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Heatmap: Cluster_42 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
0.29 -0.74 -2.05 2.32 1.62 0.41 0.95 0.59 0.19 1.52 1.75 0.63 -0.54 - -3.73 -2.65 -3.66 -1.55 -1.89 -3.01 - - - -3.74 - -1.47
- - - 4.7 - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - -
0.85 0.65 -0.28 1.67 1.26 0.26 -1.12 0.24 -0.58 -0.45 -1.05 -0.77 0.57 -0.76 -0.01 0.07 -1.38 -0.04 -0.07 -1.0 -1.37 -1.41 0.08 -0.93 0.22 -1.05
1.19 0.41 -2.33 2.23 1.3 -0.63 -0.18 -0.53 -1.46 -1.22 -0.3 -1.35 -0.59 1.02 -0.4 1.34 -0.73 -1.1 -0.19 -1.18 -2.27 -3.84 -1.67 -0.96 -2.09 0.16
1.09 0.7 -0.22 0.68 -2.64 -0.66 -0.68 -0.08 0.77 2.14 0.44 0.92 1.54 - -0.85 -2.36 -2.14 1.1 0.07 -0.72 - - - -1.44 - -
-0.48 -0.3 -0.54 0.52 0.46 0.3 0.33 0.65 0.36 0.17 0.24 -0.14 -1.08 0.02 0.49 0.31 -0.2 0.52 0.7 -0.17 -2.1 -1.09 -0.55 0.2 -0.97 -1.18
-1.85 -2.03 -0.5 -1.29 -1.86 - -1.16 -1.33 1.61 1.51 2.15 1.8 - - 2.53 -3.02 0.17 -3.46 -1.92 -2.14 -3.36 - -1.41 -0.14 -3.59 -1.47
1.61 - 1.91 1.99 - - 2.12 1.8 1.9 - 1.88 - - - - - - - - - - - - - - -
1.98 1.28 -0.2 2.53 1.97 1.39 -0.2 -0.14 - - - - -1.31 1.91 - - -0.97 - - - - - - - - -
0.25 -0.52 -0.45 0.75 0.96 -0.13 0.51 0.42 0.03 -0.26 0.02 -0.61 -0.3 -1.19 -0.42 -0.49 -0.64 0.41 0.38 -0.84 -2.41 0.68 -0.03 -0.26 0.35 0.19
- - - 3.73 - - - 3.67 - - - - - - - - - - - - - - - - - -
1.21 - - 2.53 - 1.42 - - - - - - - - - - 3.07 - - 2.14 - 1.26 - - - -
0.27 0.66 0.02 0.46 1.15 0.63 0.58 0.54 0.52 0.54 0.62 -0.59 -0.53 -1.28 -0.45 -1.12 -0.69 -0.1 -0.6 -0.03 -4.56 -1.54 -1.37 -1.34 -0.08 0.48
-0.83 -0.47 -0.85 -0.97 1.8 -0.88 -0.73 -0.42 -1.08 1.12 1.57 1.55 1.36 -2.58 -1.65 -2.15 -2.92 0.57 -0.3 -2.24 -2.0 -0.34 -1.94 -1.66 -0.12 0.37
-0.41 -1.3 -1.38 -1.35 -1.63 0.46 0.54 0.46 0.34 0.91 0.76 0.81 -0.45 0.94 0.69 0.77 -1.13 0.78 -0.16 -0.95 -3.86 -3.04 -0.38 1.14 -3.26 -3.13
-0.48 -1.18 -1.65 -1.26 -0.24 0.63 0.74 0.4 0.62 1.2 1.3 1.21 -0.01 0.23 0.27 -0.11 -1.28 1.01 -0.22 -1.35 -3.59 -4.57 0.03 -0.39 -2.85 -3.42
