Sequence Description Alias PCC hrr AT3G02730 thioredoxin F-type 1 ATF1, TRXF1 0.8895169076421175 4 AT3G15360 thioredoxin M-type 4 ATHM4, TRX-M4, ATM4 0.8826366981264016 2 AT5G66190 ferredoxin-NADP(+)-oxidoreductase 1 FNR1, ATLFNR1 0.8797032524917449 36 AT1G45474 photosystem I light harvesting complex gene 5 LHCA5 0.8789207088153991 24 AT1G03680 thioredoxin M-type 1 ATHM1, THM1, TRX-M1, ATM1 0.8739928690686513 5 AT1G67090 ribulose bisphosphate carboxylase small chain 1A RBCS1A 0.8727106289337365 6 AT5G51110 Transcriptional coactivator/pterin dehydratase 0.8688954374630284 20 AT2G34860 DnaJ/Hsp40 cysteine-rich domain superfamily protein EDA3 0.8677110980462847 25 AT1G20340 Cupredoxin superfamily protein DRT112, PETE2 0.8667036576647884 22 AT5G58260 oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor 0.8648214081828673 20 AT1G42970 glyceraldehyde-3-phosphate dehydrogenase B subunit GAPB 0.858717595032518 44 AT1G09340 chloroplast RNA binding CRB, HIP1.3, CSP41B 0.8580567523779106 49 AT1G70760 inorganic carbon transport protein-related CRR23 0.8575302735930898 16 AT4G01150 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, plastoglobule, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G38100.1); Has 323 Blast hits to 323 proteins in 59 species: Archae - 0; Bacteria - 107; Metazoa - 0; Fungi - 0; Plants - 206; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). 0.8545885847166708 14 AT4G03280 photosynthetic electron transfer C PGR1, PETC 0.8545159819104013 30 AT5G43750 NAD(P)H dehydrogenase 18 NDH18 0.8522585280295594 76 AT3G54050 high cyclic electron flow 1 HCEF1 0.8519650702813027 66 AT1G71500 Rieske (2Fe-2S) domain-containing protein 0.8443498541087414 57 AT1G34000 one-helix protein 2 OHP2 0.842421947742772 19 AT1G14150 PsbQ-like 2 PQL1, PQL2 0.8416040485401374 27 AT5G07020 proline-rich family protein 0.8389493702431235 60 AT5G16710 dehydroascorbate reductase 1 DHAR3 0.8388444592350954 24 AT3G63140 chloroplast stem-loop binding protein of 41 kDa CSP41A 0.8386644869103903 51 AT4G21280 photosystem II subunit QA PSBQA, PSBQ-1, PSBQ 0.838537571578364 56 AT4G32260 ATPase, F0 complex, subunit B/B', bacterial/chloroplast 0.8376902075443861 25 AT2G48070 resistance to phytophthora 1 RPH1 0.8371125576760752 26 AT3G47070 LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thylakoid soluble phosphoprotein TSP9 (InterPro:IPR021584); Has 37 Blast hits to 37 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). 0.8365522824390711 27 AT1G65230 Uncharacterized conserved protein (DUF2358) 0.8341663214856905 49 AT4G10300 RmlC-like cupins superfamily protein 0.8305978165944775 30 AT3G16140 photosystem I subunit H-1 PSAH-1 0.829485490527144 31 AT5G38420 Ribulose bisphosphate carboxylase (small chain) family protein 0.8291616886972442 32 AT2G06520 photosystem II subunit X PSBX 0.8281719948868007 33 AT1G44920 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3054 (InterPro:IPR021414); Has 246 Blast hits to 246 proteins in 119 species: Archae - 14; Bacteria - 181; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). 0.8278171357223659 34 AT5G09660 peroxisomal NAD-malate dehydrogenase 2 PMDH2 0.8251014625329068 65 AT4G21210 PPDK regulatory protein ATRP1, RP1 0.824556614848257 36 AT3G56010 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 25 Blast hits to 25 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). 0.8241468341378955 37 AT5G38410 Ribulose bisphosphate carboxylase (small chain) family protein 0.8235496686487512 38 AT5G06290 2-cysteine peroxiredoxin B 2CPB, 2-Cys Prx B 0.8215870683390811 67 AT2G46820 photosystem I P subunit PTAC8, TMP14, PSI-P, PSAP 0.8185793696101874 77 AT3G51510 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 42 Blast hits to 42 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). 