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Heatmap: Cluster_122 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
3.01 3.89 3.46 5.2 7.04 5.79 4.82 3.68 5.83 7.15 8.04 7.22 3.25 7.75 6.39 5.35 5.61 5.1 4.76 3.88 7.65 22.77 19.65 12.42 11.06 8.49
10.57 7.71 6.5 7.37 7.2 6.44 7.37 8.4 6.52 5.48 6.4 6.73 10.91 7.06 7.08 8.13 5.97 10.82 8.53 4.71 6.05 20.28 16.69 10.0 12.03 8.4
7.62 5.85 5.69 12.12 12.46 6.62 5.87 7.83 7.97 9.94 15.33 9.97 6.42 7.66 4.06 40.08 6.08 9.42 7.48 5.67 13.49 29.92 36.21 16.93 25.28 24.34
7.77 9.31 7.52 8.21 7.17 4.51 5.79 5.93 6.26 5.68 6.41 6.49 6.55 5.08 5.35 6.13 5.95 9.73 6.26 6.8 3.21 10.05 15.66 9.25 10.84 6.35
1.71 2.99 3.6 3.94 4.89 4.84 4.2 4.75 3.52 3.62 3.94 2.87 1.5 2.48 2.89 3.2 3.08 7.83 3.59 3.97 0.78 6.07 13.42 6.91 5.04 4.12
18.38 11.23 10.21 13.14 13.13 10.98 9.52 9.86 8.4 7.64 10.93 14.55 19.86 6.99 5.43 6.41 5.85 10.4 7.27 5.92 7.74 37.36 21.2 12.75 17.48 13.22
17.42 19.82 17.02 19.04 21.62 25.72 25.26 22.98 21.28 19.17 18.86 17.39 15.61 20.82 20.47 22.01 17.75 25.49 18.73 13.87 19.12 34.23 34.73 27.73 27.15 22.31
0.84 1.27 1.28 1.6 2.47 2.42 2.45 2.02 1.98 0.97 1.35 0.7 0.24 1.07 1.14 1.19 1.3 1.5 1.69 1.54 2.75 3.54 6.99 1.56 3.32 2.41
1.34 1.18 1.66 2.06 2.71 1.89 1.45 1.66 2.42 3.18 6.44 8.67 2.27 0.96 0.67 0.88 1.12 1.22 0.4 0.56 6.82 26.49 33.74 15.1 15.42 8.33
9.47 5.65 4.49 6.92 6.26 4.57 6.96 8.26 7.0 7.8 9.84 8.39 9.23 5.4 4.94 5.43 5.01 8.64 7.88 4.38 9.65 25.21 20.94 16.25 14.0 9.97
89.39 118.89 93.11 79.9 51.19 43.21 58.2 76.92 72.38 53.82 50.07 58.69 70.56 53.94 63.91 64.16 69.91 118.16 112.31 75.86 36.15 105.39 185.55 84.47 136.68 106.41
3.67 2.73 2.77 3.2 4.53 5.78 3.77 4.19 5.33 5.44 5.16 6.47 2.68 2.44 2.54 2.23 2.8 5.07 3.65 2.87 3.26 24.54 25.8 19.34 15.62 10.51
12.02 10.57 9.99 13.87 13.91 6.67 12.85 13.23 12.34 13.91 16.7 14.69 12.95 14.43 14.86 19.11 9.62 15.49 13.07 6.82 18.33 24.99 25.82 10.71 22.56 13.85
16.44 11.87 10.37 11.03 10.54 9.47 12.19 12.77 10.84 11.72 11.84 12.62 15.64 8.58 11.76 13.85 9.94 15.74 13.28 10.02 9.87 30.74 21.14 10.17 12.29 8.96
4.29 3.02 2.92 4.67 4.66 4.35 6.24 6.48 8.0 7.26 7.65 5.89 4.25 6.22 4.02 17.13 3.86 5.06 3.31 3.12 8.42 11.31 12.77 5.59 10.82 7.69
