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Heatmap: Cluster_104 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
- - - - - - 3.13 - - - - - - 1.86 - - - - - 3.76 - - - - - -
- - 1.96 - - - - - - - - - - - 0.33 2.36 - 0.74 1.66 2.41 -0.58 - 1.36 - - 1.23
3.71 - - - - - - - - - - - - - - - - - - 3.69 - - - - - -
- - - - - - - - - - 1.82 - - - 1.8 - - - - 3.66 - 2.67 - - - -
1.77 - 1.82 - - - 0.71 0.72 0.75 - 1.67 - - - - 0.68 - 1.35 1.53 1.95 - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - -2.9 - - 2.51 1.74 2.15 1.67 0.66 1.34 0.74 1.13 -0.3 -3.57 - - -1.46
-0.14 -0.63 -1.02 -3.01 -1.56 -0.72 1.49 -0.5 -0.15 -0.39 -1.13 -0.98 -0.38 -0.5 -0.09 0.99 -0.05 0.91 1.02 2.44 -1.07 -3.48 -0.56 -2.48 -0.71 -
1.91 - - - - - - - - - - - 1.17 - - - - 1.11 0.42 3.56 -0.21 - - 1.38 - 0.27
2.73 - - - 2.3 - - - - - - - - - - - - - - 3.85 - - - - - -
-2.82 -2.01 -0.54 0.21 -0.4 1.69 0.08 - -0.87 - -2.03 - -2.06 0.74 1.54 0.45 1.66 1.19 1.39 1.27 -3.4 -1.72 -3.33 -3.06 - -0.64
1.0 - - - - 1.21 - - - - - - - 0.72 - - 1.53 1.74 - 3.79 - - - - - -
- - - - - - - - - 1.05 - - - 1.52 - 1.06 - 0.42 3.21 3.07 - - - - - -
- - - - - - -0.54 - -0.06 - -0.74 -1.65 - 2.07 2.43 0.54 2.35 0.36 1.07 1.5 -2.68 - -2.12 -1.85 -1.39 -
- - - - - - - - -0.71 - - - - 2.01 2.12 1.61 2.61 1.73 0.14 1.05 -1.14 - - - - -0.12
- - - - - - -0.7 - - - - - - 1.46 1.56 2.16 1.31 1.91 1.16 1.72 -0.29 0.29 0.02 - - -1.4
- - - - - - - - - - 3.84 - - - - - - - 3.55 - - - - - - -
- - - - - - - - - - - - - 2.8 2.62 1.87 1.04 0.39 1.55 1.55 - - - - - -
- - - 3.49 - - - - - - - - - - - - - 2.66 - 3.08 - - - - - -
- - - - - - - - - - - - - 2.73 1.89 0.94 -0.79 1.07 1.48 2.98 - -1.42 - - - -
2.29 - - - - - - - - - - 2.25 - - - - - - - 3.42 1.21 1.76 - - - -
- - - - - - - 1.98 2.0 - 1.92 - - - - - - - - 3.22 0.97 1.56 - - - -
- - - - - - - - - 3.05 - - - - - - 3.4 - - 2.84 - - - - - -
- - - - - - - - - - - - - - - - - - 3.85 3.53 - - - - - -
- - 2.25 - - 1.26 - - 2.3 1.2 - - - - - - - 1.1 1.17 2.51 - - - - 0.63 -
-1.87 1.22 0.74 -2.72 -0.07 -1.09 -0.01 -2.59 - -0.68 -1.28 - - 0.91 2.29 1.95 0.71 -0.09 0.73 1.43 - -3.2 - -2.38 -3.48 -
- - - - - - 1.52 - 1.56 3.0 2.45 - - - - - - - 2.75 - - - - - - -
- - - - - - - - 3.87 - - - - - - - - - - 3.51 - - - - - -
3.04 - - - - - - - - - - - - - - - - - - 4.15 - - - - - -
- -0.26 -0.66 -1.58 -0.47 -1.02 -3.04 -0.75 -3.26 -1.01 -3.32 - - 1.85 2.32 1.54 0.8 -0.33 1.66 1.36 -1.63 -0.59 - - -0.28 -
