Sequence Description Alias PCC hrr AT2G39470 PsbP-like protein 2 PPL2 0.9124934385371525 5 AT2G01590 chlororespiratory reduction 3 CRR3 0.9104337769913399 2 AT5G43750 NAD(P)H dehydrogenase 18 NDH18 0.9057237377100036 14 AT1G11860 Glycine cleavage T-protein family 0.9055628414219674 7 AT1G15980 NDH-dependent cyclic electron flow 1 NDH48, NDF1 0.8982496922103751 14 AT4G09650 ATP synthase delta-subunit gene ATPD 0.896650456545017 6 AT1G12900 glyceraldehyde 3-phosphate dehydrogenase A subunit 2 GAPA-2 0.8954391475883868 14 AT3G46780 plastid transcriptionally active 16 PTAC16 0.8898225070854393 8 AT1G74730 Protein of unknown function (DUF1118) 0.8884096308636308 12 AT3G59780 Rhodanese/Cell cycle control phosphatase superfamily protein 0.8880020024603019 10 AT3G48420 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0.8854827625335084 20 AT3G55800 sedoheptulose-bisphosphatase SBPASE 0.8829135724162464 23 AT5G38520 alpha/beta-Hydrolases superfamily protein 0.8825959433204283 13 AT1G03630 protochlorophyllide oxidoreductase C POR C, PORC 0.8816311915016578 14 AT3G54050 high cyclic electron flow 1 HCEF1 0.8797840172492699 38 AT5G08050 Protein of unknown function (DUF1118) 0.8758777640943516 16 AT4G21280 photosystem II subunit QA PSBQA, PSBQ-1, PSBQ 0.8752744837049222 18 AT5G21430 Chaperone DnaJ-domain superfamily protein 0.8751465808758178 18 AT4G09010 ascorbate peroxidase 4 APX4, TL29 0.8750169608641848 19 AT1G55480 protein containing PDZ domain, a K-box domain, and a TPR region ZKT 0.8716377527639955 27 AT5G36790 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0.8711870004608838 28 AT5G36700 2-phosphoglycolate phosphatase 1 PGLP1, ATPGLP1 0.8711870004608838 28 AT3G55330 PsbP-like protein 1 PPL1 0.8707494483016732 24 AT5G66190 ferredoxin-NADP(+)-oxidoreductase 1 FNR1, ATLFNR1 0.8698583191426411 47 AT4G37925 subunit NDH-M of NAD(P)H:plastoquinone dehydrogenase complex NDH-M 0.867879885800267 25 AT1G75690 DnaJ/Hsp40 cysteine-rich domain superfamily protein 0.8671173284912062 26 AT1G09340 chloroplast RNA binding CRB, HIP1.3, CSP41B 0.8650861289268107 44 AT1G64770 NDH-dependent cyclic electron flow 1 NDH45, NDF2 0.8621706509833484 28 AT1G14150 PsbQ-like 2 PQL1, PQL2 0.8618302991822993 29 AT1G76450 Photosystem II reaction center PsbP family protein 0.8611132037202007 30 AT5G08650 Small GTP-binding protein 0.8609097929162843 31 AT1G51110 Plastid-lipid associated protein PAP / fibrillin family protein 0.8601181805061774 32 AT4G04640 ATPase, F1 complex, gamma subunit protein ATPC1 0.8593948895219709 33 AT2G43560 FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0.858197163372013 37 AT2G21530 SMAD/FHA domain-containing protein 0.8581739297481162 35 AT1G74070 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein 0.8565194432608506 36 AT5G58260 oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor 0.8552849809950039 37 AT3G16250 NDH-dependent cyclic electron flow 1 NDF4 0.8552780049364189 38 AT1G42970 glyceraldehyde-3-phosphate dehydrogenase B subunit GAPB 0.8552720697364122 50 AT1G32080 membrane protein, putative 0.8542928985948037 40 AT1G65230 Uncharacterized conserved protein (DUF2358) 0.8537551986506362 41 AT1G56500 haloacid dehalogenase-like hydrolase family protein 0.8535615089338305 42 AT5G51110 Transcriptional coactivator/pterin dehydratase 0.8534618872793616 43 AT5G45680 FK506-binding protein 13 ATFKBP13, FKBP13 0.8531722600594737 44 AT3G01480 cyclophilin 38 ATCYP38, CYP38 0.8516799842500344 45 AT3G50685 unknown protein; Has 52 Blast hits to 46 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). 0.8505425549801627 46 AT1G45474 photosystem I light harvesting complex gene 5 LHCA5 0.8496033335753553 62 AT3G61870 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 200 Blast hits to 200 proteins in 73 species: Archae - 0; Bacteria - 112; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). 