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Heatmap: Cluster_77 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
0.82 -0.55 -0.65 -0.35 -0.45 -0.96 -0.52 -0.63 -0.4 -0.36 0.04 0.69 0.94 0.15 0.05 -0.33 -0.69 -0.11 -0.46 -0.44 -1.95 0.94 0.24 -0.11 0.81 0.54
-0.21 -2.01 - 0.69 -1.69 -0.58 - -1.38 0.45 0.64 -0.02 0.5 - - - - - -2.18 - -0.97 -2.03 2.85 0.8 1.41 1.91 -2.17
1.65 -0.83 -3.73 -1.85 -0.72 -0.53 0.55 0.51 0.01 -0.13 -0.02 -0.51 1.27 -1.11 -2.0 -2.05 -1.57 -0.63 -0.85 -1.31 -1.71 1.49 0.4 1.09 0.73 -0.68
0.74 -0.68 -0.91 -0.89 -0.5 -0.07 0.38 0.4 0.23 -0.05 -0.21 -0.3 0.88 -0.19 0.14 0.1 -0.61 0.13 -0.01 -0.9 -1.12 0.93 0.4 -0.03 -0.0 -0.52
0.35 -0.19 -0.81 -0.43 -0.31 -0.49 -0.4 -0.31 0.16 -0.35 0.33 -0.06 0.61 -1.05 -1.53 -1.26 -1.1 -0.23 -0.43 -1.61 0.36 1.82 0.84 0.34 0.33 0.06
- - - -0.47 0.35 - - - -1.5 -1.66 -1.58 -1.46 - - - 0.59 -1.32 0.12 -0.76 - 1.75 2.24 -0.21 1.0 2.5 1.27
1.63 0.53 0.08 0.09 -1.57 -2.38 -1.31 -0.22 -0.61 -0.45 0.1 0.04 1.15 -1.94 -1.44 -2.41 -2.35 -0.36 -0.53 -1.74 -4.42 1.1 -0.17 0.28 1.68 0.63
0.57 0.08 -0.21 -0.17 -0.57 -1.01 -0.88 -0.84 -0.88 -0.49 -0.19 -0.01 0.52 0.15 0.44 0.41 -0.25 -0.28 -0.41 -0.9 -1.82 0.85 0.36 0.33 0.99 0.6
0.58 0.15 -0.05 -0.22 -0.72 -1.34 -0.77 -0.68 -0.83 -0.49 -0.17 0.11 0.67 0.26 0.4 0.5 -0.15 -0.14 -0.55 -0.71 -2.03 0.74 0.14 0.43 0.84 0.42
0.38 -0.4 -0.47 -0.77 -1.08 -1.1 -0.38 -0.23 -0.46 0.03 0.12 0.48 0.62 0.23 0.3 0.16 -0.06 0.36 0.09 0.2 -0.73 0.51 -0.17 -0.06 -0.06 0.58
1.09 0.33 -0.21 -0.59 -0.75 -1.26 -0.79 -1.16 -1.2 -1.0 -0.97 -0.46 1.32 -0.26 -0.6 -0.25 -0.04 -0.06 -0.5 -0.67 0.28 1.15 -0.93 0.72 0.57 0.75
0.59 0.29 0.13 0.08 -0.47 -0.76 -0.54 -0.6 -0.57 -0.19 0.14 0.62 0.54 -0.0 -0.52 -0.28 -0.47 -0.36 -0.5 -0.59 -2.0 0.77 0.02 0.7 0.64 0.38
1.32 0.1 -0.44 -0.26 -1.04 -2.13 -1.94 -0.71 -1.85 -0.88 -0.04 0.05 1.27 -0.52 -0.75 -0.3 -1.8 0.36 -0.22 0.03 -1.14 0.92 -1.15 0.58 1.39 0.65
0.52 0.1 -0.21 0.09 0.44 -0.44 0.21 -0.02 -0.45 -0.29 0.4 -0.1 0.01 -0.93 -1.48 -1.67 -1.94 -0.21 -0.65 -2.43 -1.06 1.6 -0.34 0.85 0.7 0.73