0.63 2.61 3.82 5.65 4.76 3.79 3.92 4.6 4.36 4.28 5.16 4.32 1.03 3.34 5.6 2.91 2.57 7.96 4.73 2.65 6.38 12.31 13.3 5.62 10.72 9.06
4.31 5.39 4.35 4.83 5.24 6.76 5.92 4.85 5.82 6.26 5.91 6.62 3.58 8.52 8.87 9.92 5.8 9.64 8.84 4.68 5.12 14.27 22.82 8.63 11.03 9.81
12.18 13.29 11.69 15.25 20.19 18.56 20.42 19.66 22.61 23.74 23.67 19.16 13.94 15.01 17.36 13.74 16.16 24.73 20.5 16.21 17.8 31.25 38.46 29.24 25.76 21.95
1.92 1.66 1.82 2.78 2.41 2.78 3.23 3.25 3.58 3.25 3.65 3.64 1.8 2.84 1.89 2.41 1.51 2.09 2.12 1.54 2.07 9.31 7.18 6.22 4.34 3.71
3.01 4.67 5.09 7.53 9.24 9.06 9.59 9.29 10.14 10.21 10.48 9.39 3.05 8.2 7.16 6.57 7.39 8.8 8.08 5.62 7.89 14.81 14.32 17.05 13.24 12.72
0.73 3.04 5.2 5.87 6.39 6.27 7.27 7.11 7.58 6.15 6.94 5.86 0.41 7.22 6.9 8.07 6.1 9.01 6.51 5.59 6.42 15.04 29.74 12.79 14.82 11.91
2.27 3.86 4.29 4.79 6.02 5.62 5.0 6.68 8.87 8.55 10.0 8.52 2.23 6.05 5.42 6.4 3.12 7.91 4.75 4.95 9.48 14.2 16.4 11.17 9.42 10.19
13.2 8.6 6.33 8.13 6.53 4.51 9.38 11.25 11.04 12.59 14.21 12.45 15.48 8.07 9.66 9.38 7.06 10.26 8.98 6.31 11.02 36.17 19.73 13.39 12.58 11.2
2.59 1.83 1.62 2.51 2.5 2.28 2.85 2.64 2.73 2.49 2.76 1.77 1.64 2.09 1.9 2.29 1.4 2.82 2.43 1.62 5.49 14.55 13.87 7.4 7.98 5.23
4.9 3.42 3.37 5.95 5.39 4.26 6.74 6.75 7.1 7.18 9.11 7.26 5.42 6.1 3.84 15.46 3.27 4.09 2.48 2.37 4.81 11.17 9.21 9.33 9.57 7.91
1.78 0.88 0.71 0.79 1.03 1.12 1.89 1.45 1.66 1.51 1.66 1.33 1.49 1.83 1.08 2.85 1.03 0.72 0.68 0.45 0.47 5.57 4.72 1.91 4.03 4.05
23.19 21.35 26.49 27.71 29.59 26.83 26.25 25.22 25.06 26.81 24.41 26.08 21.44 24.45 28.67 26.14 20.8 30.0 24.71 23.64 21.53 61.15 53.92 22.8 39.07 39.45
7.11 6.09 6.76 8.02 7.31 5.72 7.13 8.38 8.94 8.64 7.18 7.41 6.87 8.77 6.87 20.19 5.9 6.12 4.62 5.53 5.91 19.57 22.98 9.23 16.6 17.28
1.66 2.08 2.54 4.86 4.27 3.74 4.69 3.72 2.75 2.57 2.02 1.87 1.13 4.94 4.13 5.48 2.2 3.4 2.81 2.48 4.94 8.2 13.26 5.3 5.47 4.63
238.63 240.53 186.16 224.66 218.15 198.03 231.01 211.15 219.29 215.3 213.77 233.19 215.47 162.92 188.13 265.69 232.36 225.1 205.24 188.87 161.98 346.02 333.06 256.44 234.08 178.2
2.36 2.63 2.37 2.97 3.62 2.93 4.04 3.88 5.11 4.62 6.08 5.19 2.36 4.91 4.54 3.51 4.37 8.39 5.84 3.62 11.44 16.35 19.59 10.69 11.88 11.45
