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Heatmap: Cluster_179 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
-1.39 -2.09 -1.69 -1.44 -1.6 -1.15 -0.99 -0.45 -0.15 -0.36 -0.4 -0.76 -1.5 -0.56 1.07 1.47 -0.62 2.02 1.35 0.54 -0.33 -0.0 0.47 -0.69 -0.67 -0.68
-0.94 -1.0 -0.27 -0.53 -0.12 -0.9 0.29 0.33 -0.52 0.51 0.28 -0.26 -0.96 0.53 -0.24 0.91 0.61 0.97 0.32 0.01 -0.9 -0.71 0.0 -0.58 0.34 -0.26
-0.93 -1.1 -0.85 -0.64 -0.76 -1.15 -0.14 0.06 -0.63 0.25 -0.16 -0.54 -1.74 0.7 0.42 1.14 0.9 1.29 0.32 0.29 -0.48 -1.6 0.4 -0.76 0.52 -0.37
-2.72 -1.35 -0.99 -0.6 -0.3 0.06 -0.13 0.25 0.73 0.44 0.25 -0.16 -3.03 0.53 0.64 0.68 0.24 0.29 0.4 0.02 -1.73 -0.05 0.61 -0.2 0.09 0.08
-1.24 -1.6 -0.84 -0.65 -0.22 -0.9 0.03 0.03 -0.36 0.36 -0.06 -0.46 -1.65 0.47 -0.13 0.97 0.56 1.04 0.42 -0.01 -0.85 0.02 0.63 0.37 0.29 -0.33
-1.51 -1.35 -1.14 -0.46 -0.29 -0.27 0.39 0.44 0.66 0.54 0.07 -0.0 -1.09 0.85 0.11 0.88 0.15 0.59 -0.01 -0.09 -0.82 -0.44 0.44 -0.07 -0.74 -0.43
-0.94 -0.53 0.09 0.07 0.21 0.03 0.39 0.26 0.23 0.13 0.15 -0.17 -0.68 0.34 0.77 0.52 0.1 0.5 0.4 -0.0 -1.42 -0.51 -0.39 -0.42 -0.65 -0.64
-0.52 -1.04 -0.67 -0.5 -0.29 -0.57 0.09 0.13 -0.53 0.3 0.31 0.04 -0.79 0.92 -0.1 0.91 0.44 0.39 0.07 -0.17 -1.24 0.03 0.56 -0.27 0.12 -0.11
-1.85 -1.5 -0.93 -0.35 -0.03 -0.13 0.26 0.3 0.56 0.55 0.1 -0.34 -1.78 1.03 0.3 1.17 0.08 0.66 -0.03 -0.13 -1.74 -1.04 0.29 -0.24 -0.25 -0.14
-1.25 -1.28 -0.82 -0.56 -0.62 -0.8 0.17 0.3 -0.27 0.22 -0.03 -0.47 -1.34 0.69 -0.03 1.06 0.69 0.9 0.22 0.24 -1.14 0.38 0.27 -0.47 0.3 -0.28
-1.86 -1.39 -0.96 -1.19 -1.44 -2.78 -2.38 -2.08 -1.74 -1.51 -0.97 -1.42 -2.84 0.24 1.29 2.75 -0.79 2.44 0.91 1.09 -1.83 -1.89 -2.64 -4.78 -2.15 -1.3
-1.49 -0.67 -0.82 -0.88 -1.48 -2.16 -2.63 -1.81 -0.94 -1.31 -0.42 -0.75 -1.98 0.17 1.29 2.8 -0.66 1.83 1.02 1.21 -2.34 -1.95 -4.55 -2.79 -1.74 -1.43
-1.4 -3.94 -1.59 -1.66 -2.47 -4.01 -3.13 -2.15 -0.7 -0.66 -0.43 -0.53 -1.94 0.13 1.16 2.67 -0.39 1.85 1.38 0.59 -0.68 -1.64 -2.26 -0.29 -0.8 -0.62
-0.62 -1.22 -1.41 -1.05 -0.64 -0.51 0.14 -0.17 -0.38 0.19 0.51 0.48 -0.17 1.18 0.69 1.31 1.05 0.71 0.98 0.44 -3.7 -1.26 -3.69 -1.77 -1.02 -1.49
-0.68 -1.17 -2.12 -1.26 -0.48 -0.76 -0.1 -0.11 -0.51 -0.1 0.74 0.32 -0.13 1.26 0.52 1.4 1.16 0.78 1.01 0.33 -3.24 -1.33 -4.04 -2.93 -0.34 -1.11