-0.5 -0.25 0.76 0.78 1.01 -0.23 -0.38 -0.97 -0.47 0.31 0.69 1.1 1.67 -0.29 -1.28 -1.56 -0.65 -0.98 -1.89 -0.8 -3.88 -0.72 -1.12 -0.84 -0.59 1.06
1.08 0.49 0.19 0.53 0.29 -0.02 0.25 0.42 0.52 0.27 0.51 0.33 1.01 -0.85 -0.65 -0.25 -0.58 -0.6 -0.75 -0.45 -2.07 -0.91 -0.73 -1.01 -0.5 -0.8
-0.3 -0.98 -0.89 -0.05 0.24 0.23 0.44 0.5 0.71 0.91 1.14 0.82 0.29 -0.16 0.1 -0.51 -0.34 0.26 -0.14 -0.36 -2.61 -4.48 -0.53 0.33 -1.17 -1.26
1.13 0.8 0.34 0.34 0.53 0.43 -0.42 0.06 -1.28 -0.5 -0.69 -0.24 1.09 -0.22 1.97 -0.95 -1.07 -0.92 -0.82 -0.73 -4.68 -0.09 -2.86 -1.04 -0.43 -1.22
1.7 -2.02 -0.34 2.37 0.57 -2.48 -0.72 1.53 -0.13 -0.96 0.58 0.05 0.8 -1.08 -2.29 - - -1.11 -1.04 -2.1 -2.25 -1.2 -4.42 -0.05 0.14 0.1
- 3.09 0.84 3.25 - - - - - - - - - - - - - 0.3 - 0.76 0.91 - 0.47 - - -
- 0.18 - 3.55 2.54 1.72 1.05 - - - 0.63 - - - - - - - - - - -1.22 - - - -
- - - 4.12 - - - - - - - - - - - - - - - - 3.1 - - - - -
0.17 -1.03 -0.91 0.71 0.95 -0.68 -0.22 0.83 1.54 0.69 1.78 0.31 -1.05 -3.1 -1.94 -5.19 -4.08 -2.37 -3.26 -2.97 -2.68 0.54 1.39 -1.16 0.63 -2.05
0.88 0.25 -1.1 0.86 0.62 -0.67 0.16 0.83 0.9 0.5 1.09 1.06 0.09 -2.04 -1.96 -2.1 -2.6 -1.07 -1.41 -2.8 -1.52 -2.42 -0.61 0.62 0.44 0.11
0.33 -0.13 -0.83 1.03 0.59 0.41 0.34 1.29 1.11 -0.56 1.12 -0.06 -0.49 -0.84 -0.46 -0.31 -1.39 -0.27 0.37 -1.05 -3.46 -1.68 -0.29 -2.03 -1.43 0.1
0.6 -0.09 -0.02 0.44 0.53 0.47 0.49 0.98 0.74 0.52 0.8 0.03 0.06 -0.69 -0.96 -0.85 -0.58 -1.08 -0.02 -0.72 -3.07 -1.56 -0.55 -1.58 0.56 -0.52
0.24 0.13 -0.22 1.2 0.58 0.5 0.03 0.9 1.44 0.3 1.1 -0.07 0.1 -1.19 -0.56 -0.48 -2.49 -1.57 -0.31 -1.17 -2.69 -3.54 0.49 -2.92 -2.17 0.12
0.56 -0.96 -3.6 2.06 0.92 -0.08 0.24 1.63 0.27 1.33 0.78 0.14 -2.41 -2.96 -2.77 -3.46 -1.17 -1.3 -1.31 -2.95 - -0.92 -0.87 - 1.24 -0.49
-0.25 0.66 - 1.07 1.41 -0.54 0.02 -1.08 0.91 0.77 -0.17 0.95 0.88 -0.85 - -2.0 -0.17 0.65 - - -0.78 -0.46 0.36 -0.66 0.21 -0.4
1.43 -1.48 -3.08 1.44 1.5 -1.25 -0.11 0.84 1.62 1.74 1.16 0.18 -1.67 -3.67 -3.33 -1.49 - -1.71 -0.28 -3.17 -2.77 -0.08 -2.59 - -0.24 -2.62