57.92 59.72 54.58 64.7 52.49 42.13 39.31 42.95 50.45 43.35 55.29 62.21 54.62 52.47 26.73 62.17 47.65 39.21 42.59 36.8 12.29 76.44 108.5 74.35 105.78 60.28
4.8 3.03 4.02 5.19 7.9 7.06 7.74 8.03 11.38 9.14 8.52 4.72 1.93 14.47 10.98 38.49 10.77 20.1 14.01 7.93 26.1 95.53 134.56 54.09 58.79 47.49
12.91 13.6 13.52 18.9 17.96 12.76 20.48 17.57 19.11 18.92 18.66 15.5 12.43 17.28 17.91 21.87 19.81 33.28 23.84 16.47 20.34 45.66 52.58 24.92 26.98 24.67
4.01 3.8 2.74 3.68 2.85 2.0 2.01 2.76 2.33 3.36 3.86 4.69 4.42 5.29 3.2 4.01 2.1 3.09 3.24 1.86 1.52 6.78 6.57 4.42 6.18 6.99
0.19 0.17 0.15 0.38 0.33 0.22 0.32 0.31 0.35 0.29 0.34 0.4 0.08 0.51 0.46 0.51 0.33 0.9 0.75 0.26 2.08 3.7 5.9 2.03 2.31 1.25
9.39 8.34 5.97 7.63 5.43 4.56 6.14 7.46 6.44 6.11 7.55 6.2 10.05 5.65 6.16 7.55 7.87 9.89 8.54 8.26 3.34 32.72 19.69 9.94 20.95 13.12
3.64 2.15 1.62 3.82 2.88 3.22 3.11 4.58 2.95 3.52 2.03 2.71 2.99 2.41 1.02 1.47 1.6 3.66 2.85 1.76 2.09 15.7 9.47 3.24 8.21 4.15
71.95 53.11 43.09 76.89 83.06 72.93 62.45 83.03 91.39 66.96 68.99 52.92 57.62 15.85 22.32 61.3 26.56 56.47 59.76 50.86 79.93 133.5 100.35 67.48 133.61 117.7
40.37 36.25 30.72 28.5 27.82 33.45 32.85 34.11 26.64 20.44 20.91 21.6 34.67 20.82 16.5 17.61 18.22 21.82 22.62 16.27 21.44 55.87 56.82 30.75 52.82 34.63
2.83 2.86 1.85 3.0 3.71 3.14 1.28 1.39 1.73 1.63 2.73 3.23 3.43 1.72 0.94 1.5 1.33 1.7 1.56 1.28 1.0 3.31 7.03 4.34 4.86 3.32
4.02 4.71 3.43 6.49 6.06 6.08 5.51 4.59 4.89 4.42 5.16 4.32 3.08 4.26 5.36 4.12 4.29 7.17 6.14 4.12 4.61 13.82 12.54 6.42 8.22 6.46
12.43 16.75 17.51 21.85 17.87 14.78 16.72 17.01 14.59 12.61 14.51 17.13 16.21 13.48 13.99 13.53 12.12 20.39 15.38 11.31 15.62 21.99 30.62 15.52 22.82 17.33
2.79 2.56 2.52 2.15 3.83 2.64 3.05 2.96 2.51 3.18 2.95 3.32 2.26 3.29 2.83 4.12 2.71 3.0 2.15 2.23 1.6 6.16 11.84 4.32 6.58 3.56
1.07 2.91 2.84 4.11 4.24 3.5 3.54 4.72 4.12 4.16 4.63 4.3 1.07 3.95 3.92 3.78 2.36 5.18 2.81 2.6 4.91 8.18 14.83 5.86 8.25 5.94
20.96 19.93 18.27 30.06 24.07 12.98 14.16 20.42 16.85 12.33 13.51 12.45 14.56 5.34 5.1 6.25 5.16 10.03 8.93 8.51 11.8 44.63 64.88 23.93 33.41 30.2
0.49 0.22 0.14 0.2 0.05 0.11 0.22 0.21 0.13 0.17 0.45 0.52 0.31 0.37 0.14 0.38 0.03 0.21 0.22 0.1 0.23 1.05 1.23 0.34 0.56 0.71