-0.65 - - -0.85 - - -0.14 - - -0.04 -1.96 -1.84 - - - - - - - - 1.95 3.02 1.59 -1.32 2.53 0.32
1.44 0.05 -1.15 -0.33 -1.77 -2.29 -0.64 0.0 -0.46 -0.08 0.04 0.04 1.15 -0.61 -0.89 -0.53 -1.85 -1.2 -1.39 -1.31 -2.9 1.62 -0.0 0.47 1.39 0.39
1.34 - -0.31 -0.46 - - - - - -1.91 -1.9 - - - - - - - - - -1.55 3.36 0.57 0.97 2.79 -1.12
-5.3 -4.86 - 0.95 0.4 -4.99 - -3.52 -3.42 -0.91 -0.75 -0.15 -1.98 -1.48 -5.25 -1.33 - -3.27 -3.77 - -1.74 2.88 - -4.39 3.46 -0.84
0.67 0.33 0.03 -0.3 -0.47 -0.73 -0.28 -0.19 -0.16 -0.02 0.03 0.11 0.46 0.07 0.08 -0.3 0.02 0.15 -0.17 0.01 -0.69 0.57 -0.32 -0.13 0.11 0.13
-0.26 -0.78 0.01 -0.83 0.48 -2.11 -1.63 -1.21 -0.19 -0.08 -0.07 0.11 -1.72 -4.03 -2.37 -0.38 -1.09 -0.51 -1.41 -3.77 0.17 2.52 0.85 -0.63 1.44 0.88
0.76 -0.1 -0.42 -0.71 -0.48 -0.19 0.18 0.37 0.03 -0.38 -0.4 -0.86 -0.1 -0.7 -0.98 -0.77 -0.58 0.15 -0.29 -0.58 -3.56 1.56 0.07 0.65 1.15 0.15
0.59 -0.32 -0.44 -0.65 -1.25 -1.52 -0.39 0.05 -0.12 0.12 0.35 0.11 0.43 -0.66 -0.15 0.2 -0.17 0.23 0.05 -0.28 -2.71 1.51 -0.23 0.06 0.39 0.3
1.38 0.26 -0.2 -0.14 0.23 -0.23 0.16 0.32 -0.34 0.01 0.15 0.17 1.26 -2.03 -1.56 -2.5 -1.76 -0.3 -0.49 -1.09 -1.39 1.56 0.05 -1.81 0.37 -0.72
1.38 0.54 -0.02 -0.03 -0.59 -0.54 0.15 -0.54 -0.62 -0.5 -0.68 -0.3 0.93 -1.33 -1.84 -2.16 -1.42 -0.18 -0.03 -0.72 -0.32 1.69 0.89 -1.55 0.12 0.1
1.36 -0.33 -0.57 -0.05 0.51 0.31 0.22 0.66 -1.01 -0.99 -0.83 -1.22 0.63 -0.79 -1.79 -2.3 -1.44 -0.76 -0.27 -1.24 -1.73 1.5 -1.57 -0.09 1.35 0.87
-1.01 -3.47 -1.71 -0.62 -0.88 -0.49 -0.24 -0.23 0.06 0.16 -0.17 -0.76 -2.34 -1.85 -1.69 0.17 -2.18 -0.05 -1.8 -2.34 -0.13 2.24 1.34 0.92 1.74 -0.21
-2.55 - - -2.32 - - - - - - -3.44 - - - - - - - - - 2.21 3.74 0.59 -1.8 2.1 0.53
0.69 -0.53 -1.5 0.14 -0.83 -0.9 -0.45 0.25 -0.17 0.23 0.18 0.22 0.67 -0.45 -1.41 -0.43 -1.29 -1.05 -1.92 -1.29 -2.19 1.33 0.47 -0.22 1.59 0.89
-0.49 -0.13 -1.6 0.17 -0.11 -3.58 -1.81 -0.64 -0.09 0.12 0.82 -0.34 0.12 - -2.11 -1.64 -3.4 -2.22 -1.86 -2.95 -0.1 2.23 2.07 -0.27 1.19 0.14
-2.47 - - - - - - -2.28 -2.18 - - - - - - - - - - - 1.48 3.58 1.04 - 2.45 1.65