0.81 0.06 -0.1 0.53 0.7 0.67 0.24 0.39 0.52 0.6 0.83 0.38 0.25 -1.59 -0.34 -0.42 -0.84 -0.57 0.24 0.43 -2.63 -1.4 -1.68 -1.33 -1.35 -0.69
1.31 - 1.85 3.28 - - - - - - - 1.73 2.78 - - - - - - - - - - - - -
0.17 0.21 -0.81 0.43 0.35 0.02 0.45 0.72 0.91 0.5 0.9 0.06 0.07 -0.51 0.3 -0.13 -0.25 -0.13 0.58 -0.36 -3.91 -1.01 -1.2 -1.7 -0.75 -1.1
0.3 0.2 0.37 1.44 0.97 0.49 0.2 0.41 0.5 0.32 0.51 0.3 0.41 -0.99 -0.38 -0.8 -1.04 -0.3 -0.25 -1.26 -2.39 0.06 -1.31 -1.49 -1.22 -1.68
0.47 -0.21 0.2 0.4 0.08 -0.05 0.33 0.59 0.53 0.32 0.59 0.38 0.3 -0.45 -0.69 0.28 -1.49 -0.93 -0.43 -0.18 -2.06 -1.29 -0.15 -0.18 -0.01 0.34
-0.09 0.1 0.0 0.29 0.83 0.1 0.43 0.57 0.42 1.07 1.18 1.34 1.06 -0.97 -1.02 -1.27 -1.02 0.74 -0.99 -0.94 -3.03 -3.42 -3.03 -1.11 -3.12 -1.93
-0.14 0.06 -0.4 0.41 0.71 0.22 0.66 0.36 0.7 1.1 1.16 1.29 1.06 -0.85 -0.95 -0.65 -1.1 0.76 -0.86 -1.42 -2.98 -3.45 -3.28 -1.63 -3.84 -1.89
0.81 0.39 -0.58 0.64 1.12 -0.82 -0.23 -0.09 -0.01 0.65 1.35 1.0 1.86 -2.11 -2.28 -0.93 -1.07 0.09 -1.53 -0.84 -1.0 -2.31 -2.18 -3.64 -2.56 -0.2
1.01 0.93 -2.65 1.8 1.14 0.31 -2.45 1.23 - 0.42 0.51 -2.56 -1.46 0.13 - - - -2.07 -1.82 -1.88 - 0.78 -3.03 0.24 0.27 1.61
- - - 3.67 2.49 1.02 1.01 - - - - 1.11 - - - - - - - - 0.56 - - - - -
0.7 0.35 -0.13 1.37 0.32 0.33 0.35 0.57 0.38 -0.51 0.24 0.47 0.72 -0.19 -0.28 0.93 -2.79 -0.87 -1.06 -2.61 -4.54 -2.27 0.26 -0.49 -0.7 -1.3
- - - 3.28 2.16 2.27 - - - - - - - - - - - - - 2.17 1.32 - - - - -
0.08 0.2 -0.01 -0.34 -0.02 0.29 0.31 0.15 0.59 0.23 0.49 0.05 0.28 0.36 -0.12 -0.13 0.44 -0.58 0.33 -0.23 -6.43 -3.31 -0.86 0.81 -0.57 -0.36
- - - 3.98 - - - - - - 3.36 - - - - - - - - - - - - - - -
-0.0 0.17 0.61 1.5 0.5 -1.06 -1.16 -0.31 -0.26 1.23 1.52 1.2 0.12 -1.05 1.85 -1.76 0.18 -4.49 -2.57 -2.69 -4.34 -2.61 -2.48 - -1.3 -1.88
1.32 -0.25 -0.55 2.28 0.09 -1.54 -0.89 1.03 0.89 0.82 1.18 0.16 0.43 -1.77 -1.64 -2.57 -3.58 -0.16 -2.22 -1.78 -3.24 - -0.12 -1.33 -2.18 -0.2
0.74 0.59 0.66 1.99 1.31 0.24 -0.55 -0.19 -0.61 -0.69 -0.57 -1.09 0.42 -1.67 -2.68 -2.06 -2.96 -1.65 -1.56 -1.72 -0.53 1.53 -0.5 -1.6 -0.16 -0.04
