Sequence Description Alias PCC hrr MA_10366066g0010 Presequence protease 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana (sp|q9ljl3|prep1_arath : 136.0) 0.991557085447277 1 MA_70588g0010 Presequence protease 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana (sp|q9ljl3|prep1_arath : 353.0) 0.9798567076126743 2 MA_8117g0010 ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic OS=Solanum lycopersicum (sp|p31542|clpab_sollc : 604.0) 0.9749909992636666 4 MA_10437193g0010 Probable zinc metalloprotease EGY1, chloroplastic OS=Arabidopsis thaliana (sp|q949y5|egy1_arath : 352.0) 0.9746187472903833 4 MA_98203g0010 No annotation 0.9739182578501612 5 MA_483025g0010 no hits & (original description: none) 0.9721466967227307 6 MA_596288g0010 Chaperone protein ClpC1, chloroplastic OS=Oryza sativa subsp. japonica (sp|q7f9i1|clpc1_orysj : 435.0) 0.9716666408089261 7 MA_10436955g0010 protein kinase (ABC1) 0.9704509098249015 8 MA_10435372g0010 phosphate transporter (PHT4) 0.9697025325530791 10 MA_9585721g0010 no hits & (original description: none) 0.9679525157336052 10 MA_8784390g0010 no hits & (original description: none) 0.9658019522166824 11 MA_742675g0010 No annotation 0.9648238376298301 13 MA_5176g0010 myo-inositol-1-phosphate synthase 0.9645066135387366 13 MA_630582g0010 no hits & (original description: none) 0.9640998141045001 14 MA_10434075g0010 component psPSRP2 of small ribosomal subunit proteome 0.9627274832772532 26 MA_188257g0010 no hits & (original description: none) 0.962453446954744 19 MA_6842g0010 no hits & (original description: none) 0.9623813889686087 20 MA_72886g0010 Pentatricopeptide repeat-containing protein At5g50390, chloroplastic OS=Arabidopsis thaliana (sp|q9fk33|pp427_arath : 603.0) 0.9615073450023565 18 MA_20787g0010 Glutathione reductase, chloroplastic (Fragment) OS=Nicotiana tabacum (sp|p80461|gshrp_tobac : 103.0) 0.96127312985589 19 MA_174635g0010 no hits & (original description: none) 0.9606927219421812 21 MA_10437266g0010 Probable inactive ATP-dependent zinc metalloprotease FTSHI 4, chloroplastic OS=Arabidopsis thaliana (sp|f4kf14|ftsi4_arath : 387.0) 0.9601590177136682 21 MA_10435649g0010 Uncharacterized aarF domain-containing protein kinase At1g71810, chloroplastic OS=Arabidopsis thaliana (sp|q94bu1|y1181_arath : 110.0) 0.9590355586945356 22 MA_10429819g0020 non-proteolytic core component ClpR of chloroplast Clp-type protease complex 0.9587931717522695 23 MA_407396g0010 Stromal processing peptidase, chloroplastic OS=Arabidopsis thaliana (sp|q9fih8|spp_arath : 303.0) 0.9587061937381803 24 MA_242539g0010 no hits & (original description: none) 0.9584696366232762 25 MA_102149g0010 transketolase. transketolase 0.9584100175168316 26 MA_10436583g0020 Presequence protease 2, chloroplastic/mitochondrial OS=Arabidopsis thaliana (sp|q8vy06|prep2_arath : 209.0) 0.9581271138140112 27 MA_124140g0010 no hits & (original description: none) 0.9574391193828208 28 MA_10433383g0010 protein kinase (ABC1) 0.9574003148207435 29 MA_906445g0010 No annotation 0.9570296918942899 30 MA_10181415g0010 no hits & (original description: none) 0.9569676882992029 31 MA_94360g0010 subunit alpha of E1 pyruvate dehydrogenase component 0.9566968139646772 32 MA_1712g0010 Chaperone protein ClpC, chloroplastic OS=Pisum sativum (sp|p35100|clpc_pea : 265.0) 0.9564196598579059 80 