51.82 58.08 42.0 40.96 40.14 38.12 55.82 53.4 47.96 37.84 35.72 39.9 39.88 43.22 39.47 52.78 58.7 56.89 52.66 48.49 47.53 79.76 114.14 88.27 61.38 50.22
44.3 38.97 38.81 35.0 34.35 38.61 37.46 35.61 34.0 28.92 31.13 34.75 36.09 31.98 37.59 32.25 43.46 61.51 53.6 41.34 47.65 94.86 130.55 104.55 76.27 86.25
0.26 0.21 0.28 0.38 0.22 0.25 0.29 0.35 0.32 0.27 0.34 0.28 0.26 0.06 0.0 0.04 0.17 0.26 0.18 0.2 0.23 1.87 0.9 0.45 1.68 0.87
4.99 9.65 12.48 15.77 10.85 6.89 7.53 10.75 8.15 8.15 10.09 9.46 2.64 5.21 3.62 6.57 5.7 9.56 7.54 7.15 6.61 28.21 31.64 11.03 16.88 20.7
208.36 144.96 131.83 204.11 175.0 156.97 146.85 184.65 136.07 107.15 112.7 82.44 168.15 89.91 111.33 76.68 94.12 120.35 141.73 114.1 131.96 299.61 451.84 143.34 274.74 181.45
9.54 7.22 8.14 8.71 7.88 7.89 8.02 12.05 8.09 8.11 6.42 7.22 6.92 3.03 4.36 4.07 6.13 9.89 10.13 5.62 8.47 19.51 14.82 7.82 12.75 13.08
0.83 2.64 5.15 8.94 9.31 9.02 9.12 7.84 10.09 7.9 10.18 6.19 0.39 8.05 8.48 7.27 6.06 10.62 9.17 5.5 7.35 16.5 19.91 19.0 14.85 13.15
14.93 10.86 10.35 10.54 10.67 7.96 12.37 12.79 9.99 9.49 10.18 8.92 14.17 14.93 12.79 14.21 9.8 19.5 15.33 10.55 5.04 24.48 22.12 12.27 16.18 14.4
3.37 2.82 2.43 3.39 3.16 2.0 2.91 2.93 3.1 2.89 3.03 3.25 2.71 2.82 2.83 6.64 2.57 3.42 3.07 2.29 1.09 9.59 7.81 3.68 6.8 5.83
11.31 9.89 9.81 8.18 10.44 11.03 10.88 11.0 10.46 11.35 11.34 10.09 8.84 13.19 12.24 14.17 10.93 12.34 12.56 9.92 12.79 26.39 33.45 15.84 13.67 19.21
0.16 0.18 0.23 0.39 0.37 0.28 0.33 0.46 0.67 0.56 0.56 0.35 0.15 0.23 0.44 0.36 0.2 0.96 0.73 0.14 0.74 2.58 4.62 1.6 1.42 0.82
0.06 0.16 0.0 0.09 0.24 0.04 0.1 0.15 0.09 0.14 0.06 0.12 0.06 0.1 0.06 0.09 0.23 0.27 0.13 0.09 0.03 0.41 0.49 0.49 0.75 0.41
41.24 34.52 45.24 45.33 46.31 36.14 30.3 31.09 40.03 42.66 54.86 60.45 43.73 30.95 26.09 39.31 35.73 32.43 35.02 34.27 18.12 39.89 105.82 86.51 43.32 40.28
2.11 1.65 1.12 1.26 0.89 0.65 0.67 1.12 1.67 1.63 1.81 2.34 1.69 1.07 0.85 1.52 1.2 1.0 1.32 0.97 1.03 0.48 4.82 2.85 1.47 1.88
5.59 2.46 1.04 2.61 3.65 3.04 5.19 5.43 4.3 3.69 3.95 2.45 4.14 2.42 1.43 2.78 1.45 2.98 2.63 1.04 2.83 9.54 7.83 2.77 11.07 5.56
