Sequence Description Alias PCC hrr AT1G71500 Rieske (2Fe-2S) domain-containing protein 0.9257899739089115 2 AT3G10060 FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0.9204102957056006 2 AT1G45474 photosystem I light harvesting complex gene 5 LHCA5 0.9182694231682612 3 AT3G63140 chloroplast stem-loop binding protein of 41 kDa CSP41A 0.9135743285103102 7 AT1G20340 Cupredoxin superfamily protein DRT112, PETE2 0.9129683574949875 5 AT1G67700 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 49 Blast hits to 49 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). 0.9086107333726245 6 AT5G09660 peroxisomal NAD-malate dehydrogenase 2 PMDH2 0.9084032675677979 7 AT4G32260 ATPase, F0 complex, subunit B/B', bacterial/chloroplast 0.906556766443139 8 AT3G54050 high cyclic electron flow 1 HCEF1 0.9058814633243253 17 AT5G66190 ferredoxin-NADP(+)-oxidoreductase 1 FNR1, ATLFNR1 0.8970188347660677 18 AT1G42970 glyceraldehyde-3-phosphate dehydrogenase B subunit GAPB 0.8964171046242043 21 AT5G35630 glutamine synthetase 2 GS2, ATGSL1, GLN2 0.8936204705700155 12 AT1G09340 chloroplast RNA binding CRB, HIP1.3, CSP41B 0.8929306258299442 22 AT3G12780 phosphoglycerate kinase 1 PGK1 0.8915157153578425 14 AT5G07020 proline-rich family protein 0.8888786329436826 15 AT5G16710 dehydroascorbate reductase 1 DHAR3 0.8830419046598368 16 AT1G06680 photosystem II subunit P-1 OE23, OEE2, PSBP-1, PSII-P 0.882411963420422 17 AT5G43750 NAD(P)H dehydrogenase 18 NDH18 0.8822189932259354 33 AT3G14420 Aldolase-type TIM barrel family protein 0.875858603221709 19 AT4G38970 fructose-bisphosphate aldolase 2 FBA2 0.8742011546474021 20 AT2G46820 photosystem I P subunit PTAC8, TMP14, PSI-P, PSAP 0.8710011977403388 21 AT5G66570 PS II oxygen-evolving complex 1 OEE33, PSBO1, OEE1, MSP-1, PSBO-1, OE33 0.8658511521975409 22 AT4G37930 serine transhydroxymethyltransferase 1 STM, SHM1, SHMT1 0.8608878168940991 30 AT1G03680 thioredoxin M-type 1 ATHM1, THM1, TRX-M1, ATM1 0.8608169538528435 24 AT4G04640 ATPase, F1 complex, gamma subunit protein ATPC1 0.8602870238045971 29 AT3G14415 Aldolase-type TIM barrel family protein 0.857736669640164 26 AT1G12900 glyceraldehyde 3-phosphate dehydrogenase A subunit 2 GAPA-2 0.8573388197098344 49 AT2G39470 PsbP-like protein 2 PPL2 0.8556032602128969 65 AT3G46780 plastid transcriptionally active 16 PTAC16 0.8553449824240116 41 AT1G50320 thioredoxin X THX, ATHX, ATX 0.8545159819104013 30 AT3G61870 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 200 Blast hits to 200 proteins in 73 species: Archae - 0; Bacteria - 112; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). 0.8535290892720916 31 AT1G54780 thylakoid lumen 18.3 kDa protein TLP18.3 0.8533446571575285 32 AT5G03880 Thioredoxin family protein 0.8529766938922659 33 AT1G32060 phosphoribulokinase PRK 0.850265603091175 34 AT2G21280 NAD(P)-binding Rossmann-fold superfamily protein ATSULA, GC1, SULA 0.8482973913009831 35 AT2G01110 Sec-independent periplasmic protein translocase PGA2, APG2, TATC, UNE3 0.8482798901406686 36 AT3G55800 sedoheptulose-bisphosphatase SBPASE 0.8473070328584594 70 AT1G15980 NDH-dependent cyclic electron flow 1 NDH48, NDF1 0.8469235591878507 58 AT1G65230 Uncharacterized conserved protein (DUF2358) 0.8464868748865931 39 AT2G34860 DnaJ/Hsp40 cysteine-rich domain superfamily protein EDA3 0.8455351656518856 68 AT2G27680 NAD(P)-linked oxidoreductase superfamily protein 0.8444410122063786 41 AT4G35250 NAD(P)-binding Rossmann-fold superfamily protein 0.8438851409053563 42 AT1G73655 FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0.8437975874686104 43 AT1G76450 Photosystem II reaction center PsbP family protein 0.8426944215893365 51 AT1G55480 protein containing PDZ domain, a K-box domain, and a TPR region ZKT 0.840278057315876 56 AT3G48420 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0.8401851921421893 61 AT5G36790 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0.8394242363047185 56 AT5G36700 2-phosphoglycolate phosphatase 1 PGLP1, ATPGLP1 0.8394242363047185 56 AT2G39730 rubisco activase RCA 0.8389497946815297 49 AT5G38410 