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Heatmap: Cluster_105 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
-0.49 -2.36 -1.45 -0.45 0.58 0.81 1.36 1.43 1.2 0.75 0.95 0.03 -0.45 0.38 -2.9 -0.55 0.59 0.15 -0.2 -0.31 -4.92 -3.83 -6.73 -3.58 -0.16 -1.67
0.58 0.53 -1.13 -1.19 -0.4 0.23 0.85 0.86 0.74 0.51 0.21 -0.12 0.41 -0.31 -0.2 -0.84 0.29 0.32 0.17 0.26 -5.83 -0.69 -1.89 -0.88 0.23 -1.03
-1.16 -1.52 -0.75 -0.48 0.11 0.49 0.75 0.69 0.64 0.85 0.53 0.12 -1.05 1.08 -1.3 -0.05 -0.19 0.2 0.12 0.62 -5.89 -1.16 -0.94 -0.3 0.12 -0.46
0.34 0.14 -0.03 -0.32 -0.78 -0.56 0.28 0.36 0.28 0.69 0.53 0.38 0.03 0.45 0.09 -0.02 -0.25 0.39 0.27 0.23 -7.52 -1.1 -0.75 -1.05 0.0 0.01
-0.44 -0.52 -0.91 -0.26 0.01 0.51 1.12 1.24 1.25 1.12 0.58 -0.05 -0.68 -2.55 -1.68 -0.49 -0.09 0.91 0.4 0.78 -5.22 -2.42 -1.58 -3.5 -0.67 -1.82
-3.81 -3.02 -1.77 -0.87 0.8 2.12 2.02 1.22 1.07 0.45 -0.18 -1.4 -3.07 -0.18 -0.8 -2.89 -0.64 -0.66 -0.78 -0.04 0.1 -0.88 -1.85 -1.36 -1.05 -1.12
0.48 2.12 0.91 2.21 1.69 1.28 0.11 0.52 0.49 -0.07 0.02 -0.45 0.34 - - - - - - - - - - - - -2.06
-0.02 -1.08 -2.38 -1.11 -0.46 0.48 1.05 1.04 1.24 0.81 0.13 -0.98 -0.18 0.48 -0.5 -1.0 0.34 0.16 0.87 -0.13 -5.76 -2.67 -0.59 -1.95 0.53 -0.35
0.14 -1.09 -1.44 -1.59 -1.05 0.32 1.15 0.9 0.98 0.69 0.38 -0.6 -0.17 0.53 -0.75 -0.86 0.2 1.07 0.82 0.25 -4.71 -1.78 -1.49 -2.54 0.21 -0.53
1.37 -0.14 -2.51 - -1.91 0.81 1.7 1.83 1.3 0.9 0.03 -0.19 0.96 -1.43 -1.38 -1.99 -1.41 -0.37 -2.13 -0.59 -3.5 -2.42 -0.35 -2.1 -0.66 -1.43
-1.42 -0.08 -1.3 -2.03 -0.64 -1.91 1.65 2.25 1.73 1.95 1.73 0.06 0.53 -3.63 - -1.57 - -0.33 0.07 - - - - - - -
0.03 -0.62 -0.4 -0.38 0.1 0.08 0.47 0.42 0.35 0.14 0.34 0.55 0.42 0.18 -0.24 0.03 0.02 0.32 0.21 0.23 -2.34 -2.54 -0.28 -0.63 0.18 -0.08
-0.51 -0.92 -0.37 0.13 0.46 1.03 1.46 1.27 1.16 0.74 0.31 -0.04 -0.46 -1.5 -1.14 -0.91 -0.38 -0.37 -0.39 -0.03 -3.04 -0.03 -1.16 -1.49 -0.9 -1.29
0.38 -0.96 -1.28 -0.32 0.11 0.06 0.77 1.45 1.35 1.5 0.87 0.28 0.37 -2.09 -1.39 -1.21 -0.65 -0.03 0.25 -0.32 -3.91 -5.52 -1.69 -1.02 -0.68 -0.89
