Sequence Description Alias PCC hrr AT1G68590 Ribosomal protein PSRP-3/Ycf65 0.9375008508202634 1 AT5G11450 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein 0.9130222326841926 2 AT3G26060 Thioredoxin superfamily protein ATPRX Q 0.911648119360488 3 AT1G32470 Single hybrid motif superfamily protein 0.9101933680954264 8 AT1G75350 Ribosomal protein L31 emb2184 0.9101226713817044 9 AT3G44890 ribosomal protein L9 RPL9 0.9086459966370871 8 AT4G11175 Nucleic acid-binding, OB-fold-like protein 0.9062960065486672 7 AT5G45680 FK506-binding protein 13 ATFKBP13, FKBP13 0.8991110982727809 9 AT1G43560 thioredoxin Y2 Aty2, ty2 0.8976705903585246 9 AT5G40950 ribosomal protein large subunit 27 RPL27 0.8964508459873469 12 AT3G52150 RNA-binding (RRM/RBD/RNP motifs) family protein 0.8886881946463375 21 AT2G28605 Photosystem II reaction center PsbP family protein 0.8861507191699152 12 AT3G55330 PsbP-like protein 1 PPL1 0.8856237272495546 13 AT1G05190 Ribosomal protein L6 family emb2394 0.8833272870345862 25 AT2G03420 unknown protein; Has 38 Blast hits to 38 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). 0.8829727545831481 15 AT3G56910 plastid-specific 50S ribosomal protein 5 PSRP5 0.8828180388485852 18 AT2G38140 plastid-specific ribosomal protein 4 PSRP4 0.8826693771809481 17 AT1G32990 plastid ribosomal protein l11 PRPL11 0.8803560880658785 18 AT3G45050 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 26 Blast hits to 26 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). 0.8785786599927021 19 AT2G24090 Ribosomal protein L35 0.8772749023920025 20 AT3G25920 ribosomal protein L15 RPL15 0.8761497850059031 37 AT4G02530 chloroplast thylakoid lumen protein 0.8743729081829473 25 AT2G17972 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; Has 34 Blast hits to 34 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). 0.8742499196225271 23 AT4G34190 stress enhanced protein 1 SEP1 0.8734478120692195 24 AT5G13510 Ribosomal protein L10 family protein 0.8720259021541076 25 AT2G33800 Ribosomal protein S5 family protein 0.8708426233186527 26 AT5G14910 Heavy metal transport/detoxification superfamily protein 0.8681485744385259 28 AT1G64510 Translation elongation factor EF1B/ribosomal protein S6 family protein 0.8669403947393263 28 AT3G12685 Acid phosphatase/vanadium-dependent haloperoxidase-related protein 0.8653688122254012 29 AT1G48350 Ribosomal L18p/L5e family protein 0.8620683136542638 30 AT2G29180 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 34 Blast hits to 33 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). 0.8612488227879681 31 AT2G48070 resistance to phytophthora 1 RPH1 0.8608099115484841 32 AT1G50900 Ankyrin repeat family protein GDC1 0.8589036719236555 33 AT5G54600 Translation protein SH3-like family protein 0.8579506630998172 34 AT1G01080 RNA-binding (RRM/RBD/RNP motifs) family protein 0.8570478187884512 35 AT2G20890 photosystem II reaction center PSB29 protein PSB29, THF1 0.8560434196059765 43 AT3G26710 cofactor assembly of complex C CCB1 0.8551340250760545 37 AT4G24930 thylakoid lumenal 17.9 kDa protein, chloroplast 0.853202502425191 38 AT1G55490 chaperonin 60 beta CPN60B, LEN1 0.8502470771195592 39 AT1G59840 cofactor assembly of complex C CCB4 0.8496365707473313 40 AT2G35370 glycine decarboxylase complex H GDCH 0.8494996016731898 41 AT2G44650 chloroplast chaperonin 10 CPN10, CHL-CPN10 0.848877579415744 42 AT3G08740 elongation factor P (EF-P) family protein 0.8464404630576592 43 AT4G13500 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G05310.1); Has 50 Blast hits to 50 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). 0.8437239592575853 44 AT1G54500 Rubredoxin-like superfamily protein 0.8430747919066783 45 AT3G62030 rotamase CYP 4 ROC4 0.8430648363298482 52 AT2G43560 FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0.8427291094006237 60 AT5G63310 nucleoside diphosphate kinase 2 NDPK2, NDPK IA IA, NDPK1A, NDPK IA, ATNDPK2 0.8424568685273534 48 AT5G52960 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3143 (InterPro:IPR021489); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). 