Sequence Description Alias PCC hrr AT5G66570 PS II oxygen-evolving complex 1 OEE33, PSBO1, OEE1, MSP-1, PSBO-1, OE33 0.9531353593077802 1 AT1G31330 photosystem I subunit F PSAF 0.9373428105351951 2 AT4G12800 photosystem I subunit l PSAL 0.9249022525387188 4 AT1G54780 thylakoid lumen 18.3 kDa protein TLP18.3 0.9230162296999852 4 AT4G02770 photosystem I subunit D-1 PSAD-1 0.9164903639868789 5 AT1G20340 Cupredoxin superfamily protein DRT112, PETE2 0.9107968823763827 6 AT3G61470 photosystem I light harvesting complex gene 2 LHCA2 0.9077652709665996 7 AT4G10340 light harvesting complex of photosystem II 5 LHCB5 0.906902082738195 8 AT5G01530 light harvesting complex photosystem II LHCB4.1 0.9023615877097811 9 AT3G46780 plastid transcriptionally active 16 PTAC16 0.9014906010778908 10 AT2G46820 photosystem I P subunit PTAC8, TMP14, PSI-P, PSAP 0.8979825574963984 11 AT1G61520 photosystem I light harvesting complex gene 3 LHCA3 0.8946279582475479 12 AT3G63140 chloroplast stem-loop binding protein of 41 kDa CSP41A 0.8937723503806623 15 AT3G16140 photosystem I subunit H-1 PSAH-1 0.8862692107286076 14 AT5G54270 light-harvesting chlorophyll B-binding protein 3 LHCB3*1, LHCB3 0.8859911825124617 15 AT4G32260 ATPase, F0 complex, subunit B/B', bacterial/chloroplast 0.8858281435290053 16 AT4G03280 photosynthetic electron transfer C PGR1, PETC 0.882411963420422 17 AT1G55670 photosystem I subunit G PSAG 0.8822371632623565 18 AT3G10060 FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0.8782540076985369 19 AT1G15820 light harvesting complex photosystem II subunit 6 CP24, LHCB6 0.8770073019320491 20 AT3G47470 light-harvesting chlorophyll-protein complex I subunit A4 CAB4, LHCA4 0.8766702477821086 21 AT2G30570 photosystem II reaction center W PSBW 0.8762528236150978 22 AT3G54890 photosystem I light harvesting complex gene 1 LHCA1 0.8735486275424472 23 AT1G67700 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 49 Blast hits to 49 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). 0.8696462785971188 24 AT4G22890 PGR5-LIKE A PGR5-LIKE A 0.863511874325473 25 AT4G28750 Photosystem I reaction centre subunit IV / PsaE protein PSAE-1 0.8603728054035161 26 AT5G09660 peroxisomal NAD-malate dehydrogenase 2 PMDH2 0.8583428681221413 31 AT1G52230 photosystem I subunit H2 PSAH2, PSI-H, PSAH-2 0.8521243382552194 28 AT1G45474 photosystem I light harvesting complex gene 5 LHCA5 0.8508653348959733 58 AT5G66190 ferredoxin-NADP(+)-oxidoreductase 1 FNR1, ATLFNR1 0.8461658393109797 82 AT2G01110 Sec-independent periplasmic protein translocase PGA2, APG2, TATC, UNE3 0.8448828165180479 31 AT5G07020 proline-rich family protein 0.8443709262550388 51 AT5G16710 dehydroascorbate reductase 1 DHAR3 0.8442733447069671 33 AT2G06520 photosystem II subunit X PSBX 0.8425989922201572 34 AT3G54050 high cyclic electron flow 1 HCEF1 0.8420415932526765 90 AT4G09010 ascorbate peroxidase 4 APX4, TL29 0.8391827946720953 54 AT1G65230 Uncharacterized conserved protein (DUF2358) 0.8379684244333884 41 AT3G12345 unknown protein; LOCATED IN: chloroplast; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). 