-0.11 -0.64 0.11 -0.17 0.33 0.33 1.05 0.82 0.76 0.47 0.21 -0.01 0.01 -0.96 -0.56 -0.05 0.24 0.41 0.27 0.28 -2.83 -1.31 -1.18 -1.41 -0.62 -0.34
-0.18 -0.9 -0.99 -0.31 0.05 0.25 1.23 1.22 1.3 1.01 0.53 -0.15 -0.69 -1.18 -1.11 -1.63 0.35 0.76 -0.07 0.24 -3.93 -0.68 -1.74 -1.19 -0.79 -0.76
-2.32 -1.58 -0.2 -0.24 -0.03 0.58 0.93 0.92 1.0 0.84 0.41 0.03 -1.66 1.12 -1.05 0.42 -0.17 0.19 -0.05 0.37 -8.89 -2.82 -2.94 -2.13 0.46 -0.21
-2.61 0.58 0.72 0.49 1.56 1.98 2.23 1.73 1.58 0.59 0.01 -0.95 -2.08 -9.26 -8.7 - - -8.77 -6.9 -8.83 -6.27 -8.86 - -5.2 -4.32 -9.11
1.42 0.46 0.37 1.27 1.71 1.51 0.88 0.76 0.75 0.35 0.28 0.67 0.82 - - - - -2.8 - - -4.07 -1.94 -3.79 - -2.78 -1.34
0.05 0.36 -0.34 -0.74 -0.51 -0.23 0.69 0.82 0.68 0.69 0.35 -0.13 -0.14 -0.82 -0.44 -1.16 0.29 0.38 -0.36 0.17 -4.37 -0.24 -0.5 -0.36 0.56 0.03
0.19 0.46 -0.22 -0.62 -0.37 0.26 0.78 0.87 0.83 0.73 0.43 0.04 0.08 -0.96 -0.4 -1.16 0.22 -0.17 -0.24 0.13 -4.62 -0.42 -1.1 -0.75 0.26 -0.27
-0.49 0.93 1.15 1.05 1.46 1.58 1.35 1.36 0.55 1.15 1.01 0.55 -0.66 - - - - - - -1.88 -2.54 - - - - -
0.09 -0.42 -0.32 -0.19 0.04 0.38 0.78 0.81 0.59 0.57 0.4 0.08 0.33 -0.66 0.6 -0.3 -0.09 0.31 0.05 0.3 -1.71 -1.69 -1.34 -1.18 -0.71 -0.72
-0.69 -0.06 -0.52 -0.68 0.09 0.8 1.41 1.16 1.18 0.83 0.26 -0.47 -1.06 -0.5 -0.12 -0.37 0.07 0.6 0.22 0.28 -7.16 -4.5 -1.14 -1.42 -1.03 -2.04
0.5 1.43 -1.38 1.4 1.19 0.76 0.42 0.4 1.84 0.63 0.86 1.04 -0.49 - -1.54 - - -1.53 -2.45 -0.72 - -0.18 - - -2.47 -
-0.21 -0.46 -0.45 0.16 -0.02 -0.18 1.11 1.34 1.16 0.99 -0.17 -0.6 0.62 -0.8 -0.2 -0.89 0.05 -0.39 -0.64 -0.21 -4.58 -3.53 -1.66 -1.63 0.74 -0.06
-0.2 -0.5 -0.94 -0.61 -0.01 0.88 1.18 0.81 0.88 0.33 -0.13 -0.57 -0.71 1.16 -0.35 0.44 0.03 0.26 0.23 0.3 -3.14 -1.81 -0.92 -1.08 -1.49 -1.59
0.32 -0.47 -1.38 -1.36 -0.55 0.23 1.08 1.08 0.87 0.71 0.34 -0.35 -0.12 0.46 -0.07 -0.28 -0.24 -0.07 -0.34 -0.15 -4.72 -1.59 -0.11 -0.79 0.42 -0.16
-3.38 -1.96 -0.64 -0.2 0.66 1.58 2.0 1.56 1.36 0.77 -0.34 -1.48 -2.69 -1.28 -0.59 -1.18 -0.01 0.1 -0.1 0.51 -7.66 -2.63 -3.75 -2.73 -1.06 -2.13