- - - - - - - - - - - - - - - - - - - - 1.06 3.52 0.41 0.52 2.97 0.92
1.35 -0.02 -1.21 -1.1 -1.95 -1.12 -0.44 0.23 -0.44 -0.13 -0.19 0.07 0.88 -0.93 -1.04 -0.8 -0.83 -0.54 -0.45 -1.24 -1.69 0.61 0.83 1.35 0.93 0.55
0.35 0.06 0.13 -0.01 -0.15 -0.04 -0.01 -0.03 -0.32 -0.26 -0.19 -0.12 0.3 -0.21 -0.16 -0.48 -0.52 -0.4 -0.08 -0.35 -2.27 0.61 0.23 0.34 0.82 0.58
1.22 0.04 -1.17 -1.7 -0.93 -0.31 0.52 0.35 -0.24 -0.31 -0.62 -0.79 1.05 0.09 -0.06 -0.28 -0.02 0.22 0.26 -0.29 -3.75 0.86 0.79 -0.53 -0.15 -0.57
0.53 0.25 -0.1 -0.32 -0.56 -0.3 -0.08 0.21 -0.2 -0.21 -0.02 0.33 0.77 -0.62 -0.31 -0.13 -0.28 -0.82 -0.88 -0.54 -2.16 1.01 -0.05 -0.67 1.38 -0.1
-3.62 - -1.58 0.73 0.37 -0.52 0.95 0.73 0.37 0.84 -1.01 -1.59 -3.57 -3.36 -3.55 -3.98 -2.79 -1.15 -2.19 -2.78 -1.0 2.24 -1.11 -1.54 2.73 -1.11
0.48 -0.42 -0.17 -0.27 -0.06 0.07 0.19 0.1 0.04 -0.11 -0.34 -0.42 0.46 -0.24 -0.01 -0.04 0.0 0.3 0.37 0.16 -1.01 0.1 0.23 -0.27 -0.12 0.13
1.07 -0.48 -1.06 -0.56 -0.88 -0.79 0.01 0.22 -0.21 -0.46 -0.1 -0.69 0.48 -0.07 -1.33 -0.47 -0.57 -0.15 -0.64 -1.34 -2.22 1.89 0.1 0.48 0.89 0.35
1.24 -0.62 -1.33 -0.33 -0.56 -0.38 0.28 0.38 0.15 0.4 0.15 -0.41 1.1 -1.6 -2.21 -1.63 -2.58 -1.15 -1.82 -2.64 -1.85 2.22 -0.23 -0.54 1.27 -0.81
-0.17 -0.65 -3.48 0.36 -0.83 -3.7 -1.26 -1.45 - -1.48 -0.91 -0.45 -0.95 -3.3 -3.8 - -3.74 -2.25 -2.88 - -2.01 3.06 0.06 0.18 2.72 0.64
1.32 0.2 -0.95 -0.94 -0.25 0.58 0.79 0.96 -0.08 -0.24 -0.42 -1.13 1.17 -1.97 -1.99 -2.44 -1.07 -0.04 -0.15 -0.73 -6.34 0.38 -0.16 0.03 1.1 0.05
-0.49 -1.05 - -1.11 -1.0 -1.18 - - - -1.28 -1.23 - - - - - - -0.35 - - 0.64 3.42 2.17 0.41 1.16 0.57
0.76 -0.4 -0.93 0.05 -0.32 -1.07 -0.99 -0.33 -0.27 0.41 0.43 0.21 0.89 -1.64 -2.86 -0.99 -1.34 -1.01 -1.52 -0.96 -2.33 1.24 0.73 0.86 1.51 0.4
0.6 -0.24 -0.69 -0.86 -0.86 -0.85 0.21 0.17 -0.13 -0.04 -0.14 -0.3 0.62 -0.58 0.21 -0.29 -0.46 0.54 0.25 -0.42 -0.85 1.81 -0.5 -0.5 -0.16 -0.29
-0.67 -0.83 - 1.15 - - -1.0 -2.75 -1.62 -1.05 0.38 0.07 0.08 - -1.94 - - -2.19 - -3.15 0.73 2.67 -3.15 1.46 2.28 0.48
0.34 -1.03 -0.92 1.41 -1.42 -3.68 -1.77 0.14 -0.75 -1.01 0.37 0.33 -0.91 -2.81 - - - -2.93 -1.28 -2.72 -2.78 2.5 0.38 -0.0 2.07 0.92
