.46
AMTR_s00057p00130160 (evm_27.TU.AmTr_v1.0_scaffold00057.111)
 9.47 0.0 16.03 0.0 12.05 1.19 20.31 0.0 66.2 22.34 39.1 36.33 32.22 30.59 7.2 13.51 24.66 33.39 39.53 17.53 4.28 16.28
AMTR_s00058p00097860 (evm_27.TU.AmTr_v1.0_scaffold00058.53)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.15 0.0 0.04 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00060p00189400 (evm_27.TU.AmTr_v1.0_scaffold00060.129)
 0.0 0.0 0.0 0.0 0.0 0.0 0.84 0.0 3.31 3.34 1.95 0.0 0.06 0.52 0.34 0.0 0.91 0.0 0.0 0.62 0.0 0.59
AMTR_s00064p00210050 (evm_27.TU.AmTr_v1.0_scaffold00064.107)
 0.0 0.0 0.0 0.0 0.07 0.0 0.0 0.0 0.02 0.0 0.48 0.0 0.03 0.01 0.11 0.0 0.0 0.31 0.0 0.0 0.0 0.02
AMTR_s00069p00014970 (evm_27.TU.AmTr_v1.0_scaffold00069.1)
 0.0 0.0 0.0 0.0 0.7 0.0 0.0 0.0 0.03 0.02 3.46 0.0 0.4 0.15 0.13 0.0 0.89 0.94 0.51 0.23 0.38 0.22
AMTR_s00070p00002210 (evm_27.TU.AmTr_v1.0_scaffold00070.1)
 0.0 0.0 0.0 0.0 0.51 0.0 0.0 0.0 0.32 0.12 1.8 0.87 0.3 0.11 0.61 0.0 0.81 0.0 0.17 0.17 0.0 0.5
AMTR_s00074p00108300 (evm_27.TU.AmTr_v1.0_scaffold00074.30)
 0.0 0.0 0.0 0.0 0.08 0.0 0.0 0.06 0.0 0.0 0.32 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00078p00129630 (evm_27.TU.AmTr_v1.0_scaffold00078.107)
 2.14 2.9 8.91 0.0 14.99 6.48 2.05 5.68 1.57 2.0 30.13 9.66 7.81 5.28 6.23 6.08 14.6 14.29 15.74 6.58 7.33 5.63
AMTR_s00080p00068060 (evm_27.TU.AmTr_v1.0_scaffold00080.22)
 4.24 4.31 14.08 3.07 9.83 2.1 5.53 0.4 16.14 10.38 15.18 17.37 8.22 8.41 9.87 6.73 12.01 12.71 11.67 8.95 18.89 5.41
AMTR_s00086p00057580 (evm_27.TU.AmTr_v1.0_scaffold00086.23)
 0.9 2.41 0.0 0.0 1.56 0.0 4.86 0.0 7.26 5.62 147.65 22.86 20.74 15.82 7.92 5.8 42.79 20.63 19.63 11.45 10.66 6.74
0.0 0.0 0.0 0.0 0.91 0.0 0.17 0.0 5.28 2.11 1.85 2.11 0.94 0.55 1.11 2.05 2.64 1.85 2.01 2.59 2.28 1.02
AMTR_s00091p00055060 (evm_27.TU.AmTr_v1.0_scaffold00091.12)
 0.0 0.0 0.0 0.12 0.3 0.0 0.0 0.0 0.0 0.0 1.61 0.0 0.0 0.0 0.29 0.0 0.0 0.0 0.0 0.0 0.0 0.0
0.0 0.0 0.0 0.02 0.43 0.0 0.05 0.0 0.0 0.03 1.45 0.0 0.12 0.06 0.08 0.16 0.27 0.21 0.12 0.17 0.38 0.02
AMTR_s00101p00070940 (evm_27.TU.AmTr_v1.0_scaffold00101.45)
 0.8 13.76 1.37 4.37 6.61 0.0 2.27 0.0 36.85 20.04 26.07 31.62 9.33 4.58 3.62 7.57 21.86 22.68 21.41 5.08 15.21 4.74
AMTR_s00101p00071870 (evm_27.TU.AmTr_v1.0_scaffold00101.46)
 0.8 6.2 2.91 0.23 6.34 0.0 1.12 1.63 9.02 5.39 10.92 17.2 3.02 3.14 2.21 2.69 7.03 10.19 7.05 1.18 5.73 1.43
AMTR_s00104p00099880 (evm_27.TU.AmTr_v1.0_scaffold00104.37)
