Sequence Description Alias PCC hrr AT4G02530 chloroplast thylakoid lumen protein 0.9115340944904885 4 AT2G35410 RNA-binding (RRM/RBD/RNP motifs) family protein 0.9021614758709807 2 AT5G21430 Chaperone DnaJ-domain superfamily protein 0.895659219562297 3 AT3G26710 cofactor assembly of complex C CCB1 0.8934622646669189 4 AT2G39470 PsbP-like protein 2 PPL2 0.8932003194592778 23 AT2G01590 chlororespiratory reduction 3 CRR3 0.8922365916211156 6 AT1G55480 protein containing PDZ domain, a K-box domain, and a TPR region ZKT 0.8872659314048997 20 AT3G01480 cyclophilin 38 ATCYP38, CYP38 0.8854074214790929 9 AT2G35370 glycine decarboxylase complex H GDCH 0.8826367548743385 12 AT3G55330 PsbP-like protein 1 PPL1 0.8801248148442582 15 AT5G43750 NAD(P)H dehydrogenase 18 NDH18 0.8791000554589723 41 AT1G32550 2Fe-2S ferredoxin-like superfamily protein FdC1 0.87905730372529 12 AT5G51110 Transcriptional coactivator/pterin dehydratase 0.8778798985041331 14 AT1G71500 Rieske (2Fe-2S) domain-containing protein 0.8767728879436437 16 AT2G34860 DnaJ/Hsp40 cysteine-rich domain superfamily protein EDA3 0.8766750968894865 15 AT4G34190 stress enhanced protein 1 SEP1 0.8746641766426904 16 AT1G18170 FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0.8713670837864839 17 AT4G04640 ATPase, F1 complex, gamma subunit protein ATPC1 0.8703365969011488 23 AT4G09010 ascorbate peroxidase 4 APX4, TL29 0.8693958983647105 19 AT3G61870 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 200 Blast hits to 200 proteins in 73 species: Archae - 0; Bacteria - 112; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). 0.8678589598957384 20 AT4G34090 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G23370.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). 0.866031049886243 21 AT5G08650 Small GTP-binding protein 0.8641901967093353 22 AT3G55250 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 46 Blast hits to 46 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). 0.8634607335937388 23 AT1G45474 photosystem I light harvesting complex gene 5 LHCA5 0.8628835508344379 41 AT5G45680 FK506-binding protein 13 ATFKBP13, FKBP13 0.8622966671596916 28 AT3G48420 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0.8621796132645005 35 AT3G54050 high cyclic electron flow 1 HCEF1 0.8621163935492531 53 AT1G19150 photosystem I light harvesting complex gene 6 LHCA2*1, LHCA6 0.8611132037202007 30 AT1G11860 Glycine cleavage T-protein family 0.8604852648839221 40 AT2G27680 NAD(P)-linked oxidoreductase superfamily protein 0.8574238846408363 30 AT4G24930 thylakoid lumenal 17.9 kDa protein, chloroplast 0.8568681729911576 31 AT1G08540 RNApolymerase sigma subunit 2 ATSIG1, SIGB, ATSIG2, ABC1, SIG2, SIGA, SIG1 0.8542791424665009 32 AT1G74730 Protein of unknown function (DUF1118) 0.8541101630487783 48 AT5G19220 ADP glucose pyrophosphorylase large subunit 1 APL1, ADG2 0.853964299843107 34 AT1G56500 haloacid dehalogenase-like hydrolase family protein 0.8535077137559798 35 AT2G43560 FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0.8532968845315821 42 AT1G32470 Single hybrid motif superfamily protein 0.8529999001576023 42 AT5G23120 photosystem II stability/assembly factor, chloroplast (HCF136) HCF136 0.8480293606168523 38 AT4G24770 31-kDa RNA binding protein ATRBP31, CP31, ATRBP33, RBP31 0.847759979063612 39 AT3G62030 rotamase CYP 4 ROC4 0.8474455792650151 45 AT1G04640 lipoyltransferase 2 LIP2 0.8473714710988847 41 AT1G50450 Saccharopine dehydrogenase 0.847294178400516 42 AT1G15980 NDH-dependent cyclic electron flow 1 NDH48, NDF1 0.8459706079795373 59 AT3G55800 sedoheptulose-bisphosphatase SBPASE 0.8449044328839952 74 AT5G38520 alpha/beta-Hydrolases superfamily protein 0.8447668534203067 45 AT4G20360 RAB GTPase homolog E1B ATRAB8D, ATRABE1B, RABE1b 0.8442538786921117 46 AT4G18480 P-loop containing nucleoside triphosphate hydrolases superfamily protein CH42, CHLI1, CH-42, CHL11, CHLI-1 0.8437916633415845 47 AT1G03630 protochlorophyllide oxidoreductase C POR C, PORC 0.8437009247811319 48 AT5G66190 ferredoxin-NADP(+)-oxidoreductase 1 FNR1, ATLFNR1 0.8435180291609606 86 AT1G43560 thioredoxin Y2 Aty2, ty2 0.8434375241902339 50 AT4G03280 photosynthetic electron transfer C PGR1, PETC 0.8426944215893365 51 AT5G13410 FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0.8426509043957837 