0.8129491533520657 43 AT1G54500 Rubredoxin-like superfamily protein 0.8120197791557096 72 AT1G04640 lipoyltransferase 2 LIP2 0.8119533965333109 49 AT1G60950 2Fe-2S ferredoxin-like superfamily protein FED A, ATFD2 0.8112745634442841 47 AT1G26220 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0.8112365973751349 48 AT1G32060 phosphoribulokinase PRK 0.8105450515076897 70 AT2G04700 ferredoxin thioredoxin reductase catalytic beta chain family protein 0.8087466990719369 50 AT1G16880 uridylyltransferase-related 0.8060168795312616 74 AT3G12345 unknown protein; LOCATED IN: chloroplast; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). 0.8052987946021256 70 AT1G67700 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 49 Blast hits to 49 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). 0.8052504596760631 58 AT5G03880 Thioredoxin family protein 0.8049714770461515 56 AT4G22830 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2499 (InterPro:IPR019634); Has 319 Blast hits to 317 proteins in 103 species: Archae - 0; Bacteria - 147; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink). 0.8047348120452436 57 AT3G26650 glyceraldehyde 3-phosphate dehydrogenase A subunit GAPA-1, GAPA 0.8043091944409893 62 AT5G35630 glutamine synthetase 2 GS2, ATGSL1, GLN2 0.8036876580226993 79 AT2G01110 Sec-independent periplasmic protein translocase PGA2, APG2, TATC, UNE3 0.8020164064720217 61 AT1G73060 Low PSII Accumulation 3 LPA3 0.8001377912350168 99 AT3G10060 FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0.7994907276008684 73 AT1G55670 photosystem I subunit G PSAG 0.7989577017183105 68 AT1G18730 NDH dependent flow 6 NDF6 0.7983023987073427 73 AT2G32480 ARABIDOPSIS SERIN PROTEASE ARASP 0.7963231275081242 72 AT3G01500 carbonic anhydrase 1 CA1, ATBCA1, SABP3, ATSABP3 0.795302713407858 73 AT1G06680 photosystem II subunit P-1 OE23, OEE2, PSBP-1, PSII-P 0.794072890057089 82 AT4G13500 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G05310.1); Has 50 Blast hits to 50 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). 0.7936386493513288 75 AT2G04039 unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2996 (InterPro:IPR021374); Has 159 Blast hits to 159 proteins in 52 species: Archae - 0; Bacteria - 76; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). 0.7933077455836288 76 AT1G02475 Polyketide cyclase/dehydrase and lipid transport superfamily protein 0.7931682501074979 77 AT5G38430 Ribulose bisphosphate carboxylase (small chain) family protein 0.7929511063042707 79 AT3G44020 thylakoid lumenal P17.1 protein 0.7929027758984273 80 AT1G54780 thylakoid lumen 18.3 kDa protein TLP18.3 0.7916973184266071 92 AT1G14345 NAD(P)-linked oxidoreductase superfamily protein 0.7902974772656451 83 AT1G63970 isoprenoid F ISPF, MECPS 0.7876151234674741 85 AT5G55710 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: Uncharacterised conserved protein ycf60 (TAIR:AT2G47840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). 0.7858228777922238 90 AT1G20810 FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0.7841870208611595 98 AT5G38660 acclimation of photosynthesis to environment APE1 0.7785449857147103 97 AT2G17695 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1990 (InterPro:IPR018960); Has 259 Blast hits to 259 proteins in 120 species: Archae - 0; Bacteria - 197; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). 0.7780917204683142 98 AT1G79510 Uncharacterized conserved protein (DUF2358) 0.7776989522901804 99