-0.83 -2.11 -2.22 -2.13 -1.11 -1.24 -0.95 -0.85 -1.21 -0.48 -0.07 -0.3 -0.7 1.29 0.92 1.62 1.43 1.42 1.24 0.28 -2.73 -0.83 -2.83 -1.19 -0.01 -0.65
-1.5 -1.89 -2.41 -2.33 -1.66 -1.29 -1.19 -1.14 -1.81 -0.75 -0.67 -0.68 -1.55 1.3 0.86 1.67 1.55 1.85 1.26 0.32 -2.22 0.14 -2.85 -1.86 -0.09 -0.73
-2.37 -2.44 -2.23 -2.35 -2.1 -2.01 -1.71 -1.66 -0.99 -0.15 -0.08 -0.35 -1.64 0.7 1.47 0.85 1.7 1.73 1.05 0.89 -1.61 -1.16 -1.13 0.64 -0.85 -0.66
-4.11 -3.55 -2.94 -2.4 -1.45 -0.59 -0.19 -0.13 0.91 0.96 1.02 0.64 -2.6 0.4 0.72 0.96 -0.0 0.03 0.56 1.23 -1.6 -2.56 -0.76 0.47 -0.04 -0.07
-1.41 -1.07 -0.54 -0.26 -0.15 -0.42 0.19 0.34 -0.03 0.35 0.32 -0.03 -1.85 0.42 -0.08 0.92 0.43 0.54 0.05 0.33 -2.15 -0.59 0.91 -0.01 0.02 -0.36
-0.63 -0.84 -0.77 -0.5 -0.4 -0.48 0.19 -0.13 -0.42 0.15 -0.05 -0.31 -0.66 0.72 0.2 0.85 0.42 0.37 0.05 -0.02 0.07 0.49 0.49 -0.47 -0.09 -0.12
-0.46 -0.74 -0.73 -0.34 -0.48 -0.58 0.26 0.39 0.16 0.23 0.44 -0.09 -0.29 0.43 0.43 0.74 0.28 0.92 0.16 -0.19 -2.09 -0.35 0.29 -0.21 -0.39 -0.62
-1.41 -1.33 -0.65 -0.39 -0.2 -0.29 0.03 0.1 0.4 0.57 0.52 0.35 -0.96 0.8 0.21 0.91 -0.01 0.16 0.07 0.04 -1.07 -0.27 -0.12 0.22 -0.41 -0.11
-2.0 -1.33 -1.25 -0.54 0.06 -0.32 0.16 0.1 0.56 0.41 0.24 -0.06 -2.05 0.82 0.3 0.86 0.05 0.23 -0.12 0.01 -1.07 -0.01 0.5 0.46 -0.42 0.09
-3.09 -2.2 -1.64 -1.02 -0.54 -0.39 0.38 0.23 0.43 0.52 0.21 -0.33 -2.92 0.65 0.38 1.05 0.65 1.11 0.84 0.2 -3.11 0.01 -0.26 -0.21 -0.06 -0.55
-2.05 -1.04 -0.55 -0.39 0.01 0.22 0.21 0.08 0.47 0.32 -0.06 -0.32 -1.3 0.74 0.39 0.88 0.17 0.45 0.12 0.18 -1.23 -0.24 0.48 -0.17 -0.39 -0.35
-2.62 -1.99 -0.87 -0.72 -1.13 -0.6 0.33 0.44 0.85 0.78 0.38 0.13 -2.17 0.51 0.14 0.81 -0.09 0.92 0.08 0.12 -0.92 -0.49 -0.03 -0.17 0.01 0.25
-1.47 -1.24 -0.64 -0.32 -0.29 -0.1 0.32 0.61 0.32 -0.07 -0.43 -0.45 -1.58 0.64 0.65 0.91 0.38 0.84 0.08 0.53 -1.27 0.03 -0.06 -1.06 -0.33 -0.05
-3.28 -3.25 -2.0 -1.93 -1.08 -0.5 0.43 0.22 0.92 0.77 0.3 -0.11 -2.67 1.11 1.03 1.08 0.25 0.88 0.15 -0.37 -0.97 -2.35 0.37 0.08 -0.44 -0.56
-1.36 -1.13 -0.44 -0.14 -0.23 -0.09 0.45 0.48 0.53 0.24 -0.14 -0.28 -1.14 0.52 0.18 0.76 0.08 0.59 0.02 0.23 -1.26 -0.23 0.18 -0.45 -0.05 0.05
-4.93 -4.46 -3.48 -2.48 -1.77 -1.33 -0.1 -0.23 -0.08 0.43 0.31 -0.44 -3.49 0.96 1.3 1.62 1.05 1.65 0.66 -0.75 -1.34 -0.9 0.3 -0.84 -0.67 -0.73