0.8369836975281862 38 AT1G12900 glyceraldehyde 3-phosphate dehydrogenase A subunit 2 GAPA-2 0.833027318416867 78 AT4G25080 magnesium-protoporphyrin IX methyltransferase CHLM 0.8311312108214111 40 AT3G15360 thioredoxin M-type 4 ATHM4, TRX-M4, ATM4 0.8310393002680491 41 AT4G21280 photosystem II subunit QA PSBQA, PSBQ-1, PSBQ 0.8293016535144653 74 AT1G09340 chloroplast RNA binding CRB, HIP1.3, CSP41B 0.8287020568845943 88 AT3G02730 thioredoxin F-type 1 ATF1, TRXF1 0.8280411665382069 44 AT3G12780 phosphoglycerate kinase 1 PGK1 0.8265757397957999 75 AT1G32060 phosphoribulokinase PRK 0.8237432808249399 56 AT3G50820 photosystem II subunit O-2 OEC33, PSBO-2, PSBO2 0.8214961444612493 48 AT1G71500 Rieske (2Fe-2S) domain-containing protein 0.8203674011591271 97 AT4G04640 ATPase, F1 complex, gamma subunit protein ATPC1 0.8192998852447927 92 AT1G52510 alpha/beta-Hydrolases superfamily protein 0.8186485348909123 51 AT1G03600 photosystem II family protein PSB27 0.8178893775512792 52 AT2G39730 rubisco activase RCA 0.8167943467666721 53 AT5G35630 glutamine synthetase 2 GS2, ATGSL1, GLN2 0.8165199941968978 61 AT2G05070 photosystem II light harvesting complex gene 2.2 LHCB2.2, LHCB2 0.8157795469570098 55 AT4G35250 NAD(P)-binding Rossmann-fold superfamily protein 0.8152812710223123 56 AT1G03680 thioredoxin M-type 1 ATHM1, THM1, TRX-M1, ATM1 0.8139423643292898 57 AT4G37930 serine transhydroxymethyltransferase 1 STM, SHM1, SHMT1 0.812663277912606 77 AT3G08940 light harvesting complex photosystem II LHCB4.2 0.8112531898617066 59 AT3G14420 Aldolase-type TIM barrel family protein 0.8083029584205704 60 AT1G18060 unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 74 Blast hits to 74 proteins in 29 species: Archae - 0; Bacteria - 19; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). 0.8081484714161641 73 AT1G75460 ATP-dependent protease La (LON) domain protein 0.8080953152501711 62 AT5G38410 Ribulose bisphosphate carboxylase (small chain) family protein 0.8055450778129564 65 AT2G05100 photosystem II light harvesting complex gene 2.1 LHCB2.1, LHCB2 0.8054785286266889 66 AT1G22850 SNARE associated Golgi protein family 0.8041337946875797 69 AT1G77490 thylakoidal ascorbate peroxidase TAPX 0.8040498724042825 70 AT5G16400 thioredoxin F2 TRXF2, ATF2 0.8009046065794143 73 AT5G46110 Glucose-6-phosphate/phosphate translocator-related TPT, APE2 0.7983095614052038 74 AT4G38970 fructose-bisphosphate aldolase 2 FBA2 0.7973179946756982 76 AT1G79040 photosystem II subunit R PSBR 0.7964163649793276 77 AT5G03880 Thioredoxin family protein 0.7946835724352218 79 AT5G37360 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). 0.794568794517408 80 AT3G11630 Thioredoxin superfamily protein 0.7941080868774953 81 AT1G50320 thioredoxin X THX, ATHX, ATX 0.794072890057089 82 AT3G56940 dicarboxylate diiron protein, putative (Crd1) ACSF, CHL27, CRD1 0.7938320647805254 83 AT3G51510 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 42 Blast hits to 42 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). 0.7926755667510833 84 AT5G59250 Major facilitator superfamily protein 0.7906073734666259 86 AT1G67090 ribulose bisphosphate carboxylase small chain 1A RBCS1A 0.7887182871531241 87 AT1G30380 photosystem I subunit K PSAK 0.7857862302102265 89 AT3G63410 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein IEP37, E37, APG1, VTE3 0.7835843251977871 92 AT2G21330 fructose-bisphosphate aldolase 1 FBA1 0.7798459865709249 97 AT1G51400 Photosystem II 5 kD protein 0.7789352072290082 98 AT4G05180 photosystem II subunit Q-2 PSBQ-2, PSII-Q, PSBQ 0.7781654524573212 99 AT1G08380 photosystem I subunit O PSAO 0.777026333563726 100