- 1.13 - - - 1.13 - 1.09 - - - 0.97 1.31 - 0.79 - - 1.24 0.87 2.14 1.19 - - - 0.26 0.3
0.49 -1.55 1.23 0.8 -2.1 -0.66 - 1.42 0.2 1.13 -0.25 - 0.95 0.9 -0.89 -0.07 -0.08 -0.36 - 2.1 -0.2 - - -1.9 - -
0.35 - - - - - 0.57 0.58 1.79 1.59 1.37 -0.53 - -0.8 -0.89 2.15 -0.41 -0.05 1.08 0.71 - - - - - -0.06
-1.07 - -1.21 - -1.02 -0.96 - - 0.47 -0.33 0.35 - -1.32 -0.09 - 0.77 2.71 1.91 2.03 1.65 - - - - - -
1.66 -0.55 -1.63 -3.21 -3.39 -2.33 0.18 1.0 0.7 1.13 1.64 1.2 1.46 0.03 - 0.15 -0.09 -0.27 0.16 -0.27 - - - - -1.1 -
- - - - - - - - - - 1.43 - - - - - 2.69 1.92 1.45 2.73 - - - - - 1.89
- - 0.79 -0.71 1.49 0.22 0.41 - -0.8 -0.88 - 0.3 - - - - 0.77 0.66 1.95 2.53 -0.78 - -0.45 0.81 - -
- - - - - - - - - - 2.88 - - - - - - - 2.8 3.55 - - - - - -
-0.0 - - 0.26 - - - - - - 0.31 - - 0.72 - 1.84 1.54 -0.44 1.64 2.98 -0.68 1.05 - - - -
-0.47 0.74 -0.34 -1.38 -0.49 -1.21 0.68 -0.34 0.57 0.78 1.65 0.23 1.02 0.28 -1.71 -0.47 -1.23 -2.2 1.58 1.79 - - - - - -
-0.61 -0.56 - 0.13 -2.3 -1.95 0.33 0.89 -1.12 1.39 0.94 0.22 -1.31 0.84 -0.03 0.94 1.48 -1.09 1.19 1.67 - - - - - -
1.23 - -0.84 - - 0.18 0.76 1.28 1.83 2.06 1.15 -0.74 -0.4 - - 0.7 0.98 -0.48 0.39 -0.16 - - - - - -
0.36 -0.13 -1.26 -1.19 -1.07 - -0.06 0.9 1.38 1.65 1.05 - - 1.27 - 1.02 - 0.25 1.83 1.41 - - - - - -
- - - - - - - - - - - - - - - - - - - 4.7 - - - - - -
0.62 - -2.13 - - - - -1.17 - -1.24 -2.2 -1.03 -2.23 2.25 2.51 1.24 1.68 0.3 0.61 1.8 -2.06 - - - - -
- - - - - - - - - - - 2.58 - - - - 2.72 - - 3.75 - - - - - -
- - - - - - - - - - 3.18 - - - - - - - 4.08 - - - - - - -
- - - - - - - - - 3.8 - - - - - - - - - 3.59 - - - - - -
- - - - - 0.68 - 1.32 - - 1.94 - - 1.81 - 0.57 0.63 2.0 - 2.91 - - - - - -
- - - - - - - 3.34 - - - - - - - - - - - 3.99 - - - - - -
- -1.55 0.53 -1.72 - - - - -0.2 -0.9 1.16 -1.69 - 2.58 1.43 2.0 -1.56 0.23 0.75 0.94 -1.78 -0.61 -2.46 -1.9 -0.43 -
- - - 2.65 - 1.72 0.34 - -0.13 -0.16 - 0.99 -0.22 - - - - -0.65 - 2.73 0.2 1.08 - - - -
-0.16 -0.77 -0.78 - - 0.47 - -0.8 -0.89 - - -0.92 - 2.1 2.54 -1.03 1.16 0.11 1.62 1.04 0.13 - - -1.11 -1.63 -
- - - - - - -0.21 1.38 - - - - 0.02 2.55 - 1.54 1.37 1.02 1.1 2.58 - - - - - -
- - - - - - - - - 3.52 - - - - - - 3.86 - - - - - - - - -
0.59 1.03 1.12 - - - - 1.95 - 0.8 0.82 1.0 - 1.53 - 1.87 - - - 1.57 - 0.49 - - - -
0.67 0.04 -0.68 -0.83 - - - -0.7 -0.86 -1.02 -0.94 - 0.26 1.25 0.88 - - -1.45 -0.08 2.57 1.01 1.64 - - -1.58 0.9

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.