0.8383701927237067 49 AT1G35680 Ribosomal protein L21 0.837589622330953 53 AT3G54210 Ribosomal protein L17 family protein 0.8357974429260977 51 AT3G13120 Ribosomal protein S10p/S20e family protein 0.8344003997746585 52 AT1G49975 INVOLVED IN: photosynthesis; LOCATED IN: photosystem I, chloroplast, thylakoid membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre subunit N (InterPro:IPR008796); Has 34 Blast hits to 34 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). 0.8340241956138224 53 AT1G63610 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G14910.1); Has 537 Blast hits to 411 proteins in 100 species: Archae - 0; Bacteria - 231; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 212 (source: NCBI BLink). 0.8332514237443808 54 AT5G51110 Transcriptional coactivator/pterin dehydratase 0.831594063982668 85 AT1G29070 Ribosomal protein L34 0.8270061532082403 57 AT2G35410 RNA-binding (RRM/RBD/RNP motifs) family protein 0.8241754342590545 74 AT5G36120 cofactor assembly, complex C (B6F) CCB3, atylmg3, YLMG3 0.8232881157012624 59 AT1G04640 lipoyltransferase 2 LIP2 0.8223614993189693 60 AT5G28750 Bacterial sec-independent translocation protein mttA/Hcf106 0.8217710860379654 61 AT2G43030 Ribosomal protein L3 family protein 0.8215183843940428 62 AT4G22830 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2499 (InterPro:IPR019634); Has 319 Blast hits to 317 proteins in 103 species: Archae - 0; Bacteria - 147; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink). 0.8202445737025422 63 AT4G12060 Double Clp-N motif protein 0.8200593973659132 64 AT5G49030 tRNA synthetase class I (I, L, M and V) family protein OVA2 0.8185534849341528 65 AT5G53580 NAD(P)-linked oxidoreductase superfamily protein 0.818475822609601 66 AT2G35500 shikimate kinase like 2 SKL2 0.8181669285729801 81 AT5G38060 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G65000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). 0.8180225794985387 69 AT5G35220 Peptidase M50 family protein EGY1 0.817594145034538 70 AT1G18730 NDH dependent flow 6 NDF6 0.8175843064771918 71 AT3G24590 plastidic type i signal peptidase 1 PLSP1 0.817553474661687 72 AT1G74070 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein 0.8166435745096405 73 AT1G73060 Low PSII Accumulation 3 LPA3 0.8166014156471844 74 AT5G16715 ATP binding;valine-tRNA ligases;aminoacyl-tRNA ligases;nucleotide binding;ATP binding;aminoacyl-tRNA ligases EMB2247 0.8158961401211016 75 AT4G20360 RAB GTPase homolog E1B ATRAB8D, ATRABE1B, RABE1b 0.815608948372576 92 AT2G01590 chlororespiratory reduction 3 CRR3 0.8152992284021252 79 AT4G01310 Ribosomal L5P family protein 0.8136876671235309 78 AT4G10300 RmlC-like cupins superfamily protein 0.8129989511494471 79 AT4G39040 RNA-binding CRS1 / YhbY (CRM) domain protein 0.812292837991446 80 AT2G21530 SMAD/FHA domain-containing protein 0.8120043227041449 81 AT5G08050 Protein of unknown function (DUF1118) 0.8118994165000005 85 AT5G58250 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2488 (InterPro:IPR019616); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). 0.8110304831360342 84 AT5G39210 chlororespiratory reduction 7 CRR7 0.8095774072153958 85 AT3G52380 chloroplast RNA-binding protein 33 PDE322, CP33 0.8087350263402453 89 AT1G07320 ribosomal protein L4 RPL4 0.8079331545523591 87 AT5G06290 2-cysteine peroxiredoxin B 2CPB, 2-Cys Prx B 0.8074907144560113 94 AT4G18370 DEGP protease 5 HHOA, DEG5, DEGP5 0.8066322790884889 89 AT5G52970 thylakoid lumen 15.0 kDa protein 0.8062000654978319 90 AT5G21920 YGGT family protein YLMG2, ATYLMG2 0.8055210139281771 91 AT2G47590 photolyase/blue-light receptor 2 PHR2 0.8049967474145608 92 AT1G20810 FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0.8042824511179808 93 AT3G16250 NDH-dependent cyclic electron flow 1 NDF4 0.8041691032831167 94 AT1G44920 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3054 (InterPro:IPR021414); Has 246 Blast hits to 246 proteins in 119 species: Archae - 14; Bacteria - 181; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). 0.8031631611596733 95 AT1G03475 Coproporphyrinogen III oxidase ATCPO-I, LIN2, HEMF1 0.8030076734020795 96 AT4G28660 photosystem II reaction center PSB28 protein PSB28 0.801447013073423 97 AT4G15110 cytochrome P450, family 97, subfamily B, polypeptide 3 CYP97B3 0.7983821415663988 99 AT4G29060 elongation factor Ts family protein emb2726 0.7981780016734585 100