 0.31 0.0 0.0 0.0 1.11 0.0 2.33 1.84 9.19 4.26 6.9 4.51 3.41 0.78 0.27 2.45 8.77 7.11 2.71 0.53 0.87 3.56
AMTR_s00108p00119250 (evm_27.TU.AmTr_v1.0_scaffold00108.32)
 0.0 0.0 0.0 0.0 0.47 0.0 0.0 0.0 0.04 0.02 0.83 0.0 0.02 0.04 0.0 0.0 0.33 0.38 0.17 0.0 0.35 0.0
AMTR_s00117p00021640 (evm_27.TU.AmTr_v1.0_scaffold00117.3)
 0.0 0.08 0.0 0.0 0.66 0.0 0.43 0.0 1.64 1.0 1.72 1.34 0.49 0.97 0.47 0.91 0.58 0.94 1.56 1.59 2.95 0.51
AMTR_s00117p00021720 (evm_27.TU.AmTr_v1.0_scaffold00117.4)
 0.0 0.0 0.0 0.0 1.61 0.0 0.8 0.15 2.19 1.62 1.37 1.61 1.41 1.51 0.68 0.44 1.07 0.32 0.96 2.08 3.04 0.69
AMTR_s00117p00079990 (evm_27.TU.AmTr_v1.0_scaffold00117.22)
 0.0 0.0 0.0 0.0 0.31 0.0 0.08 0.0 0.0 0.0 5.94 0.0 0.19 0.59 0.72 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00126p00127750 (evm_27.TU.AmTr_v1.0_scaffold00126.67)
 0.0 0.0 0.0 0.0 0.27 0.0 0.04 0.0 0.0 0.0 0.49 0.0 0.0 0.03 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00129p00103960 (evm_27.TU.AmTr_v1.0_scaffold00129.82)
 0.0 0.0 0.0 0.06 0.42 0.0 0.0 0.0 0.0 0.0 1.12 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.21 0.0 0.0
AMTR_s00153p00050510 (evm_27.TU.AmTr_v1.0_scaffold00153.21)
 0.0 0.0 26.58 0.47 5.13 0.0 1.63 0.0 5.98 3.45 67.18 23.62 13.59 5.88 8.14 15.97 5.98 20.67 23.41 6.96 18.55 7.87
AMTR_s00155p00033200 (evm_27.TU.AmTr_v1.0_scaffold00155.15)
 0.0 0.0 0.0 0.02 0.87 0.0 0.05 0.0 8.76 1.18 3.98 2.67 0.49 0.26 1.31 0.8 3.2 2.34 1.16 1.51 1.4 1.39
AMTR_s00168p00063320 (evm_27.TU.AmTr_v1.0_scaffold00168.23)
 0.0 0.0 0.0 0.0 0.23 0.0 0.2 0.0 0.91 0.52 0.51 0.28 0.56 0.62 0.31 0.09 0.91 0.12 0.41 0.15 1.43 0.55
AMTR_s00177p00030400 (evm_27.TU.AmTr_v1.0_scaffold00177.8)
 0.0 0.0 0.0 0.0 0.34 0.0 0.01 0.0 1.0 0.32 0.86 1.31 0.36 0.13 0.13 0.68 1.21 1.15 1.1 0.54 0.54 0.45
AMTR_s00188p00036850 (evm_27.TU.AmTr_v1.0_scaffold00188.6)
 0.0 0.0 0.0 0.0 0.1 0.0 0.0 0.0 0.0 0.0 1.62 0.0 0.32 0.08 0.29 0.0 0.22 0.0 0.55 0.71 0.52 0.0
AMTR_s00194p00047120 (evm_27.TU.AmTr_v1.0_scaffold00194.23)
 0.99 1.4 1.33 0.0 0.08 0.0 0.0 0.0 3.83 1.71 3.8 2.84 1.12 0.01 0.03 1.02 1.23 2.45 2.24 0.01 3.04 0.7
AMTR_s01345p00008380 (evm_27.TU.AmTr_v1.0_scaffold01345.2)
 0.0 0.0 0.0 0.0 0.23 0.0 0.0 0.0 0.0 0.0 0.85 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s03326p00002660 (evm_27.TU.AmTr_v1.0_scaffold03326.1)
 0.0 0.0 0.05 0.0 0.51 0.0 0.0 0.0 0.0 0.0 0.79 0.0 0.0 0.0 0.0 0.0 0.0 0.95 0.0 0.0 0.0 0.0

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)