1.0 0.6 0.15 0.29 -0.04 -0.86 -0.9 -0.67 -1.2 -0.82 -0.63 -0.29 0.9 0.44 -0.3 -0.27 -0.06 -0.36 -0.61 -0.64 -1.34 0.67 -0.94 0.38 0.92 0.48
1.33 -0.88 -2.7 -2.25 -1.14 -0.16 0.64 0.64 0.16 -0.29 -0.28 0.01 1.06 -0.85 -1.01 -1.44 -0.6 -0.01 -0.2 -0.84 -0.33 1.37 0.67 -0.18 0.26 -0.5
- - - - - - - - -1.82 -2.25 -0.5 - -4.27 0.2 -0.71 -0.89 0.08 1.17 -1.55 -1.98 -1.48 2.76 1.49 0.39 2.45 0.88
0.82 0.85 0.28 0.09 -0.96 -1.87 -1.04 -1.49 -1.32 -0.71 -0.34 0.19 0.69 0.17 -0.06 -0.1 -0.07 0.32 0.31 -0.7 -0.96 1.12 -0.77 0.14 0.53 0.11
- - - -1.26 - - - - - - -0.38 - - - - - - - - - - 3.84 - - 3.27 -0.34
0.88 0.68 0.14 0.41 -0.64 -1.77 -1.35 -0.84 -1.0 -0.66 -0.05 0.18 0.69 0.07 -0.49 -0.15 -0.48 0.03 -0.01 -0.88 -1.13 0.77 -0.38 0.2 0.88 0.63
-0.54 -0.48 -0.33 -0.63 -0.98 -2.02 -0.8 -0.21 -1.0 0.04 -0.72 -0.13 -0.69 -3.19 - -2.01 - -0.03 -1.7 -2.23 0.47 2.91 -1.82 -1.52 2.39 -0.6
- - - - - - - - -0.14 - - - - - - -0.14 - -0.87 - - - 3.62 -0.5 2.39 1.8 0.93
1.39 -0.11 -0.9 -0.43 -0.7 -0.72 0.26 0.56 0.0 0.02 0.17 0.01 1.1 -1.08 -1.16 -1.34 -1.39 -0.62 -0.52 -1.34 -3.2 1.53 -0.22 -0.6 1.09 -0.15
0.49 0.08 -0.19 -0.18 -0.26 -0.86 -0.37 -0.16 -0.16 0.13 0.3 0.26 0.48 -0.26 -0.19 -0.34 -0.4 -0.24 -0.72 -0.12 -1.14 0.52 0.27 0.62 0.46 0.36
1.25 0.07 -1.17 -1.06 -0.35 0.07 0.62 0.46 0.11 -0.11 -0.31 -0.61 1.02 -1.9 -1.13 -2.25 -0.22 0.28 0.04 -0.51 -1.2 0.94 0.66 -0.13 0.14 -0.45
1.67 0.3 -0.98 -0.77 -1.81 -2.5 -0.76 -0.57 -0.5 -0.25 0.25 0.54 1.93 -1.69 -1.44 -0.85 -3.89 -0.67 -0.9 -1.73 -2.22 1.05 0.5 1.06 0.58 -0.49
0.06 0.08 -0.29 0.25 0.29 0.09 0.14 0.19 0.21 -0.0 0.1 0.33 0.34 -0.19 -0.45 -0.72 -1.14 -0.92 -1.25 -1.5 -1.38 1.24 0.04 0.2 0.58 0.29
0.44 -1.76 -1.99 -1.39 -1.17 0.01 -1.16 0.19 -1.28 -1.18 -3.39 -2.64 -0.85 0.41 -1.82 -1.26 -2.74 -1.06 -0.33 -2.49 -0.09 2.14 -1.4 0.2 2.87 0.22
1.49 -1.69 - - -1.37 -1.06 0.15 0.67 -0.15 -0.26 -0.05 -1.4 0.6 -2.49 -2.59 -1.98 -0.96 -0.83 -1.33 -2.08 -3.18 2.24 1.11 0.49 1.65 -0.24

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.