0.63 -0.78 -1.31 -1.68 -0.21 0.8 1.51 1.62 1.29 1.06 1.0 0.42 0.66 -0.06 -1.3 -1.25 -0.56 -0.34 -0.55 -0.57 - - -6.01 -2.34 -2.73 -2.23
0.41 -0.27 -0.27 -0.25 -0.15 -0.33 0.08 0.12 0.13 0.3 0.28 0.43 0.41 0.07 -0.36 -0.19 0.17 0.37 0.16 0.32 -4.66 -0.46 -0.92 -0.34 0.45 0.24
-2.34 -2.6 -1.4 -0.47 0.79 1.42 1.6 1.61 1.5 1.14 0.47 -0.68 -2.76 -1.26 -1.14 -0.86 -0.7 -0.15 -0.11 -0.07 -5.09 -0.24 -3.34 -2.54 -0.83 -1.58
-0.75 -1.66 -1.77 -0.58 0.24 1.59 2.05 1.62 1.3 1.55 1.2 -0.09 0.35 -1.62 -1.18 -3.01 -1.3 -1.94 -1.26 -4.68 -5.32 -3.29 -5.02 -2.73 -1.15 -4.78
-1.31 -1.37 -4.33 -3.12 0.06 2.39 2.96 2.1 1.24 -0.3 -0.6 -1.17 -1.48 -2.13 -1.96 -1.93 -2.31 -1.5 -1.18 -1.9 -6.43 - -4.52 - - -
-0.37 -2.7 -0.74 -2.23 -2.12 0.68 1.41 2.2 2.22 1.74 1.58 -0.09 -1.57 -4.05 -4.14 -0.59 -2.07 -0.31 -0.86 -1.53 - -4.29 - - - -2.81
1.16 -0.15 -0.31 -0.52 -1.02 -0.32 0.79 1.2 0.7 0.77 0.67 0.05 0.53 -4.06 -2.82 -3.22 -1.06 0.35 -0.31 -0.18 -2.51 -2.2 0.39 -0.25 0.6 -0.25
1.5 -0.38 -0.72 -0.33 -0.61 -0.17 0.69 1.43 0.95 1.0 0.85 0.44 1.04 -5.26 -3.02 -5.13 -2.2 -0.48 -0.93 -0.97 -3.77 -3.39 0.09 -0.15 -0.13 -0.3
-0.44 -0.93 -0.47 -1.61 -0.65 0.11 1.36 2.4 1.68 1.21 1.3 0.24 0.74 -3.15 -1.38 -1.94 -4.48 -0.44 -0.08 -1.99 - -2.19 - -3.15 -4.09 -2.56
-0.01 -0.11 0.03 0.11 0.22 0.33 0.55 0.63 0.38 0.38 0.1 -0.23 -0.07 0.65 -0.62 0.28 -0.01 0.43 -0.11 0.35 -6.79 -3.75 -1.36 -1.15 0.38 -0.21
0.07 -1.03 -2.28 -1.26 -2.38 -1.27 1.57 2.46 2.06 2.16 1.01 1.28 0.3 - - - - -2.03 -2.29 - - - - - - -
0.69 0.37 -0.49 -0.5 -0.41 0.08 1.0 1.19 0.83 0.43 0.18 -0.4 -0.18 -1.2 -0.82 -1.95 0.09 0.39 0.21 0.12 -2.49 -1.44 -0.65 -0.4 0.23 -0.55
-3.01 -3.98 -3.39 -2.12 -0.53 0.83 1.66 0.9 1.29 0.43 -0.57 -1.49 -2.79 1.55 0.48 1.2 0.5 0.3 -0.34 -0.12 -7.78 -2.73 -3.97 -2.46 -0.12 -0.5
-0.84 -1.83 -1.97 -1.72 -0.8 0.64 1.79 1.2 1.8 0.66 -0.45 -1.05 -1.11 0.49 0.08 -0.09 0.43 0.1 0.19 0.43 -4.17 -1.93 -2.56 -2.21 -0.69 -1.5
1.17 0.3 -0.54 -2.12 -1.3 -0.01 0.98 2.16 1.99 1.51 1.11 0.71 0.57 -2.37 - - - -0.24 - -0.7 - - - - - -