MA_116156g0010 no hits & (original description: none) 0.955783043767207 34 MA_10436405g0010 no hits & (original description: none) 0.9556921478046244 35 MA_298732g0010 Stromal processing peptidase, chloroplastic OS=Arabidopsis thaliana (sp|q9fih8|spp_arath : 322.0) 0.9555248872025255 36 MA_6876796g0010 No annotation 0.9554020242621496 45 MA_260111g0010 No annotation 0.9549148650297207 38 MA_1160713g0010 ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic OS=Solanum lycopersicum (sp|p31542|clpab_sollc : 174.0) 0.9544160803895394 39 MA_9569g0010 no hits & (original description: none) 0.9542273124515184 40 MA_10430415g0010 no hits & (original description: none) 0.9538198916383059 41 MA_69306g0030 no hits & (original description: none) 0.953542557127939 42 MA_4340g0010 IF-2 translation initiation factor 0.9534360941236689 54 MA_952592g0010 ATP-dependent Clp protease proteolytic subunit 3, chloroplastic OS=Arabidopsis thaliana (sp|q9sxj6|clpp3_arath : 100.0) 0.9533857355951096 44 MA_10437027g0010 ABC transporter F family member 5 OS=Arabidopsis thaliana (sp|q9lv93|ab5f_arath : 735.0) 0.9521874400245195 50 MA_10435533g0010 no hits & (original description: none) 0.9516612656221144 46 MA_10428389g0010 photosynthetic acclimation STN8 kinase. protein kinase (STN) 0.9515397279515165 47 MA_10435618g0010 zeaxanthin epoxidase. zeaxanthin epoxidase (ZEP). zeaxanthin epoxidase (ABA1) 0.9513697895539758 48 MA_10156354g0010 No annotation 0.9511634029021366 64 MA_587689g0010 RuBisCO large subunit-binding protein subunit alpha (Fragment) OS=Ricinus communis (sp|p08824|ruba_ricco : 352.0) 0.9508700121377784 50 MA_28715g0010 Light-induced protein, chloroplastic OS=Solanum tuberosum (sp|p80471|lipc_soltu : 152.0) 0.9504256495633726 51 MA_8445490g0010 Protein ACTIVITY OF BC1 COMPLEX KINASE 7, chloroplastic OS=Arabidopsis thaliana (sp|b9dgy1|ab1k7_arath : 117.0) 0.9503639678682801 52 MA_10050138g0010 protein-only ribonuclease (RNase P) 0.9499985875281414 53 MA_961483g0010 no hits & (original description: none) 0.9498619609739484 54 MA_261436g0010 UDP-sulfoquinovose synthase 0.9495531847064068 55 MA_139183g0010 no hits & (original description: none) 0.9495301834473344 56 MA_58890g0010 phosphoglucan, water dikinase (PWD) 0.9493014254716626 65 MA_159242g0010 no description available(sp|q9zuu2|pxl2c_arath : 85.9) 0.9492381172151652 58 MA_7675554g0010 pyrimidine reductase 0.9486916759530198 59 MA_732576g0010 ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial OS=Arabidopsis thaliana (sp|q9fgm0|ftshb_arath : 246.0) 0.9484909808263835 60 MA_185406g0010 Phosphoglucan, water dikinase, chloroplastic OS=Arabidopsis thaliana (sp|q6zy51|pwd_arath : 197.0) 0.9482876318416313 79 MA_6176566g0010 no hits & (original description: none) 0.9481713881294512 62 MA_10436789g0010 no hits & (original description: none) 0.9479347613777609 63 MA_10215114g0010 no hits & (original description: none) 0.9477574190661449 64 MA_7534137g0010 Zeaxanthin epoxidase, chloroplastic OS=Prunus armeniaca (sp|o81360|aba2_pruar : 84.3) 0.9476520772256591 65 MA_138810g0010 Putative elongation factor TypA-like SVR3, chloroplastic OS=Arabidopsis thaliana (sp|f4k410|svr3_arath : 653.0) 0.9473592663249696 66 MA_99207g0020 aspartate aminotransferase 0.9472059631698874 67 MA_153977g0010 Plastid-lipid-associated protein, chloroplastic OS=Citrus