Sequence Description Alias PCC hrr AT4G03280 photosynthetic electron transfer C PGR1, PETC 0.9086107333726245 6 AT4G32260 ATPase, F0 complex, subunit B/B', bacterial/chloroplast 0.8844108538243469 7 AT1G45474 photosystem I light harvesting complex gene 5 LHCA5 0.8715298440922608 34 AT1G06680 photosystem II subunit P-1 OE23, OEE2, PSBP-1, PSII-P 0.8696462785971188 24 AT1G71500 Rieske (2Fe-2S) domain-containing protein 0.8658237413383416 27 AT1G20340 Cupredoxin superfamily protein DRT112, PETE2 0.8654045627059009 24 AT5G66570 PS II oxygen-evolving complex 1 OEE33, PSBO1, OEE1, MSP-1, PSBO-1, OE33 0.8633783193757186 17 AT3G63140 chloroplast stem-loop binding protein of 41 kDa CSP41A 0.8567104195651412 37 AT3G10060 FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0.8549406315592981 22 AT5G16710 dehydroascorbate reductase 1 DHAR3 0.853818275315208 15 AT3G54050 high cyclic electron flow 1 HCEF1 0.8507949349129627 70 AT2G01110 Sec-independent periplasmic protein translocase PGA2, APG2, TATC, UNE3 0.8480496790138973 12 AT1G65230 Uncharacterized conserved protein (DUF2358) 0.8463114795741709 30 AT5G35630 glutamine synthetase 2 GS2, ATGSL1, GLN2 0.8454750796611564 32 AT3G23700 Nucleic acid-binding proteins superfamily 0.8428701130926413 15 AT1G44920 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3054 (InterPro:IPR021414); Has 246 Blast hits to 246 proteins in 119 species: Archae - 14; Bacteria - 181; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). 0.8419295299077466 16 AT5G66190 ferredoxin-NADP(+)-oxidoreductase 1 FNR1, ATLFNR1 0.839902226343817 94 AT4G39710 FK506-binding protein 16-2 FKBP16-2 0.8390334891037939 18 AT1G03680 thioredoxin M-type 1 ATHM1, THM1, TRX-M1, ATM1 0.83859464842594 19 AT5G09660 peroxisomal NAD-malate dehydrogenase 2 PMDH2 0.8375337081896578 49 AT3G12780 phosphoglycerate kinase 1 PGK1 0.8359704340328409 58 AT1G54780 thylakoid lumen 18.3 kDa protein TLP18.3 0.8359342491684457 32 AT5G07020 proline-rich family protein 0.8324866870295141 73 AT3G56650 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein 0.8318130583020101 25 AT1G73655 FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0.8317758359656431 26 AT1G31330 photosystem I subunit F PSAF 0.8309697887339055 27 AT4G25080 magnesium-protoporphyrin IX methyltransferase CHLM 0.8288771276576935 28 AT3G14415 Aldolase-type TIM barrel family protein 0.8276447546692153 29 AT3G15360 thioredoxin M-type 4 ATHM4, TRX-M4, ATM4 0.8234954788783135 31 AT3G46780 plastid transcriptionally active 16 PTAC16 0.8232727624219689 83 AT4G31530 NAD(P)-binding Rossmann-fold superfamily protein 0.8209076398689865 33 AT5G01530 light harvesting complex photosystem II LHCB4.1 0.8185533244354688 37 AT2G21280 NAD(P)-binding Rossmann-fold superfamily protein ATSULA, GC1, SULA 0.8176610140389914 47 AT1G20810 FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0.8175350303295214 40 AT3G14420 Aldolase-type TIM barrel family protein 0.8173521713387919 40 AT3G63490 Ribosomal protein L1p/L10e family 0.8172595268168031 41 AT1G65260 plastid transcriptionally active 4 PTAC4, VIPP1 0.8163175329115561 42 AT1G32060 phosphoribulokinase PRK 0.8139055305450223 65 AT3G11630 Thioredoxin superfamily protein 0.8122127839056522 54 AT5G57930 Arabidopsis thaliana protein of unknown function (DUF794) emb1629, APO2 0.8112802939133923 48 AT2G30170 Protein phosphatase 2C family protein 0.8109079584914959 49 AT5G55710 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: Uncharacterised conserved protein ycf60 (TAIR:AT2G47840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). 0.8102087789007411 50 AT5G03880 Thioredoxin family protein 0.8085091134715561 52 AT3G51510 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 42 Blast hits to 42 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). 0.8083236233444675 53 AT1G04420 NAD(P)-linked oxidoreductase superfamily protein 0.80751916858509 60 AT3G56010 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 25 Blast hits to 25 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). 0.8053752955076877 66 AT1G50320 thioredoxin X THX, ATHX, ATX 0.8052504596760631 58 AT4G12800 photosystem I subunit l PSAL 0.8052156998319617 59 AT5G23120 photosystem II stability/assembly factor, chloroplast (HCF136) HCF136 0.8028657806421231 84 AT3G02730 thioredoxin F-type 1 ATF1, TRXF1 0.8004184883792815 82 AT3G16140 photosystem I subunit H-1 PSAH-1 0.8000138910344623 64 AT5G27290 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54680.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). 0.7998356105401572 65 AT4G22890 PGR5-LIKE A PGR5-LIKE A 0.7996412829422029 80 AT3G12345 unknown protein; LOCATED IN: chloroplast; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). 0.7994925189756106 77 AT4G02770 photosystem I subunit D-1 PSAD-1 0.7992472312476644 68 AT1G77490 thylakoidal ascorbate peroxidase TAPX 0.7984485511856324 79 AT1G74970 ribosomal protein S9 TWN3, RPS9 0.7978645194463493 70 AT3G26650 glyceraldehyde 3-phosphate dehydrogenase A subunit GAPA-1, GAPA 0.7967550327532245 74 AT2G26340 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 38 Blast hits to 38 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). 0.7961522591630161 72 AT2G27680 NAD(P)-linked oxidoreductase superfamily protein 0.794084695981712 95 AT3G61470 photosystem I light harvesting complex gene 2 LHCA2 0.7907541606758753 77 AT2G48070 resistance to phytophthora 1 RPH1 0.7844577024085738 96 AT1G22700 Tetratricopeptide repeat (TPR)-like superfamily protein 0.7838004278042665 86 AT4G10340 light harvesting complex of photosystem II 5 LHCB5 0.7826615586518998 87 AT5G21920 YGGT family protein YLMG2, ATYLMG2 0.7814259440598477 90 AT1G67090 ribulose bisphosphate carboxylase small chain 1A RBCS1A 0.7772869359291666 92 AT5G51020 crumpled leaf CRL 0.7760637013193371 93 AT5G13410 FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0.7754469495930314 94 AT1G35340 ATP-dependent protease La (LON) domain protein 0.7738899160383703 96 AT5G14320 Ribosomal protein S13/S18 family 0.7725038771357597 98