52 AT3G56650 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein 0.8421097617537054 53 AT1G05190 Ribosomal protein L6 family emb2394 0.8409412806408154 69 AT1G64770 NDH-dependent cyclic electron flow 1 NDH45, NDF2 0.840836508277182 55 AT1G04420 NAD(P)-linked oxidoreductase superfamily protein 0.8406943641562741 56 AT1G51110 Plastid-lipid associated protein PAP / fibrillin family protein 0.8404913131058724 57 AT5G08050 Protein of unknown function (DUF1118) 0.8387291226672048 58 AT3G52380 chloroplast RNA-binding protein 33 PDE322, CP33 0.8376983071327945 59 AT1G75690 DnaJ/Hsp40 cysteine-rich domain superfamily protein 0.8371024851743046 60 AT1G77090 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein 0.8368033867919191 61 AT4G17600 Chlorophyll A-B binding family protein LIL3:1 0.8367344018511658 62 AT4G13500 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G05310.1); Has 50 Blast hits to 50 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). 0.8357512358917092 63 AT3G04790 Ribose 5-phosphate isomerase, type A protein 0.835329495650861 64 AT5G20140 SOUL heme-binding family protein 0.8352555558982346 65 AT2G21530 SMAD/FHA domain-containing protein 0.8351223020449272 66 AT5G07020 proline-rich family protein 0.8343628271290152 71 AT4G21280 photosystem II subunit QA PSBQA, PSBQ-1, PSBQ 0.8339670093118698 68 AT4G39970 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0.8336179745979194 69 AT2G21280 NAD(P)-binding Rossmann-fold superfamily protein ATSULA, GC1, SULA 0.8332066626243328 70 AT1G12900 glyceraldehyde 3-phosphate dehydrogenase A subunit 2 GAPA-2 0.8331740573533957 77 AT3G59780 Rhodanese/Cell cycle control phosphatase superfamily protein 0.832273371229445 72 AT5G36790 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0.8311258635642141 73 AT5G36700 2-phosphoglycolate phosphatase 1 PGLP1, ATPGLP1 0.8311258635642141 74 AT1G16880 uridylyltransferase-related 0.8300847072385195 75 AT3G25920 ribosomal protein L15 RPL15 0.8282635698692108 80 AT2G20890 photosystem II reaction center PSB29 protein PSB29, THF1 0.8282251784221547 96 AT3G12685 Acid phosphatase/vanadium-dependent haloperoxidase-related protein 0.8281175855774069 78 AT1G31190 myo-inositol monophosphatase like 1 IMPL1 0.8274496095517465 79 AT4G28660 photosystem II reaction center PSB28 protein PSB28 0.8269817616399121 80 AT2G30170 Protein phosphatase 2C family protein 0.8265109152655886 81 AT1G78915 Tetratricopeptide repeat (TPR)-like superfamily protein 0.8264933203360183 82 AT5G58260 oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor 0.8256831529532968 83 AT1G42970 glyceraldehyde-3-phosphate dehydrogenase B subunit GAPB 0.8254235611863825 95 AT2G21385 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 49 Blast hits to 49 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). 0.8253705784618716 85 AT2G26500 cytochrome b6f complex subunit (petM), putative 0.8253477097837688 86 AT4G01150 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, plastoglobule, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G38100.1); Has 323 Blast hits to 323 proteins in 59 species: Archae - 0; Bacteria - 107; Metazoa - 0; Fungi - 0; Plants - 206; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). 0.8252192469499985 87 AT5G27560 Domain of unknown function (DUF1995) 0.8249021931166669 88 AT5G54600 Translation protein SH3-like family protein 0.8243664237516242 89 AT5G30510 ribosomal protein S1 RPS1, ARRPS1 0.8242729594452026 90 AT1G18730 NDH dependent flow 6 NDF6 0.8225476207598974 91 AT5G16710 dehydroascorbate reductase 1 DHAR3 0.8216210599428868 92 AT3G46780 plastid transcriptionally active 16 PTAC16 0.8201204599148141 93 AT4G37925 subunit NDH-M of NAD(P)H:plastoquinone dehydrogenase complex NDH-M 0.8181534410984909 94 AT2G17695 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1990 (InterPro:IPR018960); Has 259 Blast hits to 259 proteins in 120 species: Archae - 0; Bacteria - 197; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). 0.8181123902083306 95 AT5G17170 rubredoxin family protein ENH1 0.817445941962242 96 AT1G01080 RNA-binding (RRM/RBD/RNP motifs) family protein 0.8171379534012893 97 AT3G61080 Protein kinase superfamily protein 0.8168535619330056 98 AT2G32500 Stress responsive alpha-beta barrel domain protein 0.8154663636225034 100