2.08 1.62 1.14 1.17 1.01 0.74 1.04 1.34 1.29 1.2 1.58 1.38 1.28 2.26 1.45 2.19 1.08 3.19 2.62 1.08 0.66 4.33 4.1 2.91 3.84 3.06
9.56 8.47 8.81 8.61 8.9 8.58 7.89 7.98 6.93 7.18 6.78 7.01 8.46 6.49 6.95 6.18 6.36 6.34 6.72 5.07 3.12 12.73 14.77 7.47 9.7 9.44
2.05 2.17 1.76 1.82 1.88 1.36 1.77 2.19 1.92 1.94 2.22 2.22 2.01 1.95 1.39 2.53 1.05 2.26 1.76 1.18 1.33 4.71 5.96 4.3 3.49 2.86
1.61 1.63 1.13 1.81 1.76 1.98 1.83 1.61 1.53 1.51 2.05 1.54 1.55 3.38 3.44 3.1 2.35 3.03 2.91 1.69 2.56 5.34 7.17 3.79 4.53 3.68
10.82 13.25 13.32 15.13 15.23 14.06 9.26 9.3 11.35 8.45 13.49 17.17 11.57 9.39 8.51 11.42 13.53 8.72 8.86 7.32 3.44 19.63 33.12 23.64 21.29 10.39
4.26 3.33 1.79 2.65 3.13 2.98 4.01 2.98 2.97 4.24 3.53 1.92 4.31 2.69 2.18 2.17 1.15 2.89 2.38 1.71 1.05 9.57 7.46 3.84 9.88 5.41
5.84 3.16 2.79 3.79 2.56 2.15 3.5 3.41 4.09 3.7 4.59 5.32 4.99 3.73 4.2 3.63 2.72 5.7 5.23 2.75 4.22 9.45 8.07 4.93 5.09 4.29
0.17 0.03 0.02 0.38 0.31 0.14 0.19 0.3 0.22 0.25 0.67 0.3 0.02 0.18 0.33 0.09 0.02 0.46 0.24 0.23 0.26 2.93 1.66 0.88 2.03 0.97
2.68 1.99 2.8 4.2 3.91 5.16 6.01 4.9 4.59 3.31 2.54 3.36 2.19 5.52 5.27 5.99 4.6 5.38 6.41 3.8 9.95 13.06 17.94 6.99 14.4 9.6
2.15 0.97 0.91 1.51 1.41 0.58 0.78 0.96 0.92 1.38 1.86 2.06 1.58 1.95 0.99 1.42 0.87 1.88 1.2 0.62 1.95 8.18 5.12 3.07 2.66 1.53
0.21 0.08 0.16 0.2 0.37 0.28 0.34 0.29 0.38 0.37 0.55 0.63 0.18 0.04 0.1 0.37 0.09 0.16 0.06 0.11 0.02 0.1 1.27 1.26 0.34 0.26
0.2 0.02 0.05 0.2 0.3 0.25 0.42 0.26 0.34 0.43 0.51 0.7 0.16 0.12 0.06 0.56 0.07 0.13 0.03 0.05 0.07 0.16 1.66 0.85 0.17 0.47
4.38 3.4 4.37 6.97 6.53 5.86 7.0 6.47 7.9 7.46 7.06 5.77 3.59 7.38 7.21 7.98 5.75 9.76 7.79 6.14 7.68 24.13 22.16 9.82 8.73 9.96
97.28 74.01 69.74 90.34 108.69 94.77 117.02 117.98 92.89 99.18 98.05 85.95 118.64 90.35 74.25 96.66 88.11 118.34 49.45 70.09 106.37 241.84 290.48 134.14 161.5 153.49
101.58 72.24 72.34 92.16 115.48 125.23 119.07 114.46 98.45 98.51 98.58 94.74 142.56 83.12 82.07 88.96 90.42 95.71 56.6 71.45 66.66 185.46 223.18 93.77 137.21 129.9
3.51 3.66 3.23 5.2 4.19 3.08 4.85 4.45 5.46 5.77 6.38 6.89 4.15 4.73 4.82 4.08 5.7 6.18 4.41 3.67 1.84 17.45 20.85 11.09 15.14 10.26

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)