-3.91 -0.65 -2.48 -2.65 0.06 1.96 2.68 2.15 1.14 1.26 -0.17 -0.04 -0.92 - - -3.62 -2.51 -1.68 -0.71 -1.92 -3.27 -2.32 - -3.0 -4.22 -2.06
0.3 -0.16 0.02 0.51 0.21 0.2 0.55 1.17 1.13 0.75 0.62 0.06 0.32 -1.39 -0.96 -1.16 -1.26 -0.38 -0.54 -0.23 -1.12 -0.86 -1.15 -0.83 -0.08 -0.57
1.66 0.98 -0.51 1.65 0.08 0.63 0.5 1.44 -0.49 1.19 1.66 1.59 0.16 - - - - - - - - - - - - -
-0.62 -0.6 -0.37 0.37 0.2 0.17 1.2 1.41 1.36 1.49 0.91 1.02 -1.66 -0.82 -0.44 -0.92 -0.98 -0.63 -0.61 -0.3 -3.43 -2.79 -2.19 -2.94 -2.11 -0.91
-1.19 -0.54 -0.28 0.24 0.19 0.17 0.78 1.34 1.49 1.12 0.62 0.36 -0.36 -0.23 -0.6 -0.12 -0.31 -0.43 -0.73 0.08 -3.8 -1.85 -1.75 -1.5 -0.85 -0.75
-0.38 -0.16 -1.17 -0.51 0.67 1.41 1.75 2.01 1.59 1.39 1.04 -0.08 -0.04 -2.22 -2.13 -2.07 - -0.95 -3.99 -2.98 -2.08 - - - -1.69 -
-0.17 -0.02 -0.85 -1.28 -1.12 -0.45 0.93 1.32 1.03 1.14 0.88 0.4 -0.05 0.78 -2.13 -0.09 -0.34 -0.08 -0.75 -0.07 -5.07 -2.69 -0.68 -0.87 0.19 -0.88
0.07 0.06 -0.7 -1.23 -0.91 0.1 0.96 1.31 1.21 1.14 0.87 0.37 0.06 0.56 -1.9 -0.19 -0.48 -0.49 -0.58 -0.15 -5.5 -3.12 -1.01 -1.16 -0.09 -0.97
-0.36 -0.2 -0.26 -0.35 -0.03 0.39 0.87 0.9 0.96 0.86 0.59 0.28 -0.31 0.34 -1.41 -0.26 -0.31 0.33 0.06 0.47 -5.93 -1.62 -1.48 -1.38 -0.33 -0.7
0.53 -0.56 -0.57 -0.59 -0.33 0.17 0.72 0.71 0.56 0.92 0.53 0.1 0.44 0.38 -0.89 0.28 0.13 0.49 0.11 0.46 -7.45 -3.77 -3.68 -2.83 0.18 -0.62
0.03 -0.81 -0.64 -0.46 -0.25 -0.09 0.48 0.44 0.55 1.0 0.67 0.25 0.16 0.51 -0.74 0.37 0.13 0.61 0.22 0.27 -7.3 -3.45 -3.27 -2.98 0.49 0.12
0.42 0.88 0.46 -0.06 -0.2 0.19 0.77 1.0 0.7 0.07 -0.5 -0.89 0.07 0.89 -0.86 -0.2 -0.38 -0.16 -0.37 -0.06 -5.47 -2.61 -1.34 -2.05 0.45 -0.08
-1.23 -2.8 -2.84 -0.93 -0.27 -0.44 0.78 1.34 1.41 1.61 1.3 0.4 -0.89 -1.98 -1.16 -1.19 -0.34 0.42 0.4 0.37 -3.25 -5.37 -0.79 -0.7 -0.05 -0.42
-0.5 -0.94 -0.87 -0.25 0.35 0.71 1.25 1.18 1.11 0.97 0.57 -0.04 -0.56 -1.73 -1.54 -1.75 -0.28 0.3 0.27 0.29 -6.73 -0.31 -0.91 -1.23 -0.15 -1.16

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.