0.86 0.21 0.62 0.75 0.41 0.15 0.02 0.06 -0.45 -0.3 0.15 0.19 0.68 -0.39 1.17 0.08 -0.76 -0.5 -0.47 -0.92 -1.42 -1.23 -0.84 -0.93 -0.55 -0.43
0.21 0.35 -1.63 1.54 0.83 - - 0.65 0.78 0.09 -1.7 0.28 1.27 0.2 -0.02 0.52 -0.07 - 0.45 - -1.24 1.51 - - 0.16 -
0.17 -0.57 - 1.8 -0.92 -0.57 0.39 0.3 -0.69 0.11 0.78 2.09 -0.38 -1.41 - - 0.92 - 1.35 -0.9 1.22 - - -0.21 - -
-0.13 -0.84 - 3.49 -0.79 - 0.81 - - -1.1 -0.97 1.43 2.27 - - - 1.05 - - - -1.42 - - - - -
2.2 - - 2.58 - - - - - - 2.43 - - - - - 2.48 - 2.15 - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - -
0.92 -0.17 -0.25 1.01 1.49 -0.29 -0.85 0.73 1.48 0.54 0.65 1.0 -0.91 -1.11 -1.4 -0.56 -2.27 -0.35 -1.18 -2.4 -2.25 -1.68 -1.12 -1.42 -0.26 -0.24
-0.39 -1.31 -3.07 0.89 1.03 0.65 1.4 0.9 0.93 0.22 0.71 1.07 0.89 -0.89 -1.97 -0.91 -1.67 0.81 -1.78 -1.21 -3.25 -4.33 -0.01 -2.0 -1.14 -3.04
- - - - - - - - - - - - - - - - - - - - - - - - - -
- - - 4.07 - 1.77 - - - 1.82 - - - - - - - - - - - - - - 1.2 -
1.12 0.48 -0.07 0.85 0.97 0.77 0.05 0.95 1.14 0.67 1.01 0.3 0.78 -2.97 -2.41 -2.05 -3.02 -1.79 -1.95 -2.84 -3.75 -2.54 0.12 -2.61 -0.05 -1.09
- 1.59 -0.13 - 2.38 - 1.9 0.99 - - 0.84 2.55 0.3 - - - - - - - - 1.2 - - - -
- - - 3.89 2.41 - - - - - - - - 1.64 - - - 1.48 - - - - - - - -
0.4 -0.23 0.34 0.53 0.29 0.03 0.43 0.43 0.32 0.06 0.55 0.13 -0.03 -0.18 -0.08 -0.54 -0.18 -0.65 0.14 -0.42 -3.86 0.65 -0.67 -1.2 -0.43 0.02
- - - - - - - - - - - - - - - - - - - - - - - - - -
1.15 0.36 -0.37 1.63 0.86 -0.17 0.43 1.34 0.06 -1.09 -0.24 -0.27 0.35 -2.06 -2.5 -3.09 -2.11 -0.53 -0.22 -1.27 -3.32 -3.03 -1.74 -0.37 1.12 0.48
2.06 0.5 0.73 2.3 -0.02 1.38 -1.07 0.86 1.47 -0.18 0.18 0.02 1.12 - - - - - - - - - - - - -
-0.47 -0.4 0.33 -0.16 0.33 1.05 0.05 0.5 0.82 0.19 1.6 0.25 -1.8 -0.38 -0.27 -0.87 0.05 0.39 0.14 -0.4 -3.79 - -0.75 -1.37 -0.78 0.24
-1.2 -0.94 -0.96 2.01 -0.14 0.99 1.19 0.33 -1.06 -0.26 0.38 2.43 -0.75 - - - - -0.54 - - 1.15 -0.44 -0.85 - - 0.35
0.84 -2.98 - 1.38 0.05 - -1.45 1.33 0.79 -0.06 1.59 -0.87 -0.71 -3.14 -1.06 0.13 -2.58 0.16 1.26 - -1.96 -1.81 1.23 -1.07 -0.4 0.29