0.846342317685519 48 AT3G50820 photosystem II subunit O-2 OEC33, PSBO-2, PSBO2 0.8462684685816191 49 AT1G77090 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein 0.8418173406416956 50 AT3G18890 NAD(P)-binding Rossmann-fold superfamily protein 0.8413301669845727 51 AT1G70760 inorganic carbon transport protein-related CRR23 0.8410033009139877 52 AT5G38420 Ribulose bisphosphate carboxylase (small chain) family protein 0.8402855279916772 53 AT1G32060 phosphoribulokinase PRK 0.839845027426297 54 AT5G19220 ADP glucose pyrophosphorylase large subunit 1 APL1, ADG2 0.8392414777283999 55 AT1G44575 Chlorophyll A-B binding family protein NPQ4, PSBS 0.8390675935894871 56 AT2G34860 DnaJ/Hsp40 cysteine-rich domain superfamily protein EDA3 0.8377367980276987 89 AT5G23120 photosystem II stability/assembly factor, chloroplast (HCF136) HCF136 0.8375591588109684 58 AT5G07020 proline-rich family protein 0.8372723231629702 64 AT4G34190 stress enhanced protein 1 SEP1 0.8333904865757576 60 AT3G12345 unknown protein; LOCATED IN: chloroplast; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). 0.8328280137678973 61 AT2G46820 photosystem I P subunit PTAC8, TMP14, PSI-P, PSAP 0.8327427209833725 62 AT2G35370 glycine decarboxylase complex H GDCH 0.8319522438081138 63 AT1G71500 Rieske (2Fe-2S) domain-containing protein 0.8317360488155522 78 AT4G20360 RAB GTPase homolog E1B ATRAB8D, ATRABE1B, RABE1b 0.831619814287794 65 AT1G54500 Rubredoxin-like superfamily protein 0.8307803376591486 66 AT1G18170 FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0.8301502834750912 67 AT4G02530 chloroplast thylakoid lumen protein 0.8297007882000395 87 AT3G01500 carbonic anhydrase 1 CA1, ATBCA1, SABP3, ATSABP3 0.8289227118840627 69 AT1G77490 thylakoidal ascorbate peroxidase TAPX 0.82853642281639 70 AT1G32470 Single hybrid motif superfamily protein 0.8282141445425487 71 AT4G18480 P-loop containing nucleoside triphosphate hydrolases superfamily protein CH42, CHLI1, CH-42, CHL11, CHLI-1 0.8269448883495867 72 AT4G34090 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G23370.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). 0.8265840473904218 73 AT4G39970 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0.824802993882301 74 AT4G01150 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, plastoglobule, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G38100.1); Has 323 Blast hits to 323 proteins in 59 species: Archae - 0; Bacteria - 107; Metazoa - 0; Fungi - 0; Plants - 206; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). 0.8238608869557881 75 AT1G14345 NAD(P)-linked oxidoreductase superfamily protein 0.8232991904931442 76 AT3G04790 Ribose 5-phosphate isomerase, type A protein 0.8229507650535576 77 AT5G62140 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; Has 60 Blast hits to 60 proteins in 24 species: Archae - 0; Bacteria - 14; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). 0.8217604887680161 79 AT4G09350 Chaperone DnaJ-domain superfamily protein 0.8215004338867871 80 AT1G52220 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: photosystem I P subunit (TAIR:AT2G46820.2); Has 291 Blast hits to 291 proteins in 50 species: Archae - 0; Bacteria - 90; Metazoa - 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). 0.8214638343608751 81 AT1G50732 unknown protein. 0.8197860462236856 82 AT3G62030 rotamase CYP 4 ROC4 0.8187066509317155 83 AT1G20340 Cupredoxin superfamily protein DRT112, PETE2 0.8177876891246847 84 AT3G12685 Acid phosphatase/vanadium-dependent haloperoxidase-related protein 0.8169456018911702 85 AT2G35410 RNA-binding (RRM/RBD/RNP motifs) family protein 0.8169375355007663 86 AT5G06290 2-cysteine peroxiredoxin B 2CPB, 2-Cys Prx B 0.8169111361234435 87 AT3G26710 cofactor assembly of complex C CCB1 0.8167337460232684 88 AT5G38410 Ribulose bisphosphate carboxylase (small chain) family protein 0.8163160727198533 89 AT5G09660 peroxisomal NAD-malate dehydrogenase 2 PMDH2 0.8154700094243762 90 AT1G32550 2Fe-2S ferredoxin-like superfamily protein FdC1 0.8153335545593609 91 AT1G18060 unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 74 Blast hits to 74 proteins in 29 species: Archae - 0; Bacteria - 19; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). 0.8152360865793075 92 AT5G20140 SOUL heme-binding family protein 0.8149636037967658 93 AT3G26650 glyceraldehyde 3-phosphate dehydrogenase A subunit GAPA-1, GAPA 0.8148814928763346 94 AT1G16880 uridylyltransferase-related 0.813758610512869 95 AT1G43560 thioredoxin Y2 Aty2, ty2 0.8136926427039175 96 AT5G17170 rubredoxin family protein ENH1 0.8132601668971529 97 AT1G08540 RNApolymerase sigma subunit 2 ATSIG1, SIGB, ATSIG2, ABC1, SIG2, SIGA, SIG1 0.8127961981976035 98 AT5G27290 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54680.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). 0.8124629267953768 99 AT1G48030 mitochondrial lipoamide dehydrogenase 1 mtLPD1 0.8122904546500312 100