unshiu (sp|q9zwq8|pap_citun : 180.0) 0.9471299636688076 68 MA_10433730g0010 chlorophyll dephytylase (CLD) 0.9470899647360366 92 MA_176956g0010 pepsin-type protease 0.9464572387572688 70 MA_283144g0010 Pentatricopeptide repeat-containing protein At5g46580, chloroplastic OS=Arabidopsis thaliana (sp|q9ls25|pp420_arath : 656.0) 0.9462732462998125 72 MA_8499291g0010 WAT1-related protein At3g02690, chloroplastic OS=Arabidopsis thaliana (sp|q93v85|wtr16_arath : 149.0) 0.9461596159508275 73 MA_159916g0010 proteolytic core component ClpP1/3-6 of chloroplast Clp-type protease complex 0.9459443938525274 74 MA_164820g0010 proteolytic core component ClpP1/3-6 of chloroplast Clp-type protease complex 0.9459443938525274 75 MA_10428345g0020 Prolycopene isomerase, chloroplastic OS=Arabidopsis thaliana (sp|q9m9y8|crtso_arath : 101.0) 0.9451953287848723 77 MA_10434897g0010 hydroxymethylpyrimidine phosphate synthase (ThiC) 0.944871496191745 77 MA_10435362g0010 CDK5RAP1-like protein OS=Oryza sativa subsp. japonica (sp|q2r1u4|ck5p1_orysj : 209.0) 0.9443782848896717 95 MA_69152g0010 Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana (sp|q9lff1|pp281_arath : 227.0) 0.9440837877200458 79 MA_10430949g0010 No annotation 0.94383308506574 81 MA_10435664g0010 no description available(sp|q8ry11|ampp2_arath : 295.0) & Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase acting on peptide bond (peptidase)(50.3.4 : 208.1) 0.9438319949108864 82 MA_173075g0010 no hits & (original description: none) 0.943626594308716 83 MA_453303g0010 no hits & (original description: none) 0.9435960280853082 84 MA_145425g0010 Chaperone protein ClpC2, chloroplastic OS=Oryza sativa subsp. japonica (sp|q2qvg9|clpc2_orysj : 263.0) 0.9434741201667552 96 MA_65213g0010 Chaperone protein ClpC2, chloroplastic OS=Oryza sativa subsp. japonica (sp|q2qvg9|clpc2_orysj : 263.0) 0.9434741201667552 96 MA_10428599g0010 no hits & (original description: none) 0.9432302322137314 87 MA_184421g0020 RAF1 assembly factor involved in RuBisCo assembly 0.9430587013917701 88 MA_10056732g0010 no hits & (original description: none) 0.9429695935791103 89 MA_269999g0010 Putative elongation factor TypA-like SVR3, chloroplastic OS=Arabidopsis thaliana (sp|f4k410|svr3_arath : 274.0) 0.9429147756326138 90 MA_122602g0010 Pentatricopeptide repeat-containing protein MRL1, chloroplastic OS=Arabidopsis thaliana (sp|q0wlc6|pp349_arath : 162.0) 0.9427667418778842 91 MA_10154616g0010 Phosphoglucan, water dikinase, chloroplastic OS=Arabidopsis thaliana (sp|q6zy51|pwd_arath : 107.0) 0.9423558398440185 92 MA_10436657g0010 flavodiiron protein of pseudo-cyclic electron flow 0.9422315379155369 93 MA_3181g0010 no hits & (original description: none) 0.9420025849747685 94 MA_167483g0020 component UPF3 of RNA quality control Exon Junction complex 0.941971986627307 95 MA_2656g0030 component UPF3 of RNA quality control Exon Junction complex 0.941971986627307 96 MA_10436991g0010 no hits & (original description: none) 0.9419398928806714 97 MA_190300g0010 ATPase ARSA1 OS=Chlamydomonas reinhardtii (sp|a8jgb0|asna1_chlre : 132.0) & Enzyme classification.EC_3 hydrolases.EC_3.6 hydrolase acting on acid anhydride(50.3.6 : 81.0) 0.9416764783381713 99 MA_31803g0010 Glutathione reductase, chloroplastic OS=Arabidopsis thaliana (sp|p42770|gshrp_arath : 200.0) 0.9414061377675151 100