- - - 3.94 - - - - - - - - - - - - - - - - 3.42 - - - - -
-0.27 -0.76 -2.33 -0.24 0.46 0.27 1.18 0.81 1.03 0.86 0.97 0.24 -0.14 -1.29 -0.98 -1.94 -1.4 0.79 0.59 -0.57 -2.27 -0.46 -0.58 -0.24 -0.5 -1.28
1.01 -1.18 - 0.95 1.57 1.1 0.86 1.01 0.16 1.5 1.88 0.67 0.24 -2.02 - -1.29 - -2.18 - - -0.6 - -2.09 - -2.04 -1.93
1.05 -0.4 -1.55 0.75 1.25 0.72 1.01 1.44 1.88 1.05 0.78 -1.25 -1.26 - - -3.52 - -0.33 -1.12 -1.96 - -3.92 -0.96 -2.06 0.39 -1.42
- 3.25 3.0 3.08 - - - - - - - - - - - - - - - - - - - - - -
- - - 3.86 - - - - - - - - - - 3.53 - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - -
1.84 0.59 - 0.42 0.24 1.35 - 0.23 0.33 0.25 0.27 1.43 0.77 2.03 - - - -0.2 - - - - - - - 0.76
- - - 4.7 - - - - - - - - - - - - - - - - - - - - - -
-0.58 - - 1.35 0.77 1.86 - 2.26 2.09 1.21 1.27 - 0.16 - -0.53 - - - -0.63 - - -0.53 - - -0.95 -
-2.88 -3.89 -0.56 1.22 0.24 1.06 1.2 1.54 0.67 -0.14 0.79 0.08 -3.01 -1.48 -1.06 -1.29 -1.21 -0.61 0.54 -0.52 -1.83 0.75 -0.06 -2.87 -0.21 -1.03
0.15 -1.86 -1.83 -1.75 -0.28 0.33 0.62 -0.13 0.87 0.2 0.71 0.65 0.67 0.72 -0.36 0.62 -0.02 -0.5 -0.75 -0.33 -2.06 -3.48 -0.26 1.16 0.04 -1.9
0.59 -2.0 - 1.17 0.17 - -2.45 0.27 -1.29 0.42 1.09 0.28 -0.38 -0.76 -2.91 -1.14 -2.89 -0.86 0.34 -4.07 -0.17 0.37 -1.26 1.65 0.43 1.75
- - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - -
-0.31 -0.52 -1.08 0.85 0.65 0.79 0.18 1.56 0.76 -1.84 1.21 0.67 -0.1 -3.33 -2.83 -1.18 -2.77 -0.52 0.69 -1.11 -1.41 -1.03 0.61 -2.84 -0.78 0.4
0.09 0.99 1.31 2.25 1.34 0.26 0.14 -0.59 -1.87 -2.6 -0.71 -0.61 -0.68 -4.1 - -3.37 - -2.93 - -0.72 -0.26 -1.23 0.19 1.15 0.97 -1.22
0.72 -1.27 0.58 -0.12 -0.06 -0.21 -0.1 0.53 0.82 1.28 0.99 0.16 -0.09 -0.93 -1.76 -1.25 -3.28 -0.76 0.84 -2.48 - 1.52 -0.55 -2.65 -0.41 -0.5
0.75 - - 2.69 - 0.51 - - - 1.51 - 0.7 - - - 1.5 - 0.02 0.26 1.86 - 0.22 1.1 - - -
0.23 -0.36 -0.51 0.14 0.18 -0.23 0.09 0.27 0.03 0.32 0.62 0.4 0.09 0.16 -0.0 0.29 -0.46 0.21 0.16 -1.02 -0.85 -0.1 -0.3 0.23 -1.15 0.06

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.