Ribulose bisphosphate carboxylase (small chain) family protein 0.8369960809067762 50 AT1G67090 ribulose bisphosphate carboxylase small chain 1A RBCS1A 0.8365933274851269 51 AT4G21280 photosystem II subunit QA PSBQA, PSBQ-1, PSBQ 0.8364241454935426 60 AT5G51110 Transcriptional coactivator/pterin dehydratase 0.8362911170752542 79 AT4G22890 PGR5-LIKE A PGR5-LIKE A 0.8356989251796018 54 AT5G58260 oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor 0.8355218233950522 55 AT1G11860 Glycine cleavage T-protein family 0.8350143689229771 82 AT3G02730 thioredoxin F-type 1 ATF1, TRXF1 0.8339179695506183 57 AT4G39710 FK506-binding protein 16-2 FKBP16-2 0.8331844895613367 58 AT1G04420 NAD(P)-linked oxidoreductase superfamily protein 0.8327016303305173 59 AT1G31330 photosystem I subunit F PSAF 0.8320790267709504 60 AT5G21430 Chaperone DnaJ-domain superfamily protein 0.832064960462219 61 AT3G26650 glyceraldehyde 3-phosphate dehydrogenase A subunit GAPA-1, GAPA 0.8317830780551887 62 AT3G12345 unknown protein; LOCATED IN: chloroplast; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). 0.8304875449100645 63 AT1G16080 unknown protein; LOCATED IN: apoplast, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 81 Blast hits to 81 proteins in 28 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). 0.8296182816662278 64 AT3G62030 rotamase CYP 4 ROC4 0.8286277883974402 70 AT3G15360 thioredoxin M-type 4 ATHM4, TRX-M4, ATM4 0.8276996471313655 66 AT3G01500 carbonic anhydrase 1 CA1, ATBCA1, SABP3, ATSABP3 0.8271466239803201 67 AT5G38520 alpha/beta-Hydrolases superfamily protein 0.8270602868510268 68 AT3G61470 photosystem I light harvesting complex gene 2 LHCA2 0.82374030558941 69 AT5G01530 light harvesting complex photosystem II LHCB4.1 0.823640104566838 70 AT5G06290 2-cysteine peroxiredoxin B 2CPB, 2-Cys Prx B 0.8212447096775797 71 AT1G26220 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0.8208464719281116 72 AT3G56650 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein 0.8193138387459713 74 AT3G11630 Thioredoxin superfamily protein 0.819170634294868 75 AT1G68010 hydroxypyruvate reductase HPR, ATHPR1 0.8185272153364451 76 AT5G38420 Ribulose bisphosphate carboxylase (small chain) family protein 0.8178343234206183 78 AT2G21330 fructose-bisphosphate aldolase 1 FBA1 0.8176068107671002 79 AT5G27290 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54680.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). 0.8168086368079123 80 AT5G23120 photosystem II stability/assembly factor, chloroplast (HCF136) HCF136 0.8161075525701096 81 AT1G52510 alpha/beta-Hydrolases superfamily protein 0.8157538487388427 82 AT1G44920 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3054 (InterPro:IPR021414); Has 246 Blast hits to 246 proteins in 119 species: Archae - 14; Bacteria - 181; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). 0.8154628058111494 83 AT4G12800 photosystem I subunit l PSAL 0.8154047000130579 84 AT3G04790 Ribose 5-phosphate isomerase, type A protein 0.8151197051975972 85 AT4G10340 light harvesting complex of photosystem II 5 LHCB5 0.8138633088729067 86 AT5G19220 ADP glucose pyrophosphorylase large subunit 1 APL1, ADG2 0.8128260176157098 87 AT1G44575 Chlorophyll A-B binding family protein NPQ4, PSBS 0.8123750510565012 99 AT5G20140 SOUL heme-binding family protein 0.8123367590703706 89 AT1G18060 unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 74 Blast hits to 74 proteins in 29 species: Archae - 0; Bacteria - 19; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). 0.8110369437526194 90 AT5G38660 acclimation of photosynthesis to environment APE1 0.8087343321676971 91 AT1G77490 thylakoidal ascorbate peroxidase TAPX 0.808026362932112 92 AT1G32080 membrane protein, putative 0.8075976001859516 93 AT5G30510 ribosomal protein S1 RPS1, ARRPS1 0.8071241445442832 94 AT5G13410 FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0.8063545180942222 96 AT3G16140 photosystem I subunit H-1 PSAH-1 0.8058394328415499 98 AT1G77090 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein 0.8031900857041611 100