-4.27 -4.3 -3.27 -2.35 -1.56 -1.07 0.18 -0.03 0.32 0.48 0.35 -0.08 -3.35 0.85 1.21 1.41 0.78 1.51 0.65 -0.71 -1.26 -1.33 0.55 -0.87 -0.52 -0.61
-3.99 -3.65 -2.85 -2.11 -0.97 -0.5 0.48 0.21 0.76 0.88 0.69 0.29 -2.69 0.8 1.41 1.25 0.7 1.02 0.65 -0.88 -1.88 -1.88 -0.33 -1.09 -1.38 -1.09
-2.01 -1.59 -1.01 -2.68 -2.05 -1.16 -2.39 -1.68 -1.3 -0.28 0.14 0.36 -0.97 1.61 0.76 2.1 0.03 1.76 0.73 0.43 -1.39 -2.89 -2.15 -0.45 -0.68 -0.14
-2.55 -3.28 -2.84 -2.51 -2.72 -3.93 -3.56 -2.61 -2.4 -0.88 -0.69 -1.16 -2.41 1.54 1.15 2.47 -0.35 2.41 1.1 0.53 -3.29 -1.96 -3.31 -0.45 -0.89 -0.2
-3.5 -5.24 - -5.74 -3.81 -5.57 -4.71 -3.83 -2.06 -2.43 -3.04 -3.14 -4.4 0.44 1.36 2.5 -0.33 2.53 0.91 -0.8 1.31 -4.4 -0.68 0.9 -1.26 -0.11
-1.14 -0.98 -0.85 -0.19 0.29 -0.06 -0.04 -0.11 0.55 0.28 0.36 0.25 -1.61 0.85 0.16 0.63 -0.51 0.48 0.28 -0.41 -1.17 -0.77 0.19 0.58 -0.17 -0.02
-2.66 -0.79 -0.33 -0.02 0.09 -0.33 0.31 0.38 0.22 0.22 0.05 -0.38 -2.5 0.89 0.25 0.98 0.82 1.11 0.29 0.41 -3.35 -0.5 -0.86 -1.01 -0.59 -0.42
-3.46 -1.82 -1.13 -0.75 -0.52 -1.67 -0.69 -1.19 -0.59 -0.62 -0.31 -0.92 -2.71 0.7 0.61 1.14 1.38 1.95 1.06 0.84 -1.79 -1.22 -0.67 -1.12 0.49 -0.35
-1.1 -2.1 -2.37 -1.83 -1.56 -2.18 -1.1 -1.11 -0.88 0.3 0.32 0.32 -0.6 1.68 1.4 1.32 0.76 1.01 0.44 0.82 -2.7 -4.32 -0.56 -0.15 -0.33 -0.61
0.67 -0.31 -0.75 -0.87 -0.69 -0.52 -0.07 -0.01 -0.24 -0.61 -0.51 -0.9 0.6 1.07 0.48 1.67 0.11 1.71 0.89 -0.03 - -3.04 -3.18 -2.35 -1.39 -1.99
-2.95 -2.05 -0.8 -0.2 -0.22 -0.23 0.75 0.7 0.53 0.41 -0.2 -0.57 -2.72 0.83 0.19 0.82 0.57 0.74 -0.03 0.32 -1.41 -0.42 -0.32 -0.61 0.24 -0.21
-2.42 -1.43 -0.8 -0.51 -0.12 0.11 0.21 0.32 0.79 0.37 0.4 0.0 -1.84 0.72 0.15 0.72 -0.22 0.31 -0.04 -0.09 -1.26 -0.41 0.77 0.23 -0.31 -0.2
-0.37 -1.16 -1.15 -0.89 -0.96 -1.04 -0.19 0.1 0.16 0.31 0.44 0.28 -0.16 1.43 0.62 1.43 0.02 0.98 0.41 -0.19 -3.22 -0.8 -0.91 -1.15 -0.59 -0.83
-2.76 -1.09 -1.25 -0.53 -0.02 0.37 -0.21 -0.29 0.77 0.64 0.61 0.27 -2.22 0.16 0.12 0.56 -0.11 0.08 0.26 -0.16 -2.8 0.39 0.56 0.2 -0.04 0.36
-1.03 -0.91 -0.56 -0.28 -0.29 -0.46 0.35 0.2 0.08 0.38 -0.03 -0.2 -0.87 0.74 0.38 0.91 0.49 0.52 0.5 0.31 -1.65 -0.57 0.04 -0.73 -0.08 -0.24
-1.25 -1.16 -0.82 -0.63 -0.55 -1.09 0.05 0.03 -0.56 0.3 -0.15 -0.55 -1.29 0.86 0.26 1.11 0.69 1.03 0.48 0.23 -1.09 -0.22 0.42